RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 BEAN1Q3B7T3 259 aa10.44□□□□□ -0.74
CCL28-202ENST00000489442 ETV3LQ6ZN32 361 aa10.44□□□□□ -0.74
CCL28-202ENST00000489442 OVCH2Q7RTZ1 564 aa10.44□□□□□ -0.74
CCL28-202ENST00000489442 LINC00482Q8N8I6 264 aa10.44□□□□□ -0.74
CCL28-202ENST00000489442 ZNF491Q8N8L2 437 aa10.44□□□□□ -0.74
CCL28-202ENST00000489442 OR5M8Q8NGP6 311 aa10.44□□□□□ -0.74
CCL28-202ENST00000489442 OR6F1Q8NGZ6 308 aa10.44□□□□□ -0.74
CCL28-202ENST00000489442 GPX8Q8TED1 209 aa10.44□□□□□ -0.74
CCL28-202ENST00000489442 CASTOR1Q8WTX7 329 aa10.44□□□□□ -0.74
CCL28-202ENST00000489442 C4orf3Q8WVX3 66 aa10.44□□□□□ -0.74
CCL28-202ENST00000489442 RAX2Q96IS3 184 aa10.44□□□□□ -0.74
CCL28-202ENST00000489442 OR5B12Q96R08 314 aa10.44□□□□□ -0.74
CCL28-202ENST00000489442 GPHA2Q96T91 129 aa10.44□□□□□ -0.74
CCL28-202ENST00000489442 PHB2Q99623 299 aa10.44□□□□□ -0.74
CCL28-202ENST00000489442 BCL7BQ9BQE9 202 aa10.44□□□□□ -0.74
CCL28-202ENST00000489442 SCOCQ9UIL1 159 aa10.44□□□□□ -0.74
CCL28-202ENST00000489442 ANAPC10Q9UM13 185 aa10.44□□□□□ -0.74
CCL28-202ENST00000489442 SULT1C2O00338 296 aa10.43□□□□□ -0.74
CCL28-202ENST00000489442 ARPC1BO15143 372 aaKnown RBP10.43□□□□□ -0.74
CCL28-202ENST00000489442 CRYGBP07316 175 aa10.43□□□□□ -0.74
CCL28-202ENST00000489442 SAA1P0DJI8 122 aaPredicted RBP10.43□□□□□ -0.74
CCL28-202ENST00000489442 RCVRNP35243 200 aa10.43□□□□□ -0.74
CCL28-202ENST00000489442 HRH1P35367 487 aa10.43□□□□□ -0.74
CCL28-202ENST00000489442 KIR2DS2P43631 304 aa10.43□□□□□ -0.74
CCL28-202ENST00000489442 PRSS8Q16651 343 aa10.43□□□□□ -0.74
CCL28-202ENST00000489442 RNASE12Q5GAN4 147 aaKnown RBP10.43□□□□□ -0.74
CCL28-202ENST00000489442 DHRS11Q6UWP2 260 aa10.43□□□□□ -0.74
CCL28-202ENST00000489442 LYSMD2Q8IV50 215 aa10.43□□□□□ -0.74
CCL28-202ENST00000489442 OR5T1Q8NG75 326 aa10.43□□□□□ -0.74
CCL28-202ENST00000489442 C15orf40Q8WUR7 153 aa10.43□□□□□ -0.74
CCL28-202ENST00000489442 MS4A10Q96PG2 267 aa10.43□□□□□ -0.74
CCL28-202ENST00000489442 P2RX4Q99571 388 aa10.43□□□□□ -0.74
CCL28-202ENST00000489442 GPR61Q9BZJ8 451 aa10.43□□□□□ -0.74
CCL28-202ENST00000489442 ADAM30Q9UKF2 790 aa10.43□□□□□ -0.74
CCL28-202ENST00000489442 MPPED1O15442 326 aa10.42□□□□□ -0.74
CCL28-202ENST00000489442 WIPF1O43516 503 aa10.42□□□□□ -0.74
CCL28-202ENST00000489442 SOX15O60248 233 aa10.42□□□□□ -0.74
CCL28-202ENST00000489442 HRASP01112 189 aa10.42□□□□□ -0.74
CCL28-202ENST00000489442 TPPP2P59282 170 aa10.42□□□□□ -0.74
CCL28-202ENST00000489442 PDLIM3Q53GG5 364 aaPredicted RBP10.42□□□□□ -0.74
CCL28-202ENST00000489442 C19orf54Q5BKX5 351 aa10.42□□□□□ -0.74
CCL28-202ENST00000489442 AADACL3Q5VUY0 350 aa10.42□□□□□ -0.74
CCL28-202ENST00000489442 ZNF818PQ6ZRF7 136 aa10.42□□□□□ -0.74
CCL28-202ENST00000489442 MMD2Q8IY49 270 aa10.42□□□□□ -0.74
CCL28-202ENST00000489442 VKORC1L1Q8N0U8 176 aa10.42□□□□□ -0.74
CCL28-202ENST00000489442 SPAG16Q8N0X2 631 aa10.42□□□□□ -0.74
CCL28-202ENST00000489442 POC5Q8NA72 575 aa10.42□□□□□ -0.74
CCL28-202ENST00000489442 OR11H1Q8NG94 326 aa10.42□□□□□ -0.74
CCL28-202ENST00000489442 OR51H1Q8NH63 302 aa10.42□□□□□ -0.74
CCL28-202ENST00000489442 VSTM2AQ8TAG5 236 aa10.42□□□□□ -0.74
CCL28-202ENST00000489442 DPF1Q92782 380 aa10.42□□□□□ -0.74
CCL28-202ENST00000489442 TMEM68Q96MH6 324 aa10.42□□□□□ -0.74
CCL28-202ENST00000489442 AIFM2Q9BRQ8 373 aa10.42□□□□□ -0.74
CCL28-202ENST00000489442 MCRIP2Q9BUT9 160 aaKnown RBP10.42□□□□□ -0.74
CCL28-202ENST00000489442 SLA2Q9H6Q3 261 aa10.42□□□□□ -0.74
CCL28-202ENST00000489442 GNB4Q9HAV0 340 aa10.42□□□□□ -0.74
CCL28-202ENST00000489442 CCDC160A6NGH7 325 aa10.41□□□□□ -0.74
CCL28-202ENST00000489442 MSGN1A6NI15 193 aa10.41□□□□□ -0.74
CCL28-202ENST00000489442 OR2A4O95047 310 aa10.41□□□□□ -0.74
CCL28-202ENST00000489442 PRB2P02812 416 aaPredicted RBP10.41□□□□□ -0.74
CCL28-202ENST00000489442 TRGV3P03979 118 aa10.41□□□□□ -0.74
CCL28-202ENST00000489442 IFNA6P05013 189 aa10.41□□□□□ -0.74
CCL28-202ENST00000489442 APELAP0DMC3 54 aa10.41□□□□□ -0.74
CCL28-202ENST00000489442 S100GP29377 79 aa10.41□□□□□ -0.74
CCL28-202ENST00000489442 GNRHRP30968 328 aa10.41□□□□□ -0.74
CCL28-202ENST00000489442 EIF4EBP1Q13541 118 aaPredicted RBP10.41□□□□□ -0.74
CCL28-202ENST00000489442 KIAA0141Q14154 515 aaPredicted RBP10.41□□□□□ -0.74
CCL28-202ENST00000489442 KPRPQ5T749 579 aaPredicted RBP10.41□□□□□ -0.74
CCL28-202ENST00000489442 SSX9Q7RTT3 188 aa10.41□□□□□ -0.74
CCL28-202ENST00000489442 CMTM1Q8IZ96 169 aa10.41□□□□□ -0.74
CCL28-202ENST00000489442 OR1N2Q8NGR9 330 aa10.41□□□□□ -0.74
CCL28-202ENST00000489442 MYOZ3Q8TDC0 251 aa10.41□□□□□ -0.74
CCL28-202ENST00000489442 FCAMRQ8WWV6 532 aa10.41□□□□□ -0.74
CCL28-202ENST00000489442 MOB3AQ96BX8 217 aa10.41□□□□□ -0.74
CCL28-202ENST00000489442 RHOVQ96L33 236 aa10.41□□□□□ -0.74
CCL28-202ENST00000489442 OR2A7Q96R45 310 aa10.41□□□□□ -0.74
CCL28-202ENST00000489442 ZNF430Q9H8G1 570 aaPredicted RBP10.41□□□□□ -0.74
CCL28-202ENST00000489442 CTDSP2O14595 271 aa10.4□□□□□ -0.74
CCL28-202ENST00000489442 TPPPO94811 219 aa10.4□□□□□ -0.74
CCL28-202ENST00000489442 OR8U8P0C7N1 319 aa10.4□□□□□ -0.74
CCL28-202ENST00000489442 SSBP2P81877 361 aaPredicted RBP10.4□□□□□ -0.74
CCL28-202ENST00000489442 ZNF616Q08AN1 781 aa10.4□□□□□ -0.74
CCL28-202ENST00000489442 FOXB2Q5VYV0 432 aa10.4□□□□□ -0.74
CCL28-202ENST00000489442 LPCAT3Q6P1A2 487 aa10.4□□□□□ -0.74
CCL28-202ENST00000489442 LAX1Q8IWV1 398 aa10.4□□□□□ -0.74
CCL28-202ENST00000489442 DYNC2LI1Q8TCX1 351 aa10.4□□□□□ -0.74
CCL28-202ENST00000489442 CD300LFQ8TDQ1 290 aa10.4□□□□□ -0.74
CCL28-202ENST00000489442 SRSF12Q8WXF0 261 aaKnown RBP10.4□□□□□ -0.74
CCL28-202ENST00000489442 SPIN2AQ99865 258 aa10.4□□□□□ -0.74
CCL28-202ENST00000489442 SPIN2BQ9BPZ2 258 aa10.4□□□□□ -0.74
CCL28-202ENST00000489442 C6orf62Q9GZU0 229 aaPredicted RBP10.4□□□□□ -0.74
CCL28-202ENST00000489442 COA4Q9NYJ1 87 aa10.4□□□□□ -0.74
CCL28-202ENST00000489442 CCDC59Q9P031 241 aaKnown RBP10.4□□□□□ -0.74
CCL28-202ENST00000489442 KLK11Q9UBX7 282 aa10.4□□□□□ -0.74
CCL28-202ENST00000489442 C13orf42A0A1B0GVH6 325 aa10.39□□□□□ -0.75
CCL28-202ENST00000489442 H3BMQ9 156 aa10.39□□□□□ -0.75
CCL28-202ENST00000489442 H3BUA1 57 aa10.39□□□□□ -0.75
CCL28-202ENST00000489442 I3L521 148 aa10.39□□□□□ -0.75
CCL28-202ENST00000489442 GPR31O00270 319 aa10.39□□□□□ -0.75
CCL28-202ENST00000489442 RBFOX2O43251 390 aaKnown RBP eCLIP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms