RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 XRCC3O43542 346 aa12□□□□□ -0.49
LIMS2-216ENST00000494613 SAP30O75446 220 aa12□□□□□ -0.49
LIMS2-216ENST00000494613 TNFAIP8O95379 198 aa12□□□□□ -0.49
LIMS2-216ENST00000494613 AADACP22760 399 aa12□□□□□ -0.49
LIMS2-216ENST00000494613 ARPC4P59998 168 aa12□□□□□ -0.49
LIMS2-216ENST00000494613 OR2B11Q5JQS5 317 aa12□□□□□ -0.49
LIMS2-216ENST00000494613 KCTD9Q7L273 389 aa12□□□□□ -0.49
LIMS2-216ENST00000494613 GPHA2Q96T91 129 aa12□□□□□ -0.49
LIMS2-216ENST00000494613 PHB2Q99623 299 aa12□□□□□ -0.49
LIMS2-216ENST00000494613 TINAGL1Q9GZM7 467 aaPredicted RBP12□□□□□ -0.49
LIMS2-216ENST00000494613 ZNF430Q9H8G1 570 aaPredicted RBP12□□□□□ -0.49
LIMS2-216ENST00000494613 CCL28Q9NRJ3 127 aa12□□□□□ -0.49
LIMS2-216ENST00000494613 SAA1P0DJI8 122 aaPredicted RBP11.99□□□□□ -0.49
LIMS2-216ENST00000494613 CBX5P45973 191 aa11.99□□□□□ -0.49
LIMS2-216ENST00000494613 CDK10Q15131 360 aa11.99□□□□□ -0.49
LIMS2-216ENST00000494613 C11orf87Q6NUJ2 197 aa11.99□□□□□ -0.49
LIMS2-216ENST00000494613 ZNF66Q6ZN08 573 aa11.99□□□□□ -0.49
LIMS2-216ENST00000494613 OVCH2Q7RTZ1 564 aa11.99□□□□□ -0.49
LIMS2-216ENST00000494613 VKORC1L1Q8N0U8 176 aa11.99□□□□□ -0.49
LIMS2-216ENST00000494613 TCTEX1D2Q8WW35 142 aa11.99□□□□□ -0.49
LIMS2-216ENST00000494613 GIMAP1Q8WWP7 306 aa11.99□□□□□ -0.49
LIMS2-216ENST00000494613 SRSF12Q8WXF0 261 aaKnown RBP11.99□□□□□ -0.49
LIMS2-216ENST00000494613 ACOT12Q8WYK0 555 aa11.99□□□□□ -0.49
LIMS2-216ENST00000494613 VCX3AQ9NNX9 186 aa11.99□□□□□ -0.49
LIMS2-216ENST00000494613 COA4Q9NYJ1 87 aa11.99□□□□□ -0.49
LIMS2-216ENST00000494613 TAS2R8Q9NYW2 309 aa11.99□□□□□ -0.49
LIMS2-216ENST00000494613 MRPS7Q9Y2R9 242 aaKnown RBP11.99□□□□□ -0.49
LIMS2-216ENST00000494613 MEIS3P1A6NDR6 274 aa11.98□□□□□ -0.49
LIMS2-216ENST00000494613 RBMXL2O75526 392 aaKnown RBP11.98□□□□□ -0.49
LIMS2-216ENST00000494613 ACTL6BO94805 426 aa11.98□□□□□ -0.49
LIMS2-216ENST00000494613 LY86O95711 162 aa11.98□□□□□ -0.49
LIMS2-216ENST00000494613 KLF5Q13887 457 aaPredicted RBP11.98□□□□□ -0.49
LIMS2-216ENST00000494613 ZNF343Q6P1L6 599 aa11.98□□□□□ -0.49
LIMS2-216ENST00000494613 MMD2Q8IY49 270 aa11.98□□□□□ -0.49
LIMS2-216ENST00000494613 ADAD2Q8NCV1 583 aaKnown RBP11.98□□□□□ -0.49
LIMS2-216ENST00000494613 OR5AP2Q8NGF4 316 aa11.98□□□□□ -0.49
LIMS2-216ENST00000494613 SECTM1Q8WVN6 248 aa11.98□□□□□ -0.49
LIMS2-216ENST00000494613 USMG5Q96IX5 58 aa11.98□□□□□ -0.49
LIMS2-216ENST00000494613 OR4C12Q96R67 309 aa11.98□□□□□ -0.49
LIMS2-216ENST00000494613 TNCP24821 2201 aa11.98□□□□□ -0.49
LIMS2-216ENST00000494613 TRIM64CA6NLI5 447 aa11.97□□□□□ -0.49
LIMS2-216ENST00000494613 OR2A4O95047 310 aa11.97□□□□□ -0.49
LIMS2-216ENST00000494613 PPYP01298 95 aa11.97□□□□□ -0.49
LIMS2-216ENST00000494613 OR9G9P0C7N8 305 aa11.97□□□□□ -0.49
LIMS2-216ENST00000494613 SPNP16150 400 aa11.97□□□□□ -0.49
LIMS2-216ENST00000494613 ZP3P21754 424 aa11.97□□□□□ -0.49
LIMS2-216ENST00000494613 DEFA5Q01523 94 aa11.97□□□□□ -0.49
LIMS2-216ENST00000494613 TTC9CQ8N5M4 171 aa11.97□□□□□ -0.49
LIMS2-216ENST00000494613 SAMD12Q8N8I0 201 aa11.97□□□□□ -0.49
LIMS2-216ENST00000494613 ZBTB34Q8NCN2 500 aa11.97□□□□□ -0.49
LIMS2-216ENST00000494613 OR4S2Q8NH73 311 aa11.97□□□□□ -0.49
LIMS2-216ENST00000494613 SNAPC3Q92966 411 aa11.97□□□□□ -0.49
LIMS2-216ENST00000494613 OR2A7Q96R45 310 aa11.97□□□□□ -0.49
LIMS2-216ENST00000494613 SPIN2AQ99865 258 aa11.97□□□□□ -0.49
LIMS2-216ENST00000494613 SPIN2BQ9BPZ2 258 aa11.97□□□□□ -0.49
LIMS2-216ENST00000494613 ELOVL1Q9BW60 279 aa11.97□□□□□ -0.49
LIMS2-216ENST00000494613 SLC5A7Q9GZV3 580 aa11.97□□□□□ -0.49
LIMS2-216ENST00000494613 PEF1Q9UBV8 284 aaKnown RBP11.97□□□□□ -0.49
LIMS2-216ENST00000494613 E7EUB6 86 aa11.96□□□□□ -0.49
LIMS2-216ENST00000494613 MPPED1O15442 326 aa11.96□□□□□ -0.49
LIMS2-216ENST00000494613 TNFSF12O43508 249 aa11.96□□□□□ -0.49
LIMS2-216ENST00000494613 PRH1P02810 166 aa11.96□□□□□ -0.49
LIMS2-216ENST00000494613 NHLRC4P0CG21 123 aaPredicted RBP11.96□□□□□ -0.49
LIMS2-216ENST00000494613 RFX2P48378 723 aa11.96□□□□□ -0.49
LIMS2-216ENST00000494613 DYRK1AQ13627 763 aa11.96□□□□□ -0.49
LIMS2-216ENST00000494613 MSMO1Q15800 293 aa11.96□□□□□ -0.49
LIMS2-216ENST00000494613 UBE2NLQ5JXB2 153 aa11.96□□□□□ -0.49
LIMS2-216ENST00000494613 DHRS11Q6UWP2 260 aa11.96□□□□□ -0.49
LIMS2-216ENST00000494613 PUSL1Q8N0Z8 303 aaKnown RBP11.96□□□□□ -0.49
LIMS2-216ENST00000494613 OR13F1Q8NGS4 319 aa11.96□□□□□ -0.49
LIMS2-216ENST00000494613 SLC25A46Q96AG3 418 aa11.96□□□□□ -0.49
LIMS2-216ENST00000494613 FUNDC2Q9BWH2 189 aa11.96□□□□□ -0.49
LIMS2-216ENST00000494613 SORL1Q92673 2214 aa11.95□□□□□ -0.5
LIMS2-216ENST00000494613 TRBV9A0A0B4J1U6 114 aa11.95□□□□□ -0.5
LIMS2-216ENST00000494613 HMX3A6NHT5 357 aa11.95□□□□□ -0.5
LIMS2-216ENST00000494613 CREBL2O60519 120 aaPredicted RBP11.95□□□□□ -0.5
LIMS2-216ENST00000494613 HRASP01112 189 aa11.95□□□□□ -0.5
LIMS2-216ENST00000494613 IL6RP08887 468 aaPredicted RBP11.95□□□□□ -0.5
LIMS2-216ENST00000494613 FXYD4P59646 89 aa11.95□□□□□ -0.5
LIMS2-216ENST00000494613 C10orf55Q5SWW7 151 aa11.95□□□□□ -0.5
LIMS2-216ENST00000494613 VSTM2AQ8TAG5 236 aa11.95□□□□□ -0.5
LIMS2-216ENST00000494613 TMEM167AQ8TBQ9 72 aa11.95□□□□□ -0.5
LIMS2-216ENST00000494613 ASCL2Q99929 193 aa11.95□□□□□ -0.5
LIMS2-216ENST00000494613 AKIP1Q9NQ31 210 aa11.95□□□□□ -0.5
LIMS2-216ENST00000494613 IFT46Q9NQC8 304 aa11.95□□□□□ -0.5
LIMS2-216ENST00000494613 SMAD5-AS1Q9Y6J3 95 aa11.95□□□□□ -0.5
LIMS2-216ENST00000494613 SULT1C2O00338 296 aa11.94□□□□□ -0.5
LIMS2-216ENST00000494613 KBTBD11O94819 623 aa11.94□□□□□ -0.5
LIMS2-216ENST00000494613 TRBV12-3P01733 135 aa11.94□□□□□ -0.5
LIMS2-216ENST00000494613 GP9P14770 177 aa11.94□□□□□ -0.5
LIMS2-216ENST00000494613 GNRHRP30968 328 aa11.94□□□□□ -0.5
LIMS2-216ENST00000494613 PRSS3P35030 304 aa11.94□□□□□ -0.5
LIMS2-216ENST00000494613 KIR2DS2P43631 304 aa11.94□□□□□ -0.5
LIMS2-216ENST00000494613 TAS2R20P59543 309 aa11.94□□□□□ -0.5
LIMS2-216ENST00000494613 VBP1P61758 197 aa11.94□□□□□ -0.5
LIMS2-216ENST00000494613 NCS1P62166 190 aa11.94□□□□□ -0.5
LIMS2-216ENST00000494613 RHOGP84095 191 aa11.94□□□□□ -0.5
LIMS2-216ENST00000494613 ZNF45Q02386 682 aa11.94□□□□□ -0.5
LIMS2-216ENST00000494613 ATP5G2Q06055 141 aa11.94□□□□□ -0.5
LIMS2-216ENST00000494613 TMEM69Q5SWH9 247 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms