RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 GLAP06280 429 aa10.64□□□□□ -0.71
UFD1-209ENST00000489406 HTN3P15516 51 aa10.64□□□□□ -0.71
UFD1-209ENST00000489406 ZNF19P17023 458 aa10.64□□□□□ -0.71
UFD1-209ENST00000489406 DLK1P80370 383 aa10.64□□□□□ -0.71
UFD1-209ENST00000489406 CBX3Q13185 183 aa10.64□□□□□ -0.71
UFD1-209ENST00000489406 GPR176Q14439 515 aa10.64□□□□□ -0.71
UFD1-209ENST00000489406 STHQ8IWL8 128 aa10.64□□□□□ -0.71
UFD1-209ENST00000489406 ELAC2Q9BQ52 826 aaKnown RBP10.64□□□□□ -0.71
UFD1-209ENST00000489406 C20orf24Q9BUV8 137 aa10.64□□□□□ -0.71
UFD1-209ENST00000489406 SELENOIQ9C0D9 397 aa10.64□□□□□ -0.71
UFD1-209ENST00000489406 TMEM14BQ9NUH8 114 aa10.64□□□□□ -0.71
UFD1-209ENST00000489406 NPIPB5A8MRT5 1133 aa10.63□□□□□ -0.71
UFD1-209ENST00000489406 TEX22C9J3V5 150 aa10.63□□□□□ -0.71
UFD1-209ENST00000489406 DYNC1I1O14576 645 aa10.63□□□□□ -0.71
UFD1-209ENST00000489406 BTF3P20290 206 aaKnown RBP10.63□□□□□ -0.71
UFD1-209ENST00000489406 C4BPBP20851 252 aa10.63□□□□□ -0.71
UFD1-209ENST00000489406 DEFB131AP59861 70 aa10.63□□□□□ -0.71
UFD1-209ENST00000489406 TMEM41BQ5BJD5 291 aa10.63□□□□□ -0.71
UFD1-209ENST00000489406 SETD6Q8TBK2 473 aa10.63□□□□□ -0.71
UFD1-209ENST00000489406 PDCD1LG2Q9BQ51 273 aa10.63□□□□□ -0.71
UFD1-209ENST00000489406 SLC2A9Q9NRM0 540 aa10.63□□□□□ -0.71
UFD1-209ENST00000489406 RPSAP08865 295 aaKnown RBP10.62□□□□□ -0.71
UFD1-209ENST00000489406 TMEM88Q6PEY1 159 aa10.62□□□□□ -0.71
UFD1-209ENST00000489406 ZNF66Q6ZN08 573 aa10.62□□□□□ -0.71
UFD1-209ENST00000489406 OR5AK2Q8NH90 309 aa10.62□□□□□ -0.71
UFD1-209ENST00000489406 GIMAP1Q8WWP7 306 aa10.62□□□□□ -0.71
UFD1-209ENST00000489406 C4orf36Q96KX1 117 aa10.62□□□□□ -0.71
UFD1-209ENST00000489406 CXorf58Q96LI9 332 aa10.62□□□□□ -0.71
UFD1-209ENST00000489406 FYTTD1Q96QD9 318 aaKnown RBP10.62□□□□□ -0.71
UFD1-209ENST00000489406 TMEM138Q9NPI0 162 aa10.62□□□□□ -0.71
UFD1-209ENST00000489406 DAPL1A0PJW8 107 aa10.61□□□□□ -0.71
UFD1-209ENST00000489406 B2RBV5 119 aa10.61□□□□□ -0.71
UFD1-209ENST00000489406 FAM107AO95990 144 aa10.61□□□□□ -0.71
UFD1-209ENST00000489406 SPART-AS1P0CW21 52 aa10.61□□□□□ -0.71
UFD1-209ENST00000489406 ZBTB25P24278 435 aa10.61□□□□□ -0.71
UFD1-209ENST00000489406 MNAT1P51948 309 aa10.61□□□□□ -0.71
UFD1-209ENST00000489406 SNRPGP62308 76 aaKnown RBP10.61□□□□□ -0.71
UFD1-209ENST00000489406 RTL8BQ17RB0 113 aa10.61□□□□□ -0.71
UFD1-209ENST00000489406 SVOPQ8N4V2 548 aa10.61□□□□□ -0.71
UFD1-209ENST00000489406 C15orf53Q8NAA6 179 aa10.61□□□□□ -0.71
UFD1-209ENST00000489406 CSNK1G2-AS1Q8NCQ2 148 aa10.61□□□□□ -0.71
UFD1-209ENST00000489406 ZNF502Q8TBZ5 544 aa10.61□□□□□ -0.71
UFD1-209ENST00000489406 PTX4Q96A99 478 aa10.61□□□□□ -0.71
UFD1-209ENST00000489406 OR2A7Q96R45 310 aa10.61□□□□□ -0.71
UFD1-209ENST00000489406 PGPEP1Q9NXJ5 209 aa10.61□□□□□ -0.71
UFD1-209ENST00000489406 PDCD6O75340 191 aa10.6□□□□□ -0.71
UFD1-209ENST00000489406 RAP2AP10114 183 aa10.6□□□□□ -0.71
UFD1-209ENST00000489406 AREGP15514 252 aa10.6□□□□□ -0.71
UFD1-209ENST00000489406 HIST1H1BP16401 226 aaKnown RBP10.6□□□□□ -0.71
UFD1-209ENST00000489406 MGMTP16455 207 aa10.6□□□□□ -0.71
UFD1-209ENST00000489406 BDKRB2P30411 391 aa10.6□□□□□ -0.71
UFD1-209ENST00000489406 EMP1P54849 157 aa10.6□□□□□ -0.71
UFD1-209ENST00000489406 KRTAP10-1P60331 282 aa10.6□□□□□ -0.71
UFD1-209ENST00000489406 HAMPP81172 84 aa10.6□□□□□ -0.71
UFD1-209ENST00000489406 ICAM4Q14773 271 aa10.6□□□□□ -0.71
UFD1-209ENST00000489406 C12orf73Q69YU5 71 aa10.6□□□□□ -0.71
UFD1-209ENST00000489406 GLIPR1L1Q6UWM5 242 aa10.6□□□□□ -0.71
UFD1-209ENST00000489406 MMD2Q8IY49 270 aa10.6□□□□□ -0.71
UFD1-209ENST00000489406 ZNF184Q99676 751 aaPredicted RBP10.6□□□□□ -0.71
UFD1-209ENST00000489406 RHPN1-AS1Q9BWJ2 59 aa10.6□□□□□ -0.71
UFD1-209ENST00000489406 AASSQ9UDR5 926 aa10.6□□□□□ -0.71
UFD1-209ENST00000489406 SMPXQ9UHP9 88 aa10.6□□□□□ -0.71
UFD1-209ENST00000489406 LRP1Q07954 4544 aaKnown RBP10.59□□□□□ -0.71
UFD1-209ENST00000489406 IGLV11-55A0A075B6I3 123 aa10.59□□□□□ -0.71
UFD1-209ENST00000489406 IGHV3-49A0A0A0MS15 119 aa10.59□□□□□ -0.71
UFD1-209ENST00000489406 TMEM212A6NML5 194 aa10.59□□□□□ -0.71
UFD1-209ENST00000489406 E7EUB6 86 aa10.59□□□□□ -0.71
UFD1-209ENST00000489406 K7EMT4 169 aa10.59□□□□□ -0.71
UFD1-209ENST00000489406 CRYZL1O95825 349 aa10.59□□□□□ -0.71
UFD1-209ENST00000489406 DHFRP00374 187 aa10.59□□□□□ -0.71
UFD1-209ENST00000489406 CRYGCP07315 174 aa10.59□□□□□ -0.71
UFD1-209ENST00000489406 IL6RP08887 468 aaPredicted RBP10.59□□□□□ -0.71
UFD1-209ENST00000489406 SAA1P0DJI8 122 aaPredicted RBP10.59□□□□□ -0.71
UFD1-209ENST00000489406 SPP1P10451 314 aa10.59□□□□□ -0.71
UFD1-209ENST00000489406 DEFA4P12838 97 aa10.59□□□□□ -0.71
UFD1-209ENST00000489406 PPP3R1P63098 170 aa10.59□□□□□ -0.71
UFD1-209ENST00000489406 TRPT1Q86TN4 253 aaKnown RBP10.59□□□□□ -0.71
UFD1-209ENST00000489406 MUL1Q969V5 352 aa10.59□□□□□ -0.71
UFD1-209ENST00000489406 ORAI1Q96D31 301 aa10.59□□□□□ -0.71
UFD1-209ENST00000489406 Q96M66 194 aa10.59□□□□□ -0.71
UFD1-209ENST00000489406 FAAP24Q9BTP7 215 aa10.59□□□□□ -0.71
UFD1-209ENST00000489406 THTPAQ9BU02 230 aa10.59□□□□□ -0.71
UFD1-209ENST00000489406 RIBC2Q9H4K1 309 aa10.59□□□□□ -0.71
UFD1-209ENST00000489406 CHMP1AQ9HD42 196 aaPredicted RBP10.59□□□□□ -0.71
UFD1-209ENST00000489406 SMPD3Q9NY59 655 aaPredicted RBP10.59□□□□□ -0.71
UFD1-209ENST00000489406 CHEK1O14757 476 aa10.58□□□□□ -0.72
UFD1-209ENST00000489406 CREBL2O60519 120 aaPredicted RBP10.58□□□□□ -0.72
UFD1-209ENST00000489406 CRTAPO75718 401 aaPredicted RBP10.58□□□□□ -0.72
UFD1-209ENST00000489406 REG1AP05451 166 aa10.58□□□□□ -0.72
UFD1-209ENST00000489406 CDK10Q15131 360 aa10.58□□□□□ -0.72
UFD1-209ENST00000489406 DHFR2Q86XF0 187 aa10.58□□□□□ -0.72
UFD1-209ENST00000489406 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.58□□□□□ -0.72
UFD1-209ENST00000489406 CMTM3Q96MX0 182 aa10.58□□□□□ -0.72
UFD1-209ENST00000489406 SDHAF2Q9NX18 166 aa10.58□□□□□ -0.72
UFD1-209ENST00000489406 TRBV5-7A0A0A0MS05 114 aa10.57□□□□□ -0.72
UFD1-209ENST00000489406 ZAR1LA6NP61 321 aa10.57□□□□□ -0.72
UFD1-209ENST00000489406 E9PI62 339 aa10.57□□□□□ -0.72
UFD1-209ENST00000489406 NDUFA4O00483 81 aa10.57□□□□□ -0.72
UFD1-209ENST00000489406 CD2P06729 351 aa10.57□□□□□ -0.72
UFD1-209ENST00000489406 DAPP51397 102 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms