RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	DYNAP	Q8N1N2	210 aa		10.88	□□□□□ -0.67
APTX-231	ENST00000494973	DMBX1	Q8NFW5	382 aa		10.88	□□□□□ -0.67
APTX-231	ENST00000494973	ZNF418	Q8TF45	676 aa	Predicted RBP	10.88	□□□□□ -0.67
APTX-231	ENST00000494973	C17orf50	Q8WW18	174 aa		10.88	□□□□□ -0.67
APTX-231	ENST00000494973	ASB13	Q8WXK3	278 aa		10.88	□□□□□ -0.67
APTX-231	ENST00000494973	R3HDM4	Q96D70	268 aa		10.88	□□□□□ -0.67
APTX-231	ENST00000494973	EAF1	Q96JC9	268 aa	Predicted RBP	10.88	□□□□□ -0.67
APTX-231	ENST00000494973	RHOV	Q96L33	236 aa		10.88	□□□□□ -0.67
APTX-231	ENST00000494973	TCF19	Q9Y242	345 aa		10.88	□□□□□ -0.67
APTX-231	ENST00000494973	MMP24	Q9Y5R2	645 aa		10.88	□□□□□ -0.67
APTX-231	ENST00000494973	F8	P00451	2351 aa		10.88	□□□□□ -0.67
APTX-231	ENST00000494973		A0A0A6YYJ9	748 aa		10.87	□□□□□ -0.67
APTX-231	ENST00000494973		H3BUX3	64 aa		10.87	□□□□□ -0.67
APTX-231	ENST00000494973	NBR2	O15453	112 aa		10.87	□□□□□ -0.67
APTX-231	ENST00000494973	FGF16	O43320	207 aa		10.87	□□□□□ -0.67
APTX-231	ENST00000494973	OR2F2	O95006	317 aa		10.87	□□□□□ -0.67
APTX-231	ENST00000494973	FAM157C	P0CG43	387 aa		10.87	□□□□□ -0.67
APTX-231	ENST00000494973	SLC25A6	P12236	298 aa		10.87	□□□□□ -0.67
APTX-231	ENST00000494973	UBE2K	P61086	200 aa		10.87	□□□□□ -0.67
APTX-231	ENST00000494973	MMD	Q15546	238 aa		10.87	□□□□□ -0.67
APTX-231	ENST00000494973	TUSC1	Q2TAM9	212 aa		10.87	□□□□□ -0.67
APTX-231	ENST00000494973	IL17REL	Q6ZVW7	336 aa		10.87	□□□□□ -0.67
APTX-231	ENST00000494973	H2BFWT	Q7Z2G1	175 aa		10.87	□□□□□ -0.67
APTX-231	ENST00000494973	SELENOH	Q8IZQ5	122 aa	Known RBP	10.87	□□□□□ -0.67
APTX-231	ENST00000494973	SLC35G3	Q8N808	338 aa		10.87	□□□□□ -0.67
APTX-231	ENST00000494973	TEX45	Q8NA69	505 aa		10.87	□□□□□ -0.67
APTX-231	ENST00000494973	NPB	Q8NG41	125 aa		10.87	□□□□□ -0.67
APTX-231	ENST00000494973	OR52B4	Q8NGK2	314 aa		10.87	□□□□□ -0.67
APTX-231	ENST00000494973	MED28	Q9H204	178 aa		10.87	□□□□□ -0.67
APTX-231	ENST00000494973	BET1L	Q9NYM9	111 aa		10.87	□□□□□ -0.67
APTX-231	ENST00000494973	MOB4	Q9Y3A3	225 aa		10.87	□□□□□ -0.67
APTX-231	ENST00000494973	SON	P18583	2426 aa	Known RBP	10.86	□□□□□ -0.67
APTX-231	ENST00000494973	SNAPC5	O75971	98 aa		10.86	□□□□□ -0.67
APTX-231	ENST00000494973	OR2A4	O95047	310 aa		10.86	□□□□□ -0.67
APTX-231	ENST00000494973	IER3	P46695	156 aa		10.86	□□□□□ -0.67
APTX-231	ENST00000494973	BRWD1-AS2	P59051	145 aa		10.86	□□□□□ -0.67
APTX-231	ENST00000494973	ANKRD55	Q3KP44	614 aa		10.86	□□□□□ -0.67
APTX-231	ENST00000494973	BCL6B	Q8N143	479 aa	Predicted RBP	10.86	□□□□□ -0.67
APTX-231	ENST00000494973		Q8N6K4	173 aa		10.86	□□□□□ -0.67
APTX-231	ENST00000494973	SEC22A	Q96IW7	307 aa		10.86	□□□□□ -0.67
APTX-231	ENST00000494973	RBM14	Q96PK6	669 aa	Known RBP	10.86	□□□□□ -0.67
APTX-231	ENST00000494973	OR2A7	Q96R45	310 aa		10.86	□□□□□ -0.67
APTX-231	ENST00000494973	FKBP11	Q9NYL4	201 aa		10.86	□□□□□ -0.67
APTX-231	ENST00000494973	VPREB3	Q9UKI3	123 aa		10.86	□□□□□ -0.67
APTX-231	ENST00000494973	HIVEP1	P15822	2718 aa		10.86	□□□□□ -0.67
APTX-231	ENST00000494973		A0A0B4J293	547 aa		10.85	□□□□□ -0.67
APTX-231	ENST00000494973		A0A1B0GU03	582 aa		10.85	□□□□□ -0.67
APTX-231	ENST00000494973	DBX1	A6NMT0	343 aa		10.85	□□□□□ -0.67
APTX-231	ENST00000494973	CYSRT1	A8MQ03	144 aa		10.85	□□□□□ -0.67
APTX-231	ENST00000494973	CLDN34	H7C241	214 aa		10.85	□□□□□ -0.67
APTX-231	ENST00000494973	RRH	O14718	337 aa		10.85	□□□□□ -0.67
APTX-231	ENST00000494973	CRLF1	O75462	422 aa		10.85	□□□□□ -0.67
APTX-231	ENST00000494973	KBTBD11	O94819	623 aa		10.85	□□□□□ -0.67
APTX-231	ENST00000494973	NDUFA3	O95167	84 aa		10.85	□□□□□ -0.67
APTX-231	ENST00000494973	KRAS	P01116	189 aa		10.85	□□□□□ -0.67
APTX-231	ENST00000494973	TRAPPC2	P0DI81	140 aa		10.85	□□□□□ -0.67
APTX-231	ENST00000494973	TRAPPC2B	P0DI82	140 aa		10.85	□□□□□ -0.67
APTX-231	ENST00000494973	SAA1	P0DJI8	122 aa	Predicted RBP	10.85	□□□□□ -0.67
APTX-231	ENST00000494973	HLA-G	P17693	338 aa		10.85	□□□□□ -0.67
APTX-231	ENST00000494973	LINC00205	P59089	165 aa		10.85	□□□□□ -0.67
APTX-231	ENST00000494973	RPL15	P61313	204 aa	Known RBP	10.85	□□□□□ -0.67
APTX-231	ENST00000494973	RRAS2	P62070	204 aa	Predicted RBP	10.85	□□□□□ -0.67
APTX-231	ENST00000494973	PLGLA	Q15195	96 aa		10.85	□□□□□ -0.67
APTX-231	ENST00000494973	GSG1L	Q6UXU4	331 aa		10.85	□□□□□ -0.67
APTX-231	ENST00000494973	MMD2	Q8IY49	270 aa		10.85	□□□□□ -0.67
APTX-231	ENST00000494973	UXS1	Q8NBZ7	420 aa		10.85	□□□□□ -0.67
APTX-231	ENST00000494973	C22orf15	Q8WYQ4	148 aa		10.85	□□□□□ -0.67
APTX-231	ENST00000494973	TMEM140	Q9NV12	185 aa		10.85	□□□□□ -0.67
APTX-231	ENST00000494973	COA4	Q9NYJ1	87 aa		10.85	□□□□□ -0.67
APTX-231	ENST00000494973	PRND	Q9UKY0	176 aa		10.85	□□□□□ -0.67
APTX-231	ENST00000494973		A6NDX4	124 aa		10.84	□□□□□ -0.67
APTX-231	ENST00000494973	NCBP2L	A6PVI3	153 aa	Known RBP	10.84	□□□□□ -0.67
APTX-231	ENST00000494973	INAFM1	C9JVW0	142 aa		10.84	□□□□□ -0.67
APTX-231	ENST00000494973	ACTL6B	O94805	426 aa		10.84	□□□□□ -0.67
APTX-231	ENST00000494973	SULT1A3	P0DMM9	295 aa		10.84	□□□□□ -0.67
APTX-231	ENST00000494973	SULT1A4	P0DMN0	295 aa		10.84	□□□□□ -0.67
APTX-231	ENST00000494973	MAS1L	P35410	378 aa		10.84	□□□□□ -0.67
APTX-231	ENST00000494973	G6PC	P35575	357 aa		10.84	□□□□□ -0.67
APTX-231	ENST00000494973	CYCS	P99999	105 aa	Known RBP	10.84	□□□□□ -0.67
APTX-231	ENST00000494973	PSG5	Q15238	335 aa		10.84	□□□□□ -0.67
APTX-231	ENST00000494973	NMS	Q5H8A3	153 aa		10.84	□□□□□ -0.67
APTX-231	ENST00000494973	OR4A47	Q6IF82	309 aa		10.84	□□□□□ -0.67
APTX-231	ENST00000494973	FOXRED2	Q8IWF2	684 aa		10.84	□□□□□ -0.67
APTX-231	ENST00000494973	MRPL41	Q8IXM3	137 aa	Known RBP	10.84	□□□□□ -0.67
APTX-231	ENST00000494973	PUSL1	Q8N0Z8	303 aa	Known RBP	10.84	□□□□□ -0.67
APTX-231	ENST00000494973	SIGLECL1	Q8N7X8	197 aa		10.84	□□□□□ -0.67
APTX-231	ENST00000494973	OR5M8	Q8NGP6	311 aa		10.84	□□□□□ -0.67
APTX-231	ENST00000494973	OR4A16	Q8NH70	328 aa		10.84	□□□□□ -0.67
APTX-231	ENST00000494973	LHFPL5	Q8TAF8	219 aa		10.84	□□□□□ -0.67
APTX-231	ENST00000494973	TMEM167A	Q8TBQ9	72 aa		10.84	□□□□□ -0.67
APTX-231	ENST00000494973	RASL11B	Q9BPW5	248 aa		10.84	□□□□□ -0.67
APTX-231	ENST00000494973	SLC25A33	Q9BSK2	321 aa		10.84	□□□□□ -0.67
APTX-231	ENST00000494973	PDCD10	Q9BUL8	212 aa		10.84	□□□□□ -0.67
APTX-231	ENST00000494973	GSX1	Q9H4S2	264 aa	Predicted RBP	10.84	□□□□□ -0.67
APTX-231	ENST00000494973	ZFP57	Q9NU63	452 aa		10.84	□□□□□ -0.67
APTX-231	ENST00000494973	METTL1	Q9UBP6	276 aa	Known RBP	10.84	□□□□□ -0.67
APTX-231	ENST00000494973	CELSR1	Q9NYQ6	3014 aa		10.84	□□□□□ -0.67
APTX-231	ENST00000494973	ZNF469	Q96JG9	3925 aa	Predicted RBP	10.83	□□□□□ -0.68
APTX-231	ENST00000494973	MAST4	O15021	2626 aa		10.83	□□□□□ -0.68
APTX-231	ENST00000494973	MDFIC2	A0A1B0GVS7	189 aa		10.83	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms