RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 CST7O76096 145 aa13.3□□□□□ -0.28
HLA-A-208ENST00000496081 COX6B1P14854 86 aa13.3□□□□□ -0.28
HLA-A-208ENST00000496081 S100A1P23297 94 aa13.3□□□□□ -0.28
HLA-A-208ENST00000496081 IL3RAP26951 378 aa13.3□□□□□ -0.28
HLA-A-208ENST00000496081 PDLIM4P50479 330 aa13.3□□□□□ -0.28
HLA-A-208ENST00000496081 OR2B8PP59922 312 aa13.3□□□□□ -0.28
HLA-A-208ENST00000496081 EIF5AP63241 154 aaKnown RBP13.3□□□□□ -0.28
HLA-A-208ENST00000496081 RELBQ01201 579 aa13.3□□□□□ -0.28
HLA-A-208ENST00000496081 POU2AF1Q16633 256 aa13.3□□□□□ -0.28
HLA-A-208ENST00000496081 OR4A47Q6IF82 309 aa13.3□□□□□ -0.28
HLA-A-208ENST00000496081 UBAC2Q8NBM4 344 aa13.3□□□□□ -0.28
HLA-A-208ENST00000496081 BEND2Q8NDZ0 799 aa13.3□□□□□ -0.28
HLA-A-208ENST00000496081 TACC2O95359 2948 aa13.3□□□□□ -0.28
HLA-A-208ENST00000496081 LINC00862A6NCI5 91 aa13.3□□□□□ -0.28
HLA-A-208ENST00000496081 M0R1W7 72 aa13.3□□□□□ -0.28
HLA-A-208ENST00000496081 HRASP01112 189 aa13.3□□□□□ -0.28
HLA-A-208ENST00000496081 APOA2P02652 100 aa13.3□□□□□ -0.28
HLA-A-208ENST00000496081 COX7A1P24310 79 aa13.3□□□□□ -0.28
HLA-A-208ENST00000496081 LMO4P61968 165 aa13.3□□□□□ -0.28
HLA-A-208ENST00000496081 TAGLNQ01995 201 aaKnown RBP13.3□□□□□ -0.28
HLA-A-208ENST00000496081 BAXQ07812 192 aa13.3□□□□□ -0.28
HLA-A-208ENST00000496081 TGIF2LXQ8IUE1 241 aa13.3□□□□□ -0.28
HLA-A-208ENST00000496081 OR4A16Q8NH70 328 aa13.3□□□□□ -0.28
HLA-A-208ENST00000496081 CLDND2Q8NHS1 167 aa13.3□□□□□ -0.28
HLA-A-208ENST00000496081 SRRM4A7MD48 611 aaKnown RBP13.29□□□□□ -0.28
HLA-A-208ENST00000496081 BUB1B-PAK6H3BSN5 160 aa13.29□□□□□ -0.28
HLA-A-208ENST00000496081 RRASP10301 218 aa13.29□□□□□ -0.28
HLA-A-208ENST00000496081 DYNLT3P51808 116 aa13.29□□□□□ -0.28
HLA-A-208ENST00000496081 TMEM267Q0VDI3 215 aaPredicted RBP13.29□□□□□ -0.28
HLA-A-208ENST00000496081 PNKDQ8N490 385 aa13.29□□□□□ -0.28
HLA-A-208ENST00000496081 TMEM217Q8N7C4 229 aa13.29□□□□□ -0.28
HLA-A-208ENST00000496081 OR5C1Q8NGR4 320 aa13.29□□□□□ -0.28
HLA-A-208ENST00000496081 TMED6Q8WW62 240 aa13.29□□□□□ -0.28
HLA-A-208ENST00000496081 ZDHHC16Q969W1 377 aa13.29□□□□□ -0.28
HLA-A-208ENST00000496081 SLC25A32Q9H2D1 315 aa13.29□□□□□ -0.28
HLA-A-208ENST00000496081 SIRT7Q9NRC8 400 aa13.29□□□□□ -0.28
HLA-A-208ENST00000496081 H7C2Y5 167 aa13.28□□□□□ -0.28
HLA-A-208ENST00000496081 IL6RP08887 468 aaPredicted RBP13.28□□□□□ -0.28
HLA-A-208ENST00000496081 SULT1A1P50225 295 aa13.28□□□□□ -0.28
HLA-A-208ENST00000496081 CLINT1Q14677 625 aa13.28□□□□□ -0.28
HLA-A-208ENST00000496081 SPINK9Q5DT21 86 aa13.28□□□□□ -0.28
HLA-A-208ENST00000496081 STX12Q86Y82 276 aa13.28□□□□□ -0.28
HLA-A-208ENST00000496081 OR4P4Q8NGL7 312 aa13.28□□□□□ -0.28
HLA-A-208ENST00000496081 OSR1Q8TAX0 266 aaPredicted RBP13.28□□□□□ -0.28
HLA-A-208ENST00000496081 DTD1Q8TEA8 209 aa13.28□□□□□ -0.28
HLA-A-208ENST00000496081 PCGF1Q9BSM1 259 aa13.28□□□□□ -0.28
HLA-A-208ENST00000496081 ARV1Q9H2C2 271 aa13.28□□□□□ -0.28
HLA-A-208ENST00000496081 DOPEY2Q9Y3R5 2298 aa13.28□□□□□ -0.28
HLA-A-208ENST00000496081 BORCS7-ASMTA0A0B4J1R7 106 aa13.27□□□□□ -0.28
HLA-A-208ENST00000496081 COL8A1P27658 744 aa13.27□□□□□ -0.28
HLA-A-208ENST00000496081 LCN2P80188 198 aa13.27□□□□□ -0.28
HLA-A-208ENST00000496081 PAX2Q02962 417 aa13.27□□□□□ -0.28
HLA-A-208ENST00000496081 TMEM177Q53S58 311 aa13.27□□□□□ -0.28
HLA-A-208ENST00000496081 SPANXN5Q5MJ07 72 aa13.27□□□□□ -0.28
HLA-A-208ENST00000496081 ZNF429Q86V71 674 aa13.27□□□□□ -0.28
HLA-A-208ENST00000496081 PDPNQ86YL7 162 aa13.27□□□□□ -0.28
HLA-A-208ENST00000496081 LHX4Q969G2 390 aa13.27□□□□□ -0.28
HLA-A-208ENST00000496081 SPG11Q96JI7 2443 aa13.27□□□□□ -0.28
HLA-A-208ENST00000496081 TET2Q6N021 2002 aaPredicted RBP13.27□□□□□ -0.29
HLA-A-208ENST00000496081 C15orf61A6NNL5 157 aa13.27□□□□□ -0.29
HLA-A-208ENST00000496081 CEBPZOSA8MTT3 80 aa13.27□□□□□ -0.29
HLA-A-208ENST00000496081 A8MXK9 166 aa13.27□□□□□ -0.29
HLA-A-208ENST00000496081 SHOXO15266 292 aa13.27□□□□□ -0.29
HLA-A-208ENST00000496081 ENSAO43768 121 aaKnown RBP13.27□□□□□ -0.29
HLA-A-208ENST00000496081 IFNA17P01571 189 aa13.27□□□□□ -0.29
HLA-A-208ENST00000496081 METTL15P1P0C7V9 234 aa13.27□□□□□ -0.29
HLA-A-208ENST00000496081 PRTN3P24158 256 aa13.27□□□□□ -0.29
HLA-A-208ENST00000496081 ATP5J2P56134 94 aa13.27□□□□□ -0.29
HLA-A-208ENST00000496081 C1orf122Q6ZSJ8 110 aa13.27□□□□□ -0.29
HLA-A-208ENST00000496081 PDZD9Q8IXQ8 264 aa13.27□□□□□ -0.29
HLA-A-208ENST00000496081 OR11H6Q8NGC7 330 aa13.27□□□□□ -0.29
HLA-A-208ENST00000496081 OR52E5Q8NH55 327 aa13.27□□□□□ -0.29
HLA-A-208ENST00000496081 FAM168AQ92567 244 aa13.27□□□□□ -0.29
HLA-A-208ENST00000496081 NRGNQ92686 78 aa13.27□□□□□ -0.29
HLA-A-208ENST00000496081 FLYWCH2Q96CP2 140 aaKnown RBP13.27□□□□□ -0.29
HLA-A-208ENST00000496081 AUP1Q9Y679 476 aa13.27□□□□□ -0.29
HLA-A-208ENST00000496081 CRYBG3Q68DQ2 2970 aa13.27□□□□□ -0.29
HLA-A-208ENST00000496081 SPCS3P61009 180 aa13.26□□□□□ -0.29
HLA-A-208ENST00000496081 PDLIM3Q53GG5 364 aaPredicted RBP13.26□□□□□ -0.29
HLA-A-208ENST00000496081 TMEM14EPQ6UXP3 125 aa13.26□□□□□ -0.29
HLA-A-208ENST00000496081 HAPLN4Q86UW8 402 aa13.26□□□□□ -0.29
HLA-A-208ENST00000496081 KIR3DL3Q8N743 410 aa13.26□□□□□ -0.29
HLA-A-208ENST00000496081 MARVELD3Q96A59 401 aa13.26□□□□□ -0.29
HLA-A-208ENST00000496081 CXorf58Q96LI9 332 aa13.26□□□□□ -0.29
HLA-A-208ENST00000496081 HARBI1Q96MB7 349 aa13.26□□□□□ -0.29
HLA-A-208ENST00000496081 CIB3Q96Q77 187 aaPredicted RBP13.26□□□□□ -0.29
HLA-A-208ENST00000496081 AIFM2Q9BRQ8 373 aa13.26□□□□□ -0.29
HLA-A-208ENST00000496081 GINS3Q9BRX5 216 aa13.26□□□□□ -0.29
HLA-A-208ENST00000496081 TMEM14BQ9NUH8 114 aa13.26□□□□□ -0.29
HLA-A-208ENST00000496081 WASHC3Q9Y3C0 194 aa13.26□□□□□ -0.29
HLA-A-208ENST00000496081 AMMECR1Q9Y4X0 333 aaPredicted RBP13.26□□□□□ -0.29
HLA-A-208ENST00000496081 ASH1LQ9NR48 2969 aaKnown RBP13.26□□□□□ -0.29
HLA-A-208ENST00000496081 LY6LH3BQJ8 138 aa13.25□□□□□ -0.29
HLA-A-208ENST00000496081 FBXO24O75426 580 aa13.25□□□□□ -0.29
HLA-A-208ENST00000496081 FAM157CP0CG43 387 aa13.25□□□□□ -0.29
HLA-A-208ENST00000496081 SAA1P0DJI8 122 aaPredicted RBP13.25□□□□□ -0.29
HLA-A-208ENST00000496081 MC5RP33032 325 aa13.25□□□□□ -0.29
HLA-A-208ENST00000496081 ARL16Q0P5N6 197 aa13.25□□□□□ -0.29
HLA-A-208ENST00000496081 ZNF266Q14584 549 aa13.25□□□□□ -0.29
HLA-A-208ENST00000496081 EIF5AL1Q6IS14 154 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms