RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 DEFB135Q30KP9 77 aa10.39□□□□□ -0.75
VARS-227ENST00000489979 LGALS9CQ6DKI2 356 aa10.39□□□□□ -0.75
VARS-227ENST00000489979 C19orf35Q6ZS72 473 aa10.39□□□□□ -0.75
VARS-227ENST00000489979 PQLC1Q8N2U9 271 aa10.39□□□□□ -0.75
VARS-227ENST00000489979 OR10J5Q8NHC4 309 aa10.39□□□□□ -0.75
VARS-227ENST00000489979 CYGBQ8WWM9 190 aa10.39□□□□□ -0.75
VARS-227ENST00000489979 S100A14Q9HCY8 104 aa10.39□□□□□ -0.75
VARS-227ENST00000489979 FBXL7Q9UJT9 491 aa10.39□□□□□ -0.75
VARS-227ENST00000489979 RBM7Q9Y580 266 aaKnown RBP10.39□□□□□ -0.75
VARS-227ENST00000489979 S4R3C0 116 aa10.39□□□□□ -0.75
VARS-227ENST00000489979 HMX3A6NHT5 357 aa10.38□□□□□ -0.75
VARS-227ENST00000489979 LINC00473A8K010 186 aa10.38□□□□□ -0.75
VARS-227ENST00000489979 GSTT2P0CG29 244 aa10.38□□□□□ -0.75
VARS-227ENST00000489979 GSTT2BP0CG30 244 aa10.38□□□□□ -0.75
VARS-227ENST00000489979 ATF4P18848 351 aaPredicted RBP10.38□□□□□ -0.75
VARS-227ENST00000489979 APOC4P55056 127 aa10.38□□□□□ -0.75
VARS-227ENST00000489979 FAM106AQ4KMX7 169 aa10.38□□□□□ -0.75
VARS-227ENST00000489979 HSD17B12Q53GQ0 312 aa10.38□□□□□ -0.75
VARS-227ENST00000489979 PLAC9Q5JTB6 97 aa10.38□□□□□ -0.75
VARS-227ENST00000489979 BTNL8Q6UX41 500 aa10.38□□□□□ -0.75
VARS-227ENST00000489979 CLEC19AQ6UXS0 136 aa10.38□□□□□ -0.75
VARS-227ENST00000489979 Q6ZWC4 215 aa10.38□□□□□ -0.75
VARS-227ENST00000489979 SLC25A42Q86VD7 318 aa10.38□□□□□ -0.75
VARS-227ENST00000489979 MMD2Q8IY49 270 aa10.38□□□□□ -0.75
VARS-227ENST00000489979 MS4A15Q8N5U1 240 aa10.38□□□□□ -0.75
VARS-227ENST00000489979 NANOGP1Q8N7R0 232 aa10.38□□□□□ -0.75
VARS-227ENST00000489979 OSR1Q8TAX0 266 aaPredicted RBP10.38□□□□□ -0.75
VARS-227ENST00000489979 PHLDA1Q8WV24 401 aaPredicted RBP10.38□□□□□ -0.75
VARS-227ENST00000489979 ADTRPQ96IZ2 230 aa10.38□□□□□ -0.75
VARS-227ENST00000489979 CCDC140Q96MF4 163 aa10.38□□□□□ -0.75
VARS-227ENST00000489979 CABLES2Q9BTV7 478 aa10.38□□□□□ -0.75
VARS-227ENST00000489979 ZNF257Q9Y2Q1 563 aa10.38□□□□□ -0.75
VARS-227ENST00000489979 TRBV6-7A0A0A0MS04 114 aa10.37□□□□□ -0.75
VARS-227ENST00000489979 A8MWP6 167 aa10.37□□□□□ -0.75
VARS-227ENST00000489979 CREBL2O60519 120 aaPredicted RBP10.37□□□□□ -0.75
VARS-227ENST00000489979 MAP2K4P45985 399 aa10.37□□□□□ -0.75
VARS-227ENST00000489979 CDK10Q15131 360 aa10.37□□□□□ -0.75
VARS-227ENST00000489979 AHSA2Q719I0 299 aa10.37□□□□□ -0.75
VARS-227ENST00000489979 SETD9Q8NE22 299 aa10.37□□□□□ -0.75
VARS-227ENST00000489979 OR1L6Q8NGR2 347 aa10.37□□□□□ -0.75
VARS-227ENST00000489979 GATAD1Q8WUU5 269 aa10.37□□□□□ -0.75
VARS-227ENST00000489979 GFI1Q99684 422 aa10.37□□□□□ -0.75
VARS-227ENST00000489979 PLGRKTQ9HBL7 147 aa10.37□□□□□ -0.75
VARS-227ENST00000489979 FAT2Q9NYQ8 4349 aa10.36□□□□□ -0.75
VARS-227ENST00000489979 TRAV25A0A0B4J276 109 aa10.36□□□□□ -0.75
VARS-227ENST00000489979 NPIPB5A8MRT5 1133 aa10.36□□□□□ -0.75
VARS-227ENST00000489979 TEX22C9J3V5 150 aa10.36□□□□□ -0.75
VARS-227ENST00000489979 SLC17A2O00624 439 aa10.36□□□□□ -0.75
VARS-227ENST00000489979 MRPS15P82914 257 aaKnown RBP10.36□□□□□ -0.75
VARS-227ENST00000489979 OR4A47Q6IF82 309 aa10.36□□□□□ -0.75
VARS-227ENST00000489979 LAIR2Q6ISS4 152 aa10.36□□□□□ -0.75
VARS-227ENST00000489979 RBPMS2Q6ZRY4 209 aaKnown RBP10.36□□□□□ -0.75
VARS-227ENST00000489979 MAFIPQ8WZ33 124 aa10.36□□□□□ -0.75
VARS-227ENST00000489979 RNF183Q96D59 192 aa10.36□□□□□ -0.75
VARS-227ENST00000489979 FANCD2OSQ96PS1 177 aa10.36□□□□□ -0.75
VARS-227ENST00000489979 DCUN1D5Q9BTE7 237 aa10.36□□□□□ -0.75
VARS-227ENST00000489979 UBQLN2Q9UHD9 624 aa10.36□□□□□ -0.75
VARS-227ENST00000489979 PSORS1C1Q9UIG5 152 aa10.36□□□□□ -0.75
VARS-227ENST00000489979 DNAH2Q9P225 4427 aa10.35□□□□□ -0.75
VARS-227ENST00000489979 DPPA5A6NC42 116 aa10.35□□□□□ -0.75
VARS-227ENST00000489979 UBE2CO00762 179 aa10.35□□□□□ -0.75
VARS-227ENST00000489979 FCGR3BO75015 233 aa10.35□□□□□ -0.75
VARS-227ENST00000489979 FCGR3AP08637 254 aa10.35□□□□□ -0.75
VARS-227ENST00000489979 IL6RP08887 468 aaPredicted RBP10.35□□□□□ -0.75
VARS-227ENST00000489979 UCHL1P09936 223 aa10.35□□□□□ -0.75
VARS-227ENST00000489979 CLDN12P56749 244 aa10.35□□□□□ -0.75
VARS-227ENST00000489979 RAB11BQ15907 218 aa10.35□□□□□ -0.75
VARS-227ENST00000489979 ZNF585BQ52M93 769 aa10.35□□□□□ -0.75
VARS-227ENST00000489979 UNQ9165/PRO28630Q6UXU0 137 aa10.35□□□□□ -0.75
VARS-227ENST00000489979 OR2C3Q8N628 320 aa10.35□□□□□ -0.75
VARS-227ENST00000489979 TMEM217Q8N7C4 229 aa10.35□□□□□ -0.75
VARS-227ENST00000489979 OR56B1Q8NGI3 324 aa10.35□□□□□ -0.75
VARS-227ENST00000489979 EEF1AKMT3Q96AZ1 226 aa10.35□□□□□ -0.75
VARS-227ENST00000489979 FYTTD1Q96QD9 318 aaKnown RBP10.35□□□□□ -0.75
VARS-227ENST00000489979 GINS4Q9BRT9 223 aa10.35□□□□□ -0.75
VARS-227ENST00000489979 KCNK7Q9Y2U2 307 aa10.35□□□□□ -0.75
VARS-227ENST00000489979 AK6Q9Y3D8 172 aaKnown RBP10.35□□□□□ -0.75
VARS-227ENST00000489979 DYNC1H1Q14204 4646 aaKnown RBP10.35□□□□□ -0.75
VARS-227ENST00000489979 DNAH17Q9UFH2 4485 aa10.35□□□□□ -0.75
VARS-227ENST00000489979 E7EUB6 86 aa10.34□□□□□ -0.75
VARS-227ENST00000489979 DIRAS3O95661 229 aa10.34□□□□□ -0.75
VARS-227ENST00000489979 CDK1P06493 297 aa10.34□□□□□ -0.75
VARS-227ENST00000489979 C8orf88P0DMB2 117 aa10.34□□□□□ -0.75
VARS-227ENST00000489979 RPL27AP46776 148 aaKnown RBP10.34□□□□□ -0.75
VARS-227ENST00000489979 SLC38A6Q8IZM9 456 aa10.34□□□□□ -0.75
VARS-227ENST00000489979 VKORC1L1Q8N0U8 176 aa10.34□□□□□ -0.75
VARS-227ENST00000489979 STPG3Q8N7X2 389 aa10.34□□□□□ -0.75
VARS-227ENST00000489979 MARC2Q969Z3 335 aa10.34□□□□□ -0.75
VARS-227ENST00000489979 SLC2A9Q9NRM0 540 aa10.34□□□□□ -0.75
VARS-227ENST00000489979 KIR2DL5BA0A0G2JN68 375 aa10.33□□□□□ -0.76
VARS-227ENST00000489979 KIR2DL5BA0A0G2JPC4 375 aa10.33□□□□□ -0.76
VARS-227ENST00000489979 A0A1B0GW64 132 aa10.33□□□□□ -0.76
VARS-227ENST00000489979 J3QRK9 145 aa10.33□□□□□ -0.76
VARS-227ENST00000489979 DENRO43583 198 aaKnown RBP10.33□□□□□ -0.76
VARS-227ENST00000489979 CRYGCP07315 174 aa10.33□□□□□ -0.76
VARS-227ENST00000489979 AREGP15514 252 aa10.33□□□□□ -0.76
VARS-227ENST00000489979 RPL35AP18077 110 aaKnown RBP10.33□□□□□ -0.76
VARS-227ENST00000489979 PRR20EP86478 221 aa10.33□□□□□ -0.76
VARS-227ENST00000489979 PRR20CP86479 221 aa10.33□□□□□ -0.76
VARS-227ENST00000489979 PRR20DP86480 221 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms