RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 ANOS1P23352 680 aa15.01□□□□□ -0.01
NPHP4-209ENST00000489180 DMRT1Q9Y5R6 373 aa15.01□□□□□ -0.01
NPHP4-209ENST00000489180 FOLR2P14207 255 aa15.01□□□□□ -0.01
NPHP4-209ENST00000489180 C7orf71A4D174 169 aa15.01□□□□□ -0.01
NPHP4-209ENST00000489180 ZNF658BQ4V348 819 aaPredicted RBP15.01□□□□□ -0.01
NPHP4-209ENST00000489180 TMEM171Q8WVE6 324 aa15.01□□□□□ -0.01
NPHP4-209ENST00000489180 OR5P3Q8WZ94 311 aa15.01□□□□□ -0.01
NPHP4-209ENST00000489180 IGHV3OR16-12A0A075B7B8 117 aa15.01□□□□□ -0.01
NPHP4-209ENST00000489180 GCHFRP30047 84 aa15.01□□□□□ -0.01
NPHP4-209ENST00000489180 NPIPB3Q92617 1050 aa15.01□□□□□ -0.01
NPHP4-209ENST00000489180 JPT1Q9UK76 154 aa15.01□□□□□ -0.01
NPHP4-209ENST00000489180 COL5A3P25940 1745 aaPredicted RBP15□□□□□ -0.01
NPHP4-209ENST00000489180 IGHV3-35A0A0C4DH35 117 aa15□□□□□ -0.01
NPHP4-209ENST00000489180 AHRRA9YTQ3 701 aa15□□□□□ -0.01
NPHP4-209ENST00000489180 UCP3P55916 312 aa15□□□□□ -0.01
NPHP4-209ENST00000489180 CENPWQ5EE01 88 aa15□□□□□ -0.01
NPHP4-209ENST00000489180 EBLN2Q6P2I7 272 aa15□□□□□ -0.01
NPHP4-209ENST00000489180 C12orf54Q6X4T0 127 aa15□□□□□ -0.01
NPHP4-209ENST00000489180 MAP1LC3AQ9H492 121 aa15□□□□□ -0.01
NPHP4-209ENST00000489180 ZDHHC8Q9ULC8 765 aa15□□□□□ -0.01
NPHP4-209ENST00000489180 CCDC88CQ9P219 2028 aa15□□□□□ -0.01
NPHP4-209ENST00000489180 IGKV3-11P04433 115 aa15□□□□□ -0.01
NPHP4-209ENST00000489180 CX3CL1P78423 397 aa15□□□□□ -0.01
NPHP4-209ENST00000489180 MBNL2Q5VZF2 373 aaKnown RBP15□□□□□ -0.01
NPHP4-209ENST00000489180 RPRMQ9NS64 109 aa15□□□□□ -0.01
NPHP4-209ENST00000489180 COL11A2P13942 1736 aaPredicted RBP15□□□□□ -0.01
NPHP4-209ENST00000489180 IGKV3D-11A0A0A0MRZ8 115 aa15□□□□□ -0.01
NPHP4-209ENST00000489180 IFI6P09912 130 aa15□□□□□ -0.01
NPHP4-209ENST00000489180 FAM53AQ6NSI3 398 aaPredicted RBP15□□□□□ -0.01
NPHP4-209ENST00000489180 GOLT1AQ6ZVE7 132 aa15□□□□□ -0.01
NPHP4-209ENST00000489180 BIVMQ86UB2 503 aa15□□□□□ -0.01
NPHP4-209ENST00000489180 TMEM56-RWDD3S4R434 201 aa15□□□□□ -0.01
NPHP4-209ENST00000489180 FTH1P19P0C7X4 201 aa15□□□□□ -0.01
NPHP4-209ENST00000489180 ZNRF1Q8ND25 227 aa15□□□□□ -0.01
NPHP4-209ENST00000489180 OR51G1Q8NGK1 321 aa15□□□□□ -0.01
NPHP4-209ENST00000489180 PIKFYVEQ9Y2I7 2098 aa15□□□□□ -0.01
NPHP4-209ENST00000489180 LTBP4Q8N2S1 1624 aa14.99□□□□□ -0.01
NPHP4-209ENST00000489180 PROB1E7EW31 1015 aa14.99□□□□□ -0.01
NPHP4-209ENST00000489180 SS18L1O75177 396 aaPredicted RBP14.99□□□□□ -0.01
NPHP4-209ENST00000489180 ZNF506Q5JVG8 444 aa14.99□□□□□ -0.01
NPHP4-209ENST00000489180 RIPPLY2Q5TAB7 128 aa14.99□□□□□ -0.01
NPHP4-209ENST00000489180 RFPL3SP0C7P2 107 aa14.99□□□□□ -0.01
NPHP4-209ENST00000489180 ARF6P62330 175 aa14.99□□□□□ -0.01
NPHP4-209ENST00000489180 TFF3Q07654 80 aa14.99□□□□□ -0.01
NPHP4-209ENST00000489180 ATRAIDQ6UW56 229 aa14.99□□□□□ -0.01
NPHP4-209ENST00000489180 RCC1LQ96I51 464 aaKnown RBP14.99□□□□□ -0.01
NPHP4-209ENST00000489180 hCG_38984A0A1B0GV85 526 aa14.99□□□□□ -0.01
NPHP4-209ENST00000489180 ADIPOQQ15848 244 aa14.99□□□□□ -0.01
NPHP4-209ENST00000489180 MIEN1Q9BRT3 115 aa14.99□□□□□ -0.01
NPHP4-209ENST00000489180 RTBDNQ9BSG5 229 aaPredicted RBP14.99□□□□□ -0.01
NPHP4-209ENST00000489180 C10orf128Q5T292 105 aa14.99□□□□□ -0.01
NPHP4-209ENST00000489180 RP1P56715 2156 aa14.98□□□□□ -0.01
NPHP4-209ENST00000489180 SLC17A3O00476 420 aa14.98□□□□□ -0.01
NPHP4-209ENST00000489180 MFAP4P55083 255 aa14.98□□□□□ -0.01
NPHP4-209ENST00000489180 CYB5R2Q6BCY4 276 aa14.98□□□□□ -0.01
NPHP4-209ENST00000489180 ZNF256Q9Y2P7 627 aaPredicted RBP14.98□□□□□ -0.01
NPHP4-209ENST00000489180 RGPD3A6NKT7 1758 aaPredicted RBP14.98□□□□□ -0.01
NPHP4-209ENST00000489180 PPIAL4CA0A0B4J2A2 164 aa14.98□□□□□ -0.01
NPHP4-209ENST00000489180 TGFBR3LH3BV60 316 aa14.98□□□□□ -0.01
NPHP4-209ENST00000489180 GDF9O60383 454 aa14.98□□□□□ -0.01
NPHP4-209ENST00000489180 PPIAL4GP0DN37 164 aa14.98□□□□□ -0.01
NPHP4-209ENST00000489180 SPTBP11277 2137 aa14.98□□□□□ -0.01
NPHP4-209ENST00000489180 HERPUD1Q15011 391 aa14.98□□□□□ -0.01
NPHP4-209ENST00000489180 IMMP2LQ96T52 175 aa14.98□□□□□ -0.01
NPHP4-209ENST00000489180 PHLDA3Q9Y5J5 127 aa14.98□□□□□ -0.01
NPHP4-209ENST00000489180 TMEM238LA0A1B0GVL6 79 aa14.98□□□□□ -0.01
NPHP4-209ENST00000489180 A6NJY4 79 aa14.98□□□□□ -0.01
NPHP4-209ENST00000489180 IL6RP08887 468 aaPredicted RBP14.98□□□□□ -0.01
NPHP4-209ENST00000489180 SPSB2Q99619 263 aa14.98□□□□□ -0.01
NPHP4-209ENST00000489180 NPIPB9F8W1W9 429 aa14.98□□□□□ -0.01
NPHP4-209ENST00000489180 HLA-DRB1P01911 266 aa14.98□□□□□ -0.01
NPHP4-209ENST00000489180 PTGDSP41222 190 aa14.98□□□□□ -0.01
NPHP4-209ENST00000489180 FOXA3P55318 350 aaPredicted RBP14.98□□□□□ -0.01
NPHP4-209ENST00000489180 NPCDR1Q9BY65 106 aa14.98□□□□□ -0.01
NPHP4-209ENST00000489180 WNT10AQ9GZT5 417 aa14.98□□□□□ -0.01
NPHP4-209ENST00000489180 MARVELD3Q96A59 401 aa14.97□□□□□ -0.01
NPHP4-209ENST00000489180 SCARF2Q96GP6 870 aaPredicted RBP14.97□□□□□ -0.01
NPHP4-209ENST00000489180 PILRBQ9UKJ0 227 aa14.97□□□□□ -0.01
NPHP4-209ENST00000489180 A0A087WV48 116 aa14.97□□□□□ -0.01
NPHP4-209ENST00000489180 PRSS8Q16651 343 aa14.97□□□□□ -0.01
NPHP4-209ENST00000489180 TMEM183AQ8IXX5 376 aa14.97□□□□□ -0.01
NPHP4-209ENST00000489180 SCN2AQ99250 2005 aa14.97□□□□□ -0.01
NPHP4-209ENST00000489180 CELA3AP09093 270 aa14.97□□□□□ -0.01
NPHP4-209ENST00000489180 STPG1Q5TH74 334 aa14.97□□□□□ -0.01
NPHP4-209ENST00000489180 LINC00305Q7Z4B0 112 aa14.97□□□□□ -0.01
NPHP4-209ENST00000489180 ST6GALNAC3Q8NDV1 305 aa14.97□□□□□ -0.01
NPHP4-209ENST00000489180 AICDAQ9GZX7 198 aa14.97□□□□□ -0.01
NPHP4-209ENST00000489180 UNC13CQ8NB66 2214 aa14.97□□□□□ -0.01
NPHP4-209ENST00000489180 CTAG1AP78358 180 aa14.97□□□□□ -0.01
NPHP4-209ENST00000489180 NR2C2APQ86WQ0 139 aa14.97□□□□□ -0.01
NPHP4-209ENST00000489180 TRAV14DV4A0A0A6YYC5 116 aa14.97□□□□□ -0.01
NPHP4-209ENST00000489180 PSG9Q00887 426 aa14.97□□□□□ -0.01
NPHP4-209ENST00000489180 PCSK4Q6UW60 755 aa14.97□□□□□ -0.01
NPHP4-209ENST00000489180 STRCP1A6NGW2 1772 aa14.97□□□□□ -0.01
NPHP4-209ENST00000489180 IGHV3-23P01764 117 aa14.96□□□□□ -0.01
NPHP4-209ENST00000489180 COX5BP10606 129 aa14.96□□□□□ -0.01
NPHP4-209ENST00000489180 ZNF146Q15072 292 aa14.96□□□□□ -0.01
NPHP4-209ENST00000489180 LY6EQ16553 131 aa14.96□□□□□ -0.01
NPHP4-209ENST00000489180 OR10AG1Q8NH19 301 aa14.96□□□□□ -0.01
NPHP4-209ENST00000489180 S4R3C0 116 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms