RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 ZNF718Q3SXZ3 478 aa3.38□□□□□ -1.87
BRCA1-220ENST00000492859 LCN12Q6JVE5 192 aa3.38□□□□□ -1.87
BRCA1-220ENST00000492859 TRNP1Q6NT89 227 aa3.38□□□□□ -1.87
BRCA1-220ENST00000492859 Q6Q795 121 aa3.38□□□□□ -1.87
BRCA1-220ENST00000492859 TEX29Q8N6K0 151 aa3.38□□□□□ -1.87
BRCA1-220ENST00000492859 LY6G5BQ8NDX9 201 aa3.38□□□□□ -1.87
BRCA1-220ENST00000492859 OR1J1Q8NGS3 322 aa3.38□□□□□ -1.87
BRCA1-220ENST00000492859 LMX1AQ8TE12 382 aa3.38□□□□□ -1.87
BRCA1-220ENST00000492859 IL1F10Q8WWZ1 152 aa3.38□□□□□ -1.87
BRCA1-220ENST00000492859 TSLPQ969D9 159 aa3.38□□□□□ -1.87
BRCA1-220ENST00000492859 TMEM230Q96A57 120 aa3.38□□□□□ -1.87
BRCA1-220ENST00000492859 MBD6Q96DN6 1003 aa3.38□□□□□ -1.87
BRCA1-220ENST00000492859 METTL26Q96S19 204 aa3.38□□□□□ -1.87
BRCA1-220ENST00000492859 SOSTQ9BQB4 213 aa3.38□□□□□ -1.87
BRCA1-220ENST00000492859 RERGLQ9H628 205 aa3.38□□□□□ -1.87
BRCA1-220ENST00000492859 GNB4Q9HAV0 340 aa3.38□□□□□ -1.87
BRCA1-220ENST00000492859 NPVFQ9HCQ7 196 aa3.38□□□□□ -1.87
BRCA1-220ENST00000492859 EXOSC3Q9NQT5 275 aaKnown RBP3.38□□□□□ -1.87
BRCA1-220ENST00000492859 FUT9Q9Y231 359 aa3.38□□□□□ -1.87
BRCA1-220ENST00000492859 POMPQ9Y244 141 aa3.38□□□□□ -1.87
BRCA1-220ENST00000492859 PYGO1Q9Y3Y4 419 aa3.38□□□□□ -1.87
BRCA1-220ENST00000492859 FLVCR1Q9Y5Y0 555 aa3.38□□□□□ -1.87
BRCA1-220ENST00000492859 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.38□□□□□ -1.87
BRCA1-220ENST00000492859 MICAL3Q7RTP6 2002 aa3.37□□□□□ -1.87
BRCA1-220ENST00000492859 PHF3Q92576 2039 aaKnown RBP3.37□□□□□ -1.87
BRCA1-220ENST00000492859 KIF14Q15058 1648 aa3.37□□□□□ -1.87
BRCA1-220ENST00000492859 ABCC3O15438 1527 aa3.37□□□□□ -1.87
BRCA1-220ENST00000492859 FER1L6Q2WGJ9 1857 aa3.37□□□□□ -1.87
BRCA1-220ENST00000492859 NRKQ7Z2Y5 1582 aa3.37□□□□□ -1.87
BRCA1-220ENST00000492859 ANKRD50Q9ULJ7 1429 aa3.37□□□□□ -1.87
BRCA1-220ENST00000492859 ODAMA1E959 279 aa3.37□□□□□ -1.87
BRCA1-220ENST00000492859 C5orf49A4QMS7 147 aa3.37□□□□□ -1.87
BRCA1-220ENST00000492859 LINC01553A4QN01 128 aa3.37□□□□□ -1.87
BRCA1-220ENST00000492859 RFXAPO00287 272 aa3.37□□□□□ -1.87
BRCA1-220ENST00000492859 PAX4O43316 350 aa3.37□□□□□ -1.87
BRCA1-220ENST00000492859 NCR2O95944 276 aa3.37□□□□□ -1.87
BRCA1-220ENST00000492859 CA2P00918 260 aa3.37□□□□□ -1.87
BRCA1-220ENST00000492859 TNFP01375 233 aa3.37□□□□□ -1.87
BRCA1-220ENST00000492859 DRD3P35462 400 aa3.37□□□□□ -1.87
BRCA1-220ENST00000492859 PAX8Q06710 450 aa3.37□□□□□ -1.87
BRCA1-220ENST00000492859 DIAPH2-AS1Q14236 149 aa3.37□□□□□ -1.87
BRCA1-220ENST00000492859 SP6Q3SY56 376 aa3.37□□□□□ -1.87
BRCA1-220ENST00000492859 LGALSLQ3ZCW2 172 aaPredicted RBP3.37□□□□□ -1.87
BRCA1-220ENST00000492859 Q6AWC8 147 aa3.37□□□□□ -1.87
BRCA1-220ENST00000492859 SCGB1D4Q6XE38 83 aa3.37□□□□□ -1.87
BRCA1-220ENST00000492859 ZNF493Q6ZR52 646 aa3.37□□□□□ -1.87
BRCA1-220ENST00000492859 FTMTQ8N4E7 242 aa3.37□□□□□ -1.87
BRCA1-220ENST00000492859 C10orf82Q8WW14 230 aa3.37□□□□□ -1.87
BRCA1-220ENST00000492859 DDB2Q92466 427 aa3.37□□□□□ -1.87
BRCA1-220ENST00000492859 ZNF501Q96CX3 271 aaPredicted RBP3.37□□□□□ -1.87
BRCA1-220ENST00000492859 SLC25A21Q9BQT8 299 aaPredicted RBP3.37□□□□□ -1.87
BRCA1-220ENST00000492859 TMEM191AQ9H0A3 160 aa3.37□□□□□ -1.87
BRCA1-220ENST00000492859 MAP6D1Q9H9H5 199 aa3.37□□□□□ -1.87
BRCA1-220ENST00000492859 HEBP1Q9NRV9 189 aa3.37□□□□□ -1.87
BRCA1-220ENST00000492859 MARCH5Q9NX47 278 aa3.37□□□□□ -1.87
BRCA1-220ENST00000492859 RNF11Q9Y3C5 154 aa3.37□□□□□ -1.87
BRCA1-220ENST00000492859 AMMECR1Q9Y4X0 333 aaPredicted RBP3.37□□□□□ -1.87
BRCA1-220ENST00000492859 LINC00312Q9Y6C7 94 aa3.37□□□□□ -1.87
BRCA1-220ENST00000492859 PXMP4Q9Y6I8 212 aa3.37□□□□□ -1.87
BRCA1-220ENST00000492859 ALPK3Q96L96 1907 aa3.37□□□□□ -1.87
BRCA1-220ENST00000492859 GLI3P10071 1580 aa3.36□□□□□ -1.87
BRCA1-220ENST00000492859 TCHHQ07283 1943 aa3.36□□□□□ -1.87
BRCA1-220ENST00000492859 DENND4CQ5VZ89 1909 aa3.36□□□□□ -1.87
BRCA1-220ENST00000492859 A0A087X0T9 212 aa3.36□□□□□ -1.87
BRCA1-220ENST00000492859 TRGV10A0A0A0MS01 117 aa3.36□□□□□ -1.87
BRCA1-220ENST00000492859 IGLV1-36A0A0B4J1U3 117 aa3.36□□□□□ -1.87
BRCA1-220ENST00000492859 LOC100131303A0A0U1RQF7 123 aa3.36□□□□□ -1.87
BRCA1-220ENST00000492859 MYOCOSA0A1B0GUC4 107 aa3.36□□□□□ -1.87
BRCA1-220ENST00000492859 TEX48A0A1B0GUV7 120 aa3.36□□□□□ -1.87
BRCA1-220ENST00000492859 WI2-2373I1.2A0A1W2PRP0 233 aa3.36□□□□□ -1.87
BRCA1-220ENST00000492859 TCRBV5S1A1TA0A578 114 aa3.36□□□□□ -1.87
BRCA1-220ENST00000492859 CD300LBA8K4G0 201 aa3.36□□□□□ -1.87
BRCA1-220ENST00000492859 C11orf98E9PRG8 122 aa3.36□□□□□ -1.87
BRCA1-220ENST00000492859 H0YIZ8 118 aa3.36□□□□□ -1.87
BRCA1-220ENST00000492859 H3BP45 60 aa3.36□□□□□ -1.87
BRCA1-220ENST00000492859 TAX1BP3O14907 124 aa3.36□□□□□ -1.87
BRCA1-220ENST00000492859 RER1O15258 196 aa3.36□□□□□ -1.87
BRCA1-220ENST00000492859 KLF7O75840 302 aaPredicted RBP3.36□□□□□ -1.87
BRCA1-220ENST00000492859 EIF4EP06730 217 aaKnown RBP3.36□□□□□ -1.87
BRCA1-220ENST00000492859 MMP7P09237 267 aaPredicted RBP3.36□□□□□ -1.87
BRCA1-220ENST00000492859 ADCYAP1P18509 176 aa3.36□□□□□ -1.87
BRCA1-220ENST00000492859 ZNF93P35789 620 aaPredicted RBP3.36□□□□□ -1.87
BRCA1-220ENST00000492859 SLC25A1P53007 311 aa3.36□□□□□ -1.87
BRCA1-220ENST00000492859 HERVK_113P63121 156 aa3.36□□□□□ -1.87
BRCA1-220ENST00000492859 CRADDP78560 199 aa3.36□□□□□ -1.87
BRCA1-220ENST00000492859 SRSF9Q13242 221 aaKnown RBP eCLIP3.36□□□□□ -1.87
BRCA1-220ENST00000492859 TMEM183BQ1AE95 376 aa3.36□□□□□ -1.87
BRCA1-220ENST00000492859 NSUN5P1Q3KNT7 163 aa3.36□□□□□ -1.87
BRCA1-220ENST00000492859 FAM153CQ494X1 144 aa3.36□□□□□ -1.87
BRCA1-220ENST00000492859 CENPWQ5EE01 88 aa3.36□□□□□ -1.87
BRCA1-220ENST00000492859 ZNF57Q68EA5 555 aaPredicted RBP3.36□□□□□ -1.87
BRCA1-220ENST00000492859 LCN8Q6JVE9 175 aa3.36□□□□□ -1.87
BRCA1-220ENST00000492859 DNAJC24Q6P3W2 148 aa3.36□□□□□ -1.87
BRCA1-220ENST00000492859 TEX43Q6ZNM6 134 aa3.36□□□□□ -1.87
BRCA1-220ENST00000492859 Q6ZUT4 128 aa3.36□□□□□ -1.87
BRCA1-220ENST00000492859 TMEM183AQ8IXX5 376 aa3.36□□□□□ -1.87
BRCA1-220ENST00000492859 OR2A12Q8NGT7 310 aa3.36□□□□□ -1.87
BRCA1-220ENST00000492859 OR5AK2Q8NH90 309 aa3.36□□□□□ -1.87
BRCA1-220ENST00000492859 SLC25A40Q8TBP6 338 aa3.36□□□□□ -1.87
BRCA1-220ENST00000492859 APOBEC4Q8WW27 367 aaKnown RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms