RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 FCGR2CP31995 323 aa10.47□□□□□ -0.73
ERCC3-209ENST00000494464 SUPT4H1P63272 117 aaKnown RBP10.47□□□□□ -0.73
ERCC3-209ENST00000494464 NSUN5P1Q3KNT7 163 aa10.47□□□□□ -0.73
ERCC3-209ENST00000494464 FAM53AQ6NSI3 398 aaPredicted RBP10.47□□□□□ -0.73
ERCC3-209ENST00000494464 SLC38A6Q8IZM9 456 aa10.47□□□□□ -0.73
ERCC3-209ENST00000494464 PRR18Q8N4B5 295 aa10.47□□□□□ -0.73
ERCC3-209ENST00000494464 UXS1Q8NBZ7 420 aa10.47□□□□□ -0.73
ERCC3-209ENST00000494464 OR4F17Q8NGA8 305 aa10.47□□□□□ -0.73
ERCC3-209ENST00000494464 OR5AU1Q8NGC0 362 aa10.47□□□□□ -0.73
ERCC3-209ENST00000494464 OR4A4PQ8NGN8 299 aa10.47□□□□□ -0.73
ERCC3-209ENST00000494464 OR1L1Q8NH94 360 aa10.47□□□□□ -0.73
ERCC3-209ENST00000494464 OR4F4Q96R69 305 aa10.47□□□□□ -0.73
ERCC3-209ENST00000494464 PLSCR3Q9NRY6 295 aa10.47□□□□□ -0.73
ERCC3-209ENST00000494464 KCNIP1Q9NZI2 227 aa10.47□□□□□ -0.73
ERCC3-209ENST00000494464 SLC23A1Q9UHI7 598 aa10.47□□□□□ -0.73
ERCC3-209ENST00000494464 HSPB11Q9Y547 144 aa10.47□□□□□ -0.73
ERCC3-209ENST00000494464 CRYM-AS1A6NIL9 109 aa10.46□□□□□ -0.74
ERCC3-209ENST00000494464 PPYP01298 95 aa10.46□□□□□ -0.74
ERCC3-209ENST00000494464 REG1BP48304 166 aa10.46□□□□□ -0.74
ERCC3-209ENST00000494464 HERV-K104P61576 105 aa10.46□□□□□ -0.74
ERCC3-209ENST00000494464 HTD2P86397 168 aa10.46□□□□□ -0.74
ERCC3-209ENST00000494464 FGL1Q08830 312 aa10.46□□□□□ -0.74
ERCC3-209ENST00000494464 HMGN3Q15651 99 aa10.46□□□□□ -0.74
ERCC3-209ENST00000494464 MOB3BQ86TA1 216 aa10.46□□□□□ -0.74
ERCC3-209ENST00000494464 LYG1Q8N1E2 194 aa10.46□□□□□ -0.74
ERCC3-209ENST00000494464 Q8N6K4 173 aa10.46□□□□□ -0.74
ERCC3-209ENST00000494464 OR4X2Q8NGF9 303 aa10.46□□□□□ -0.74
ERCC3-209ENST00000494464 OR10V1Q8NGI7 309 aa10.46□□□□□ -0.74
ERCC3-209ENST00000494464 CASTOR1Q8WTX7 329 aa10.46□□□□□ -0.74
ERCC3-209ENST00000494464 EAF1Q96JC9 268 aaPredicted RBP10.46□□□□□ -0.74
ERCC3-209ENST00000494464 RSRP1Q9BUV0 290 aa10.46□□□□□ -0.74
ERCC3-209ENST00000494464 OR2S2Q9NQN1 319 aa10.46□□□□□ -0.74
ERCC3-209ENST00000494464 BOLA1Q9Y3E2 137 aa10.46□□□□□ -0.74
ERCC3-209ENST00000494464 SH2D7A6NKC9 451 aaPredicted RBP10.45□□□□□ -0.74
ERCC3-209ENST00000494464 HMSDA8MTL9 139 aa10.45□□□□□ -0.74
ERCC3-209ENST00000494464 TUSC2O75896 110 aa10.45□□□□□ -0.74
ERCC3-209ENST00000494464 SIX6O95475 246 aa10.45□□□□□ -0.74
ERCC3-209ENST00000494464 PI3P19957 117 aa10.45□□□□□ -0.74
ERCC3-209ENST00000494464 AADACP22760 399 aa10.45□□□□□ -0.74
ERCC3-209ENST00000494464 CD1BP29016 333 aa10.45□□□□□ -0.74
ERCC3-209ENST00000494464 ZNF134P52741 427 aa10.45□□□□□ -0.74
ERCC3-209ENST00000494464 MORN2Q502X0 79 aa10.45□□□□□ -0.74
ERCC3-209ENST00000494464 PDLIM3Q53GG5 364 aaPredicted RBP10.45□□□□□ -0.74
ERCC3-209ENST00000494464 Q5BKY6 102 aa10.45□□□□□ -0.74
ERCC3-209ENST00000494464 CT45A1Q5HYN5 189 aa10.45□□□□□ -0.74
ERCC3-209ENST00000494464 C9orf152Q5JTZ5 239 aa10.45□□□□□ -0.74
ERCC3-209ENST00000494464 CENPVQ7Z7K6 275 aaPredicted RBP10.45□□□□□ -0.74
ERCC3-209ENST00000494464 TGIF2LXQ8IUE1 241 aa10.45□□□□□ -0.74
ERCC3-209ENST00000494464 SGPP2Q8IWX5 399 aa10.45□□□□□ -0.74
ERCC3-209ENST00000494464 CCDC71LQ8N9Z2 235 aa10.45□□□□□ -0.74
ERCC3-209ENST00000494464 OR2T10Q8NGZ9 312 aa10.45□□□□□ -0.74
ERCC3-209ENST00000494464 CT45A3Q8NHU0 189 aa10.45□□□□□ -0.74
ERCC3-209ENST00000494464 R3HDM4Q96D70 268 aa10.45□□□□□ -0.74
ERCC3-209ENST00000494464 GALNT14Q96FL9 552 aa10.45□□□□□ -0.74
ERCC3-209ENST00000494464 ABHD14AQ9BUJ0 271 aa10.45□□□□□ -0.74
ERCC3-209ENST00000494464 PLXNB1O43157 2135 aa10.45□□□□□ -0.74
ERCC3-209ENST00000494464 NOTCH1P46531 2555 aa10.45□□□□□ -0.74
ERCC3-209ENST00000494464 PRKDCP78527 4128 aaKnown RBP10.44□□□□□ -0.74
ERCC3-209ENST00000494464 IGHV3-72A0A0B4J1Y9 119 aa10.44□□□□□ -0.74
ERCC3-209ENST00000494464 YPEL1O60688 119 aa10.44□□□□□ -0.74
ERCC3-209ENST00000494464 IGHG2P01859 326 aa10.44□□□□□ -0.74
ERCC3-209ENST00000494464 SCTP09683 121 aa10.44□□□□□ -0.74
ERCC3-209ENST00000494464 C4BPBP20851 252 aa10.44□□□□□ -0.74
ERCC3-209ENST00000494464 RND3P61587 244 aa10.44□□□□□ -0.74
ERCC3-209ENST00000494464 HNF4GQ14541 408 aa10.44□□□□□ -0.74
ERCC3-209ENST00000494464 GNMTQ14749 295 aa10.44□□□□□ -0.74
ERCC3-209ENST00000494464 IGSF11Q5DX21 431 aa10.44□□□□□ -0.74
ERCC3-209ENST00000494464 TCTEX1D4Q5JR98 221 aa10.44□□□□□ -0.74
ERCC3-209ENST00000494464 SAMD5Q5TGI4 173 aa10.44□□□□□ -0.74
ERCC3-209ENST00000494464 GRPEL2Q8TAA5 225 aa10.44□□□□□ -0.74
ERCC3-209ENST00000494464 GALMQ96C23 342 aa10.44□□□□□ -0.74
ERCC3-209ENST00000494464 YPEL2Q96QA6 119 aa10.44□□□□□ -0.74
ERCC3-209ENST00000494464 NAA60Q9H7X0 242 aa10.44□□□□□ -0.74
ERCC3-209ENST00000494464 LIN7CQ9NUP9 197 aaKnown RBP10.44□□□□□ -0.74
ERCC3-209ENST00000494464 TSSC4Q9Y5U2 329 aaPredicted RBP10.44□□□□□ -0.74
ERCC3-209ENST00000494464 TRBV6-7A0A0A0MS04 114 aa10.43□□□□□ -0.74
ERCC3-209ENST00000494464 IGKV1-6A0A0C4DH72 117 aa10.43□□□□□ -0.74
ERCC3-209ENST00000494464 MOSP00540 346 aa10.43□□□□□ -0.74
ERCC3-209ENST00000494464 NFYAP23511 347 aaPredicted RBP10.43□□□□□ -0.74
ERCC3-209ENST00000494464 PPP1CCP36873 323 aaKnown RBP10.43□□□□□ -0.74
ERCC3-209ENST00000494464 PIGPP57054 158 aa10.43□□□□□ -0.74
ERCC3-209ENST00000494464 CYCSP99999 105 aaKnown RBP10.43□□□□□ -0.74
ERCC3-209ENST00000494464 ANKRD55Q3KP44 614 aa10.43□□□□□ -0.74
ERCC3-209ENST00000494464 LGALSLQ3ZCW2 172 aaPredicted RBP10.43□□□□□ -0.74
ERCC3-209ENST00000494464 KPRPQ5T749 579 aaPredicted RBP10.43□□□□□ -0.74
ERCC3-209ENST00000494464 GSG1LQ6UXU4 331 aa10.43□□□□□ -0.74
ERCC3-209ENST00000494464 SLC35E3Q7Z769 313 aa10.43□□□□□ -0.74
ERCC3-209ENST00000494464 ODF3L1Q8IXM7 274 aa10.43□□□□□ -0.74
ERCC3-209ENST00000494464 OR8H1Q8NGG4 311 aa10.43□□□□□ -0.74
ERCC3-209ENST00000494464 OR52L2PQ8NGH6 319 aa10.43□□□□□ -0.74
ERCC3-209ENST00000494464 WDR89Q96FK6 387 aaPredicted RBP10.43□□□□□ -0.74
ERCC3-209ENST00000494464 PDCD10Q9BUL8 212 aa10.43□□□□□ -0.74
ERCC3-209ENST00000494464 NMES1Q9C002 83 aa10.43□□□□□ -0.74
ERCC3-209ENST00000494464 SLC2A9Q9NRM0 540 aa10.43□□□□□ -0.74
ERCC3-209ENST00000494464 TRAV14DV4A0A0A6YYC5 116 aa10.42□□□□□ -0.74
ERCC3-209ENST00000494464 TEX13DA0A0J9YY54 714 aaPredicted RBP10.42□□□□□ -0.74
ERCC3-209ENST00000494464 PSMB11A5LHX3 300 aa10.42□□□□□ -0.74
ERCC3-209ENST00000494464 SLC25A4P12235 298 aa10.42□□□□□ -0.74
ERCC3-209ENST00000494464 FXYD4P59646 89 aa10.42□□□□□ -0.74
ERCC3-209ENST00000494464 BEAN1Q3B7T3 259 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms