RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	AKIRIN2	Q53H80	203 aa		3.91	□□□□□ -1.78
SEC13-219	ENST00000492602	CT45A1	Q5HYN5	189 aa		3.91	□□□□□ -1.78
SEC13-219	ENST00000492602	FAM209B	Q5JX69	171 aa		3.91	□□□□□ -1.78
SEC13-219	ENST00000492602	UNQ5815/PRO19632	Q6UWF5	114 aa		3.91	□□□□□ -1.78
SEC13-219	ENST00000492602	ZNF562	Q6V9R5	426 aa		3.91	□□□□□ -1.78
SEC13-219	ENST00000492602	AHSA2	Q719I0	299 aa		3.91	□□□□□ -1.78
SEC13-219	ENST00000492602	TMEM61	Q8N0U2	210 aa		3.91	□□□□□ -1.78
SEC13-219	ENST00000492602	NANOGP1	Q8N7R0	232 aa		3.91	□□□□□ -1.78
SEC13-219	ENST00000492602	OR6M1	Q8NGM8	313 aa		3.91	□□□□□ -1.78
SEC13-219	ENST00000492602	OR4A5	Q8NH83	315 aa		3.91	□□□□□ -1.78
SEC13-219	ENST00000492602	OR10J5	Q8NHC4	309 aa		3.91	□□□□□ -1.78
SEC13-219	ENST00000492602	CT45A3	Q8NHU0	189 aa		3.91	□□□□□ -1.78
SEC13-219	ENST00000492602	FAM46B	Q96A09	425 aa		3.91	□□□□□ -1.78
SEC13-219	ENST00000492602	DERL3	Q96Q80	235 aa		3.91	□□□□□ -1.78
SEC13-219	ENST00000492602	FAM103A1	Q9BTL3	118 aa	Known RBP	3.91	□□□□□ -1.78
SEC13-219	ENST00000492602	FAAP24	Q9BTP7	215 aa		3.91	□□□□□ -1.78
SEC13-219	ENST00000492602	HRH4	Q9H3N8	390 aa		3.91	□□□□□ -1.78
SEC13-219	ENST00000492602	TECR	Q9NZ01	308 aa	Known RBP	3.91	□□□□□ -1.78
SEC13-219	ENST00000492602	UBQLN2	Q9UHD9	624 aa		3.91	□□□□□ -1.78
SEC13-219	ENST00000492602	PSORS1C1	Q9UIG5	152 aa		3.91	□□□□□ -1.78
SEC13-219	ENST00000492602	RAB22A	Q9UL26	194 aa		3.91	□□□□□ -1.78
SEC13-219	ENST00000492602	WASHC3	Q9Y3C0	194 aa		3.91	□□□□□ -1.78
SEC13-219	ENST00000492602	NUBP2	Q9Y5Y2	271 aa		3.91	□□□□□ -1.78
SEC13-219	ENST00000492602	DEFB131B	A0A096LNP1	70 aa		3.9	□□□□□ -1.79
SEC13-219	ENST00000492602	TRBV5-7	A0A0A0MS05	114 aa		3.9	□□□□□ -1.79
SEC13-219	ENST00000492602		A0A1W2PP11	408 aa		3.9	□□□□□ -1.79
SEC13-219	ENST00000492602	ITGB1BP1	O14713	200 aa		3.9	□□□□□ -1.79
SEC13-219	ENST00000492602	MPPED1	O15442	326 aa		3.9	□□□□□ -1.79
SEC13-219	ENST00000492602	TGOLN2	O43493	480 aa		3.9	□□□□□ -1.79
SEC13-219	ENST00000492602	WBP4	O75554	376 aa	Known RBP	3.9	□□□□□ -1.79
SEC13-219	ENST00000492602	SC5D	O75845	299 aa		3.9	□□□□□ -1.79
SEC13-219	ENST00000492602	DHFR	P00374	187 aa		3.9	□□□□□ -1.79
SEC13-219	ENST00000492602	GHRH	P01286	108 aa		3.9	□□□□□ -1.79
SEC13-219	ENST00000492602	GSTT2	P0CG29	244 aa		3.9	□□□□□ -1.79
SEC13-219	ENST00000492602	GSTT2B	P0CG30	244 aa		3.9	□□□□□ -1.79
SEC13-219	ENST00000492602	FOLR2	P14207	255 aa		3.9	□□□□□ -1.79
SEC13-219	ENST00000492602	AADAC	P22760	399 aa		3.9	□□□□□ -1.79
SEC13-219	ENST00000492602	MYL9	P24844	172 aa		3.9	□□□□□ -1.79
SEC13-219	ENST00000492602	PPP1CC	P36873	323 aa	Known RBP	3.9	□□□□□ -1.79
SEC13-219	ENST00000492602	ASIP	P42127	132 aa		3.9	□□□□□ -1.79
SEC13-219	ENST00000492602	ZNF137P	P52743	207 aa		3.9	□□□□□ -1.79
SEC13-219	ENST00000492602	CRIP2	P52943	208 aa	Predicted RBP	3.9	□□□□□ -1.79
SEC13-219	ENST00000492602	CX3CL1	P78423	397 aa		3.9	□□□□□ -1.79
SEC13-219	ENST00000492602	C5orf64	Q2M2E5	130 aa		3.9	□□□□□ -1.79
SEC13-219	ENST00000492602	XAF1	Q6GPH4	301 aa		3.9	□□□□□ -1.79
SEC13-219	ENST00000492602	CD200R1L	Q6Q8B3	271 aa		3.9	□□□□□ -1.79
SEC13-219	ENST00000492602	SLC25A42	Q86VD7	318 aa		3.9	□□□□□ -1.79
SEC13-219	ENST00000492602	PPP1R27	Q86WC6	154 aa		3.9	□□□□□ -1.79
SEC13-219	ENST00000492602	ZFP41	Q8N8Y5	198 aa		3.9	□□□□□ -1.79
SEC13-219	ENST00000492602	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	3.9	□□□□□ -1.79
SEC13-219	ENST00000492602	LFNG	Q8NES3	379 aa		3.9	□□□□□ -1.79
SEC13-219	ENST00000492602	NPB	Q8NG41	125 aa		3.9	□□□□□ -1.79
SEC13-219	ENST00000492602	OR52L2P	Q8NGH6	319 aa		3.9	□□□□□ -1.79
SEC13-219	ENST00000492602	OR1L1	Q8NH94	360 aa		3.9	□□□□□ -1.79
SEC13-219	ENST00000492602	ADTRP	Q96IZ2	230 aa		3.9	□□□□□ -1.79
SEC13-219	ENST00000492602	RITA1	Q96K30	269 aa		3.9	□□□□□ -1.79
SEC13-219	ENST00000492602		Q96M66	194 aa		3.9	□□□□□ -1.79
SEC13-219	ENST00000492602	PHB2	Q99623	299 aa		3.9	□□□□□ -1.79
SEC13-219	ENST00000492602	CMSS1	Q9BQ75	279 aa	Known RBP	3.9	□□□□□ -1.79
SEC13-219	ENST00000492602	GINS4	Q9BRT9	223 aa		3.9	□□□□□ -1.79
SEC13-219	ENST00000492602	DCUN1D5	Q9BTE7	237 aa		3.9	□□□□□ -1.79
SEC13-219	ENST00000492602	CHRDL1	Q9BU40	450 aa		3.9	□□□□□ -1.79
SEC13-219	ENST00000492602	SCRT1	Q9BWW7	348 aa		3.9	□□□□□ -1.79
SEC13-219	ENST00000492602	PARP12	Q9H0J9	701 aa	Known RBP	3.9	□□□□□ -1.79
SEC13-219	ENST00000492602		Q9H521	79 aa		3.9	□□□□□ -1.79
SEC13-219	ENST00000492602	MAP6D1	Q9H9H5	199 aa		3.9	□□□□□ -1.79
SEC13-219	ENST00000492602	C12orf4	Q9NQ89	552 aa		3.9	□□□□□ -1.79
SEC13-219	ENST00000492602	PTTG2	Q9NZH5	202 aa		3.9	□□□□□ -1.79
SEC13-219	ENST00000492602	RCC2	Q9P258	522 aa	Known RBP	3.9	□□□□□ -1.79
SEC13-219	ENST00000492602	CLEC2D	Q9UHP7	191 aa		3.9	□□□□□ -1.79
SEC13-219	ENST00000492602	TMA7	Q9Y2S6	64 aa	Known RBP	3.9	□□□□□ -1.79
SEC13-219	ENST00000492602	PRELID3B	Q9Y3B1	194 aa		3.9	□□□□□ -1.79
SEC13-219	ENST00000492602	MUC2	Q02817	5179 aa		3.89	□□□□□ -1.79
SEC13-219	ENST00000492602	FAT4	Q6V0I7	4981 aa		3.89	□□□□□ -1.79
SEC13-219	ENST00000492602	TRAV8-7	A0A075B6U6	113 aa		3.89	□□□□□ -1.79
SEC13-219	ENST00000492602	DPPA5	A6NC42	116 aa		3.89	□□□□□ -1.79
SEC13-219	ENST00000492602	C2orf70	A6NJV1	201 aa		3.89	□□□□□ -1.79
SEC13-219	ENST00000492602	TRDC	B7Z8K6	153 aa		3.89	□□□□□ -1.79
SEC13-219	ENST00000492602	RRH	O14718	337 aa		3.89	□□□□□ -1.79
SEC13-219	ENST00000492602	DENR	O43583	198 aa	Known RBP	3.89	□□□□□ -1.79
SEC13-219	ENST00000492602	RGS10	O43665	173 aa		3.89	□□□□□ -1.79
SEC13-219	ENST00000492602	SCGN	O76038	276 aa		3.89	□□□□□ -1.79
SEC13-219	ENST00000492602	SPDEF	O95238	335 aa		3.89	□□□□□ -1.79
SEC13-219	ENST00000492602	CDK1	P06493	297 aa		3.89	□□□□□ -1.79
SEC13-219	ENST00000492602	SCT	P09683	121 aa		3.89	□□□□□ -1.79
SEC13-219	ENST00000492602	CTXN2	P0C2S0	81 aa		3.89	□□□□□ -1.79
SEC13-219	ENST00000492602	ZNF134	P52741	427 aa		3.89	□□□□□ -1.79
SEC13-219	ENST00000492602	ARPC4	P59998	168 aa		3.89	□□□□□ -1.79
SEC13-219	ENST00000492602	RPS27A	P62979	156 aa	Known RBP	3.89	□□□□□ -1.79
SEC13-219	ENST00000492602	DEFA5	Q01523	94 aa		3.89	□□□□□ -1.79
SEC13-219	ENST00000492602	LSAMP	Q13449	338 aa		3.89	□□□□□ -1.79
SEC13-219	ENST00000492602	ARFRP1	Q13795	201 aa		3.89	□□□□□ -1.79
SEC13-219	ENST00000492602	FXYD3	Q14802	87 aa		3.89	□□□□□ -1.79
SEC13-219	ENST00000492602	P2RY14	Q15391	338 aa		3.89	□□□□□ -1.79
SEC13-219	ENST00000492602	VMA21	Q3ZAQ7	101 aa		3.89	□□□□□ -1.79
SEC13-219	ENST00000492602	ZNF57	Q68EA5	555 aa	Predicted RBP	3.89	□□□□□ -1.79
SEC13-219	ENST00000492602	C6orf201	Q7Z4U5	140 aa		3.89	□□□□□ -1.79
SEC13-219	ENST00000492602	PDPN	Q86YL7	162 aa		3.89	□□□□□ -1.79
SEC13-219	ENST00000492602	POC5	Q8NA72	575 aa		3.89	□□□□□ -1.79
SEC13-219	ENST00000492602	BVES	Q8NE79	360 aa		3.89	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms