RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 DEFB131AP59861 70 aa8.17□□□□□ -1.1
HDAC6-233ENST00000489352 UBE2KP61086 200 aa8.17□□□□□ -1.1
HDAC6-233ENST00000489352 PPP3R1P63098 170 aa8.17□□□□□ -1.1
HDAC6-233ENST00000489352 TAGLNQ01995 201 aaKnown RBP8.17□□□□□ -1.1
HDAC6-233ENST00000489352 PTGES3Q15185 160 aaKnown RBP8.17□□□□□ -1.1
HDAC6-233ENST00000489352 HMGN3Q15651 99 aa8.17□□□□□ -1.1
HDAC6-233ENST00000489352 DDI2Q5TDH0 399 aa8.17□□□□□ -1.1
HDAC6-233ENST00000489352 TMEM88Q6PEY1 159 aa8.17□□□□□ -1.1
HDAC6-233ENST00000489352 CEACAM19Q7Z692 300 aa8.17□□□□□ -1.1
HDAC6-233ENST00000489352 IL4I1Q96RQ9 567 aa8.17□□□□□ -1.1
HDAC6-233ENST00000489352 RNF2Q99496 336 aa8.17□□□□□ -1.1
HDAC6-233ENST00000489352 ISG20L2Q9H9L3 353 aaKnown RBP8.17□□□□□ -1.1
HDAC6-233ENST00000489352 CHMP1AQ9HD42 196 aaPredicted RBP8.17□□□□□ -1.1
HDAC6-233ENST00000489352 OR4C45A6NMZ5 311 aa8.16□□□□□ -1.1
HDAC6-233ENST00000489352 NPIPB5A8MRT5 1133 aa8.16□□□□□ -1.1
HDAC6-233ENST00000489352 PROP1O75360 226 aa8.16□□□□□ -1.1
HDAC6-233ENST00000489352 DFFBO76075 338 aa8.16□□□□□ -1.1
HDAC6-233ENST00000489352 REG1AP05451 166 aa8.16□□□□□ -1.1
HDAC6-233ENST00000489352 RRASP10301 218 aa8.16□□□□□ -1.1
HDAC6-233ENST00000489352 CCL18P55774 89 aa8.16□□□□□ -1.1
HDAC6-233ENST00000489352 ZNF85Q03923 595 aa8.16□□□□□ -1.1
HDAC6-233ENST00000489352 TPBGQ13641 420 aa8.16□□□□□ -1.1
HDAC6-233ENST00000489352 ATP6AP1Q15904 470 aa8.16□□□□□ -1.1
HDAC6-233ENST00000489352 TTC32Q5I0X7 151 aa8.16□□□□□ -1.1
HDAC6-233ENST00000489352 CDPF1Q6NVV7 123 aa8.16□□□□□ -1.1
HDAC6-233ENST00000489352 C19orf35Q6ZS72 473 aa8.16□□□□□ -1.1
HDAC6-233ENST00000489352 MMD2Q8IY49 270 aa8.16□□□□□ -1.1
HDAC6-233ENST00000489352 DEFB104AQ8WTQ1 72 aa8.16□□□□□ -1.1
HDAC6-233ENST00000489352 GIMAP1Q8WWP7 306 aa8.16□□□□□ -1.1
HDAC6-233ENST00000489352 FYTTD1Q96QD9 318 aaKnown RBP8.16□□□□□ -1.1
HDAC6-233ENST00000489352 THTPAQ9BU02 230 aa8.16□□□□□ -1.1
HDAC6-233ENST00000489352 SELENOIQ9C0D9 397 aa8.16□□□□□ -1.1
HDAC6-233ENST00000489352 ZNF430Q9H8G1 570 aaPredicted RBP8.16□□□□□ -1.1
HDAC6-233ENST00000489352 TMEM138Q9NPI0 162 aa8.16□□□□□ -1.1
HDAC6-233ENST00000489352 SLC2A9Q9NRM0 540 aa8.16□□□□□ -1.1
HDAC6-233ENST00000489352 TAS2R4Q9NYW5 299 aa8.16□□□□□ -1.1
HDAC6-233ENST00000489352 RAB21Q9UL25 225 aa8.16□□□□□ -1.1
HDAC6-233ENST00000489352 IGHV3OR16-8A0A075B7F1 116 aa8.15□□□□□ -1.1
HDAC6-233ENST00000489352 TEX48A0A1B0GUV7 120 aa8.15□□□□□ -1.1
HDAC6-233ENST00000489352 DAPL1A0PJW8 107 aa8.15□□□□□ -1.1
HDAC6-233ENST00000489352 MFSD2BA6NFX1 497 aa8.15□□□□□ -1.1
HDAC6-233ENST00000489352 J3QLW9 94 aa8.15□□□□□ -1.1
HDAC6-233ENST00000489352 PLA2G1BP04054 148 aaKnown RBP8.15□□□□□ -1.1
HDAC6-233ENST00000489352 CD2P06729 351 aa8.15□□□□□ -1.1
HDAC6-233ENST00000489352 ZNF19P17023 458 aa8.15□□□□□ -1.1
HDAC6-233ENST00000489352 PRKACGP22612 351 aa8.15□□□□□ -1.1
HDAC6-233ENST00000489352 SOX2P48431 317 aa8.15□□□□□ -1.1
HDAC6-233ENST00000489352 C10orf55Q5SWW7 151 aa8.15□□□□□ -1.1
HDAC6-233ENST00000489352 OR5AK2Q8NH90 309 aa8.15□□□□□ -1.1
HDAC6-233ENST00000489352 FANCD2OSQ96PS1 177 aa8.15□□□□□ -1.1
HDAC6-233ENST00000489352 OR14A2Q96R54 314 aa8.15□□□□□ -1.1
HDAC6-233ENST00000489352 NIPSNAP3BQ9BS92 247 aa8.15□□□□□ -1.1
HDAC6-233ENST00000489352 TMEM189A5PLL7 270 aa8.14□□□□□ -1.11
HDAC6-233ENST00000489352 TMEM212A6NML5 194 aa8.14□□□□□ -1.11
HDAC6-233ENST00000489352 K7EMT4 169 aa8.14□□□□□ -1.11
HDAC6-233ENST00000489352 NDUFA4O00483 81 aa8.14□□□□□ -1.11
HDAC6-233ENST00000489352 SLC16A6O15403 523 aa8.14□□□□□ -1.11
HDAC6-233ENST00000489352 PDCD6O75340 191 aa8.14□□□□□ -1.11
HDAC6-233ENST00000489352 GIG44P09565 113 aaPredicted RBP8.14□□□□□ -1.11
HDAC6-233ENST00000489352 GNB3P16520 340 aa8.14□□□□□ -1.11
HDAC6-233ENST00000489352 FUSP35637 526 aaKnown RBP eCLIP8.14□□□□□ -1.11
HDAC6-233ENST00000489352 GSG1LQ6UXU4 331 aa8.14□□□□□ -1.11
HDAC6-233ENST00000489352 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.14□□□□□ -1.11
HDAC6-233ENST00000489352 TMEM116Q8NCL8 245 aa8.14□□□□□ -1.11
HDAC6-233ENST00000489352 ELAC2Q9BQ52 826 aaKnown RBP8.14□□□□□ -1.11
HDAC6-233ENST00000489352 RHPN1-AS1Q9BWJ2 59 aa8.14□□□□□ -1.11
HDAC6-233ENST00000489352 BANF2Q9H503 90 aa8.14□□□□□ -1.11
HDAC6-233ENST00000489352 THYN1Q9P016 225 aa8.14□□□□□ -1.11
HDAC6-233ENST00000489352 SMPXQ9UHP9 88 aa8.14□□□□□ -1.11
HDAC6-233ENST00000489352 OR2T8A6NH00 312 aa8.13□□□□□ -1.11
HDAC6-233ENST00000489352 CRTAPO75718 401 aaPredicted RBP8.13□□□□□ -1.11
HDAC6-233ENST00000489352 CRYZL1O95825 349 aa8.13□□□□□ -1.11
HDAC6-233ENST00000489352 BDKRB2P30411 391 aa8.13□□□□□ -1.11
HDAC6-233ENST00000489352 PSMD7P51665 324 aa8.13□□□□□ -1.11
HDAC6-233ENST00000489352 RPL11P62913 178 aaKnown RBP8.13□□□□□ -1.11
HDAC6-233ENST00000489352 CDK10Q15131 360 aa8.13□□□□□ -1.11
HDAC6-233ENST00000489352 ZNF502Q8TBZ5 544 aa8.13□□□□□ -1.11
HDAC6-233ENST00000489352 MRPL48Q96GC5 212 aaKnown RBP8.13□□□□□ -1.11
HDAC6-233ENST00000489352 ATP6V1G3Q96LB4 118 aa8.13□□□□□ -1.11
HDAC6-233ENST00000489352 NEDD4LQ96PU5 975 aa8.13□□□□□ -1.11
HDAC6-233ENST00000489352 DCUN1D5Q9BTE7 237 aa8.13□□□□□ -1.11
HDAC6-233ENST00000489352 OR1A1Q9P1Q5 309 aa8.13□□□□□ -1.11
HDAC6-233ENST00000489352 TRBV5-7A0A0A0MS05 114 aa8.12□□□□□ -1.11
HDAC6-233ENST00000489352 RPS10-NUDT3A0A1W2PQS6 291 aa8.12□□□□□ -1.11
HDAC6-233ENST00000489352 C15orf62A8K5M9 175 aa8.12□□□□□ -1.11
HDAC6-233ENST00000489352 CHEK1O14757 476 aa8.12□□□□□ -1.11
HDAC6-233ENST00000489352 NUDT3O95989 172 aa8.12□□□□□ -1.11
HDAC6-233ENST00000489352 CD5P06127 495 aa8.12□□□□□ -1.11
HDAC6-233ENST00000489352 EIF4EP06730 217 aaKnown RBP8.12□□□□□ -1.11
HDAC6-233ENST00000489352 RAP2AP10114 183 aa8.12□□□□□ -1.11
HDAC6-233ENST00000489352 MGMTP16455 207 aa8.12□□□□□ -1.11
HDAC6-233ENST00000489352 C4BPBP20851 252 aa8.12□□□□□ -1.11
HDAC6-233ENST00000489352 RPL27AP46776 148 aaKnown RBP8.12□□□□□ -1.11
HDAC6-233ENST00000489352 GLIPR1L1Q6UWM5 242 aa8.12□□□□□ -1.11
HDAC6-233ENST00000489352 TRPT1Q86TN4 253 aaKnown RBP8.12□□□□□ -1.11
HDAC6-233ENST00000489352 HS3ST5Q8IZT8 346 aa8.12□□□□□ -1.11
HDAC6-233ENST00000489352 OSR1Q8TAX0 266 aaPredicted RBP8.12□□□□□ -1.11
HDAC6-233ENST00000489352 DNAJC9Q8WXX5 260 aa8.12□□□□□ -1.11
HDAC6-233ENST00000489352 RFKQ969G6 155 aa8.12□□□□□ -1.11
HDAC6-233ENST00000489352 PTX4Q96A99 478 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms