RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 RRNAD1Q96FB5 475 aaKnown RBP9.16□□□□□ -0.94
MCF2L-231ENST00000494043 MS4A7Q9GZW8 240 aaPredicted RBP9.16□□□□□ -0.94
MCF2L-231ENST00000494043 MEGF9Q9H1U4 602 aa9.16□□□□□ -0.94
MCF2L-231ENST00000494043 C13orf42A0A1B0GVH6 325 aa9.15□□□□□ -0.94
MCF2L-231ENST00000494043 C5orf51A6NDU8 294 aa9.15□□□□□ -0.94
MCF2L-231ENST00000494043 CYSRT1A8MQ03 144 aa9.15□□□□□ -0.94
MCF2L-231ENST00000494043 MPTX1A8MV57 137 aa9.15□□□□□ -0.94
MCF2L-231ENST00000494043 MOSP00540 346 aa9.15□□□□□ -0.94
MCF2L-231ENST00000494043 IGLV2-23P01705 113 aa9.15□□□□□ -0.94
MCF2L-231ENST00000494043 SNRNP70P08621 437 aaKnown RBP9.15□□□□□ -0.94
MCF2L-231ENST00000494043 CD99P14209 185 aa9.15□□□□□ -0.94
MCF2L-231ENST00000494043 LGALS7P47929 136 aa9.15□□□□□ -0.94
MCF2L-231ENST00000494043 DYNLT3P51808 116 aa9.15□□□□□ -0.94
MCF2L-231ENST00000494043 RPS16P62249 146 aaKnown RBP9.15□□□□□ -0.94
MCF2L-231ENST00000494043 GSG1LQ6UXU4 331 aa9.15□□□□□ -0.94
MCF2L-231ENST00000494043 SSX9Q7RTT3 188 aa9.15□□□□□ -0.94
MCF2L-231ENST00000494043 AKAP14Q86UN6 197 aa9.15□□□□□ -0.94
MCF2L-231ENST00000494043 THNSL2Q86YJ6 484 aa9.15□□□□□ -0.94
MCF2L-231ENST00000494043 VKORC1L1Q8N0U8 176 aa9.15□□□□□ -0.94
MCF2L-231ENST00000494043 DMBX1Q8NFW5 382 aa9.15□□□□□ -0.94
MCF2L-231ENST00000494043 OR2T10Q8NGZ9 312 aa9.15□□□□□ -0.94
MCF2L-231ENST00000494043 GPR146Q96CH1 333 aa9.15□□□□□ -0.94
MCF2L-231ENST00000494043 OR10C1Q96KK4 312 aa9.15□□□□□ -0.94
MCF2L-231ENST00000494043 RHOVQ96L33 236 aa9.15□□□□□ -0.94
MCF2L-231ENST00000494043 SPIN2AQ99865 258 aa9.15□□□□□ -0.94
MCF2L-231ENST00000494043 RNF5Q99942 180 aa9.15□□□□□ -0.94
MCF2L-231ENST00000494043 SMR3AQ99954 134 aa9.15□□□□□ -0.94
MCF2L-231ENST00000494043 SPIN2BQ9BPZ2 258 aa9.15□□□□□ -0.94
MCF2L-231ENST00000494043 AIFM2Q9BRQ8 373 aa9.15□□□□□ -0.94
MCF2L-231ENST00000494043 ZNF436Q9C0F3 470 aaPredicted RBP9.15□□□□□ -0.94
MCF2L-231ENST00000494043 TMEM160Q9NX00 188 aa9.15□□□□□ -0.94
MCF2L-231ENST00000494043 MMP24Q9Y5R2 645 aa9.15□□□□□ -0.94
MCF2L-231ENST00000494043 HIVEP1P15822 2718 aa9.15□□□□□ -0.95
MCF2L-231ENST00000494043 MXRA5Q9NR99 2828 aa9.14□□□□□ -0.95
MCF2L-231ENST00000494043 SRRM4A7MD48 611 aaKnown RBP9.14□□□□□ -0.95
MCF2L-231ENST00000494043 CCNKO75909 580 aa9.14□□□□□ -0.95
MCF2L-231ENST00000494043 OR2A4O95047 310 aa9.14□□□□□ -0.95
MCF2L-231ENST00000494043 LY6G6DO95868 133 aa9.14□□□□□ -0.95
MCF2L-231ENST00000494043 GIPP09681 153 aaPredicted RBP9.14□□□□□ -0.95
MCF2L-231ENST00000494043 FAM106CPP0CH98 169 aa9.14□□□□□ -0.95
MCF2L-231ENST00000494043 SAA1P0DJI8 122 aaPredicted RBP9.14□□□□□ -0.95
MCF2L-231ENST00000494043 SLC25A6P12236 298 aa9.14□□□□□ -0.95
MCF2L-231ENST00000494043 HNF1AP20823 631 aa9.14□□□□□ -0.95
MCF2L-231ENST00000494043 CD24P25063 80 aa9.14□□□□□ -0.95
MCF2L-231ENST00000494043 CD83Q01151 205 aa9.14□□□□□ -0.95
MCF2L-231ENST00000494043 SRSF4Q08170 494 aaKnown RBP9.14□□□□□ -0.95
MCF2L-231ENST00000494043 EBI3Q14213 229 aa9.14□□□□□ -0.95
MCF2L-231ENST00000494043 HES1Q14469 280 aa9.14□□□□□ -0.95
MCF2L-231ENST00000494043 AANATQ16613 207 aa9.14□□□□□ -0.95
MCF2L-231ENST00000494043 IZUMO4Q1ZYL8 232 aa9.14□□□□□ -0.95
MCF2L-231ENST00000494043 IAH1Q2TAA2 248 aaPredicted RBP9.14□□□□□ -0.95
MCF2L-231ENST00000494043 LRRC75BQ2VPJ9 315 aa9.14□□□□□ -0.95
MCF2L-231ENST00000494043 DEFB112Q30KQ8 113 aa9.14□□□□□ -0.95
MCF2L-231ENST00000494043 VMA21Q3ZAQ7 101 aa9.14□□□□□ -0.95
MCF2L-231ENST00000494043 FBLN7Q53RD9 439 aa9.14□□□□□ -0.95
MCF2L-231ENST00000494043 THOC7Q6I9Y2 204 aaKnown RBP9.14□□□□□ -0.95
MCF2L-231ENST00000494043 OR4A47Q6IF82 309 aa9.14□□□□□ -0.95
MCF2L-231ENST00000494043 IL17RELQ6ZVW7 336 aa9.14□□□□□ -0.95
MCF2L-231ENST00000494043 H2BFWTQ7Z2G1 175 aa9.14□□□□□ -0.95
MCF2L-231ENST00000494043 PUSL1Q8N0Z8 303 aaKnown RBP9.14□□□□□ -0.95
MCF2L-231ENST00000494043 BCL6BQ8N143 479 aaPredicted RBP9.14□□□□□ -0.95
MCF2L-231ENST00000494043 Q8N6K4 173 aa9.14□□□□□ -0.95
MCF2L-231ENST00000494043 ZBTB8BQ8NAP8 495 aaPredicted RBP9.14□□□□□ -0.95
MCF2L-231ENST00000494043 ASB13Q8WXK3 278 aa9.14□□□□□ -0.95
MCF2L-231ENST00000494043 EAF1Q96JC9 268 aaPredicted RBP9.14□□□□□ -0.95
MCF2L-231ENST00000494043 RITA1Q96K30 269 aa9.14□□□□□ -0.95
MCF2L-231ENST00000494043 OR2A7Q96R45 310 aa9.14□□□□□ -0.95
MCF2L-231ENST00000494043 TSNAXQ99598 290 aaKnown RBP9.14□□□□□ -0.95
MCF2L-231ENST00000494043 PDCD10Q9BUL8 212 aa9.14□□□□□ -0.95
MCF2L-231ENST00000494043 CHIAQ9BZP6 476 aa9.14□□□□□ -0.95
MCF2L-231ENST00000494043 TMEM140Q9NV12 185 aa9.14□□□□□ -0.95
MCF2L-231ENST00000494043 A0A1B0GU03 582 aa9.13□□□□□ -0.95
MCF2L-231ENST00000494043 MDFIC2A0A1B0GVS7 189 aa9.13□□□□□ -0.95
MCF2L-231ENST00000494043 SPDEFO95238 335 aa9.13□□□□□ -0.95
MCF2L-231ENST00000494043 TMEM11P17152 192 aa9.13□□□□□ -0.95
MCF2L-231ENST00000494043 CNTFRP26992 372 aa9.13□□□□□ -0.95
MCF2L-231ENST00000494043 SRP14P37108 136 aaKnown RBP9.13□□□□□ -0.95
MCF2L-231ENST00000494043 UBE2KP61086 200 aa9.13□□□□□ -0.95
MCF2L-231ENST00000494043 RAP2BP61225 183 aa9.13□□□□□ -0.95
MCF2L-231ENST00000494043 HNF4GQ14541 408 aa9.13□□□□□ -0.95
MCF2L-231ENST00000494043 SMCO1Q147U7 214 aa9.13□□□□□ -0.95
MCF2L-231ENST00000494043 Q6ZRM9 215 aa9.13□□□□□ -0.95
MCF2L-231ENST00000494043 PIFOQ8TCI5 191 aa9.13□□□□□ -0.95
MCF2L-231ENST00000494043 C22orf15Q8WYQ4 148 aa9.13□□□□□ -0.95
MCF2L-231ENST00000494043 WDR89Q96FK6 387 aaPredicted RBP9.13□□□□□ -0.95
MCF2L-231ENST00000494043 ST6GAL2Q96JF0 529 aa9.13□□□□□ -0.95
MCF2L-231ENST00000494043 C2orf50Q96LR7 162 aa9.13□□□□□ -0.95
MCF2L-231ENST00000494043 SSX3Q99909 188 aa9.13□□□□□ -0.95
MCF2L-231ENST00000494043 NEURL2Q9BR09 285 aa9.13□□□□□ -0.95
MCF2L-231ENST00000494043 RANBP3Q9H6Z4 567 aaPredicted RBP9.13□□□□□ -0.95
MCF2L-231ENST00000494043 RANGRFQ9HD47 186 aaPredicted RBP9.13□□□□□ -0.95
MCF2L-231ENST00000494043 COA4Q9NYJ1 87 aa9.13□□□□□ -0.95
MCF2L-231ENST00000494043 BET1LQ9NYM9 111 aa9.13□□□□□ -0.95
MCF2L-231ENST00000494043 CACNG5Q9UF02 275 aa9.13□□□□□ -0.95
MCF2L-231ENST00000494043 ANK3Q12955 4377 aaKnown RBP9.13□□□□□ -0.95
MCF2L-231ENST00000494043 SVEP1Q4LDE5 3571 aa9.13□□□□□ -0.95
MCF2L-231ENST00000494043 NBR2O15453 112 aa9.12□□□□□ -0.95
MCF2L-231ENST00000494043 SLC25A17O43808 307 aa9.12□□□□□ -0.95
MCF2L-231ENST00000494043 PFDN1O60925 122 aa9.12□□□□□ -0.95
MCF2L-231ENST00000494043 PITX3O75364 302 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms