RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 CCDC140Q96MF4 163 aa9.93□□□□□ -0.82
COL1A1-209ENST00000495677 SPAG8Q99932 426 aaPredicted RBP9.93□□□□□ -0.82
COL1A1-209ENST00000495677 HDHD3Q9BSH5 251 aaPredicted RBP9.93□□□□□ -0.82
COL1A1-209ENST00000495677 LPAR5Q9H1C0 372 aa9.93□□□□□ -0.82
COL1A1-209ENST00000495677 ZNF430Q9H8G1 570 aaPredicted RBP9.93□□□□□ -0.82
COL1A1-209ENST00000495677 FBXL7Q9UJT9 491 aa9.93□□□□□ -0.82
COL1A1-209ENST00000495677 A0A0A6YYD4 124 aa9.92□□□□□ -0.82
COL1A1-209ENST00000495677 NPIPB5A8MRT5 1133 aa9.92□□□□□ -0.82
COL1A1-209ENST00000495677 FOXI3A8MTJ6 420 aaPredicted RBP9.92□□□□□ -0.82
COL1A1-209ENST00000495677 TRDCB7Z8K6 153 aa9.92□□□□□ -0.82
COL1A1-209ENST00000495677 ACTL6BO94805 426 aa9.92□□□□□ -0.82
COL1A1-209ENST00000495677 IFNA4P05014 189 aa9.92□□□□□ -0.82
COL1A1-209ENST00000495677 PSMB6P28072 239 aa9.92□□□□□ -0.82
COL1A1-209ENST00000495677 TMEM50BP56557 158 aa9.92□□□□□ -0.82
COL1A1-209ENST00000495677 BTNL8Q6UX41 500 aa9.92□□□□□ -0.82
COL1A1-209ENST00000495677 CLEC19AQ6UXS0 136 aa9.92□□□□□ -0.82
COL1A1-209ENST00000495677 C2CD4CQ8TF44 421 aa9.92□□□□□ -0.82
COL1A1-209ENST00000495677 GALNT14Q96FL9 552 aa9.92□□□□□ -0.82
COL1A1-209ENST00000495677 FANCD2OSQ96PS1 177 aa9.92□□□□□ -0.82
COL1A1-209ENST00000495677 OR2D2Q9H210 308 aa9.92□□□□□ -0.82
COL1A1-209ENST00000495677 C5orf66Q9H5L9 145 aa9.92□□□□□ -0.82
COL1A1-209ENST00000495677 MAP6D1Q9H9H5 199 aa9.92□□□□□ -0.82
COL1A1-209ENST00000495677 C12orf4Q9NQ89 552 aa9.92□□□□□ -0.82
COL1A1-209ENST00000495677 ZNF320A2RRD8 509 aa9.91□□□□□ -0.82
COL1A1-209ENST00000495677 TSPAN4O14817 238 aa9.91□□□□□ -0.82
COL1A1-209ENST00000495677 SOCS1O15524 211 aa9.91□□□□□ -0.82
COL1A1-209ENST00000495677 CRYGCP07315 174 aa9.91□□□□□ -0.82
COL1A1-209ENST00000495677 DUTP33316 252 aaKnown RBP9.91□□□□□ -0.82
COL1A1-209ENST00000495677 IDO2Q6ZQW0 420 aa9.91□□□□□ -0.82
COL1A1-209ENST00000495677 GVQW1Q8N7I0 195 aa9.91□□□□□ -0.82
COL1A1-209ENST00000495677 C11orf45Q8TAV5 145 aa9.91□□□□□ -0.82
COL1A1-209ENST00000495677 PYDC1Q8WXC3 89 aa9.91□□□□□ -0.82
COL1A1-209ENST00000495677 PHYHIPQ92561 330 aa9.91□□□□□ -0.82
COL1A1-209ENST00000495677 GGHQ92820 318 aa9.91□□□□□ -0.82
COL1A1-209ENST00000495677 C5orf30Q96GV9 206 aa9.91□□□□□ -0.82
COL1A1-209ENST00000495677 TMEM80Q96HE8 168 aa9.91□□□□□ -0.82
COL1A1-209ENST00000495677 URM1Q9BTM9 101 aaKnown RBP9.91□□□□□ -0.82
COL1A1-209ENST00000495677 C11orf68Q9H3H3 251 aaKnown RBP9.91□□□□□ -0.82
COL1A1-209ENST00000495677 APLNQ9ULZ1 77 aa9.91□□□□□ -0.82
COL1A1-209ENST00000495677 SELENOKQ9Y6D0 94 aa9.91□□□□□ -0.82
COL1A1-209ENST00000495677 TRBV6-7A0A0A0MS04 114 aa9.9□□□□□ -0.82
COL1A1-209ENST00000495677 TRBV7-1A0A0A6YYK4 115 aa9.9□□□□□ -0.82
COL1A1-209ENST00000495677 TEX22C9J3V5 150 aa9.9□□□□□ -0.82
COL1A1-209ENST00000495677 CRYZL1O95825 349 aa9.9□□□□□ -0.82
COL1A1-209ENST00000495677 CELP19835 753 aa9.9□□□□□ -0.82
COL1A1-209ENST00000495677 RBMS2Q15434 407 aaKnown RBP9.9□□□□□ -0.82
COL1A1-209ENST00000495677 CEACAM19Q7Z692 300 aa9.9□□□□□ -0.82
COL1A1-209ENST00000495677 LRRTM1Q86UE6 522 aa9.9□□□□□ -0.82
COL1A1-209ENST00000495677 EEF1AKMT3Q96AZ1 226 aa9.9□□□□□ -0.82
COL1A1-209ENST00000495677 FYTTD1Q96QD9 318 aaKnown RBP9.9□□□□□ -0.82
COL1A1-209ENST00000495677 CMSS1Q9BQ75 279 aaKnown RBP9.9□□□□□ -0.82
COL1A1-209ENST00000495677 CABLES2Q9BTV7 478 aa9.9□□□□□ -0.82
COL1A1-209ENST00000495677 C9orf16Q9BUW7 83 aa9.9□□□□□ -0.82
COL1A1-209ENST00000495677 SLC2A9Q9NRM0 540 aa9.9□□□□□ -0.82
COL1A1-209ENST00000495677 FAT2Q9NYQ8 4349 aa9.9□□□□□ -0.82
COL1A1-209ENST00000495677 EFCAB10A6NFE3 127 aa9.89□□□□□ -0.83
COL1A1-209ENST00000495677 LINC00473A8K010 186 aa9.89□□□□□ -0.83
COL1A1-209ENST00000495677 SAA1P0DJI8 122 aaPredicted RBP9.89□□□□□ -0.83
COL1A1-209ENST00000495677 MYOD1P15172 320 aa9.89□□□□□ -0.83
COL1A1-209ENST00000495677 HIST1H1BP16401 226 aaKnown RBP9.89□□□□□ -0.83
COL1A1-209ENST00000495677 ZNF585BQ52M93 769 aa9.89□□□□□ -0.83
COL1A1-209ENST00000495677 UNQ9165/PRO28630Q6UXU0 137 aa9.89□□□□□ -0.83
COL1A1-209ENST00000495677 SETD9Q8NE22 299 aa9.89□□□□□ -0.83
COL1A1-209ENST00000495677 OR10J5Q8NHC4 309 aa9.89□□□□□ -0.83
COL1A1-209ENST00000495677 FBLIM1Q8WUP2 373 aa9.89□□□□□ -0.83
COL1A1-209ENST00000495677 RARRES2Q99969 163 aa9.89□□□□□ -0.83
COL1A1-209ENST00000495677 OR51E2Q9H255 320 aa9.89□□□□□ -0.83
COL1A1-209ENST00000495677 DNAH17Q9UFH2 4485 aa9.89□□□□□ -0.83
COL1A1-209ENST00000495677 DNAH2Q9P225 4427 aa9.88□□□□□ -0.83
COL1A1-209ENST00000495677 PNMA8CA0A1B0GUJ8 204 aa9.88□□□□□ -0.83
COL1A1-209ENST00000495677 HMX3A6NHT5 357 aa9.88□□□□□ -0.83
COL1A1-209ENST00000495677 E7EUB6 86 aa9.88□□□□□ -0.83
COL1A1-209ENST00000495677 FABP7O15540 132 aa9.88□□□□□ -0.83
COL1A1-209ENST00000495677 DHFRP00374 187 aa9.88□□□□□ -0.83
COL1A1-209ENST00000495677 CLEC3BP05452 202 aa9.88□□□□□ -0.83
COL1A1-209ENST00000495677 CDK1P06493 297 aa9.88□□□□□ -0.83
COL1A1-209ENST00000495677 IL6RP08887 468 aaPredicted RBP9.88□□□□□ -0.83
COL1A1-209ENST00000495677 ZNF735P0CB33 412 aa9.88□□□□□ -0.83
COL1A1-209ENST00000495677 CTRB1P17538 263 aa9.88□□□□□ -0.83
COL1A1-209ENST00000495677 ADMP35318 185 aa9.88□□□□□ -0.83
COL1A1-209ENST00000495677 MAS1LP35410 378 aa9.88□□□□□ -0.83
COL1A1-209ENST00000495677 NANOS2P60321 138 aaKnown RBP9.88□□□□□ -0.83
COL1A1-209ENST00000495677 IRF3Q14653 427 aa9.88□□□□□ -0.83
COL1A1-209ENST00000495677 SSX1Q16384 188 aa9.88□□□□□ -0.83
COL1A1-209ENST00000495677 ODF3L2Q3SX64 289 aa9.88□□□□□ -0.83
COL1A1-209ENST00000495677 ACSM3Q53FZ2 586 aa9.88□□□□□ -0.83
COL1A1-209ENST00000495677 C10orf55Q5SWW7 151 aa9.88□□□□□ -0.83
COL1A1-209ENST00000495677 CTRB2Q6GPI1 263 aa9.88□□□□□ -0.83
COL1A1-209ENST00000495677 ZFP1Q6P2D0 407 aa9.88□□□□□ -0.83
COL1A1-209ENST00000495677 MS4A15Q8N5U1 240 aa9.88□□□□□ -0.83
COL1A1-209ENST00000495677 CXorf58Q96LI9 332 aa9.88□□□□□ -0.83
COL1A1-209ENST00000495677 CENPOQ9BU64 300 aa9.88□□□□□ -0.83
COL1A1-209ENST00000495677 PECRQ9BY49 303 aa9.88□□□□□ -0.83
COL1A1-209ENST00000495677 CSTL1Q9H114 145 aa9.88□□□□□ -0.83
COL1A1-209ENST00000495677 UBQLN2Q9UHD9 624 aa9.88□□□□□ -0.83
COL1A1-209ENST00000495677 UFC1Q9Y3C8 167 aa9.88□□□□□ -0.83
COL1A1-209ENST00000495677 C11orf94C9JXX5 98 aa9.87□□□□□ -0.83
COL1A1-209ENST00000495677 IGHV3-23P01764 117 aa9.87□□□□□ -0.83
COL1A1-209ENST00000495677 CD3GP09693 182 aa9.87□□□□□ -0.83
COL1A1-209ENST00000495677 GSTT2P0CG29 244 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms