RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 SHOXO15266 292 aa12.84□□□□□ -0.35
CLDN11-208ENST00000488989 ADAP1O75689 374 aa12.84□□□□□ -0.35
CLDN11-208ENST00000488989 MOSP00540 346 aa12.84□□□□□ -0.35
CLDN11-208ENST00000488989 IGLV2-23P01705 113 aa12.84□□□□□ -0.35
CLDN11-208ENST00000488989 SNRNP70P08621 437 aaKnown RBP12.84□□□□□ -0.35
CLDN11-208ENST00000488989 HOXB5P09067 269 aa12.84□□□□□ -0.35
CLDN11-208ENST00000488989 GGNBP1Q5YKI7 109 aa12.84□□□□□ -0.35
CLDN11-208ENST00000488989 OR11H7Q8NGC8 314 aa12.84□□□□□ -0.35
CLDN11-208ENST00000488989 OR5M8Q8NGP6 311 aa12.84□□□□□ -0.35
CLDN11-208ENST00000488989 OR2T10Q8NGZ9 312 aa12.84□□□□□ -0.35
CLDN11-208ENST00000488989 PIFOQ8TCI5 191 aa12.84□□□□□ -0.35
CLDN11-208ENST00000488989 EAF1Q96JC9 268 aaPredicted RBP12.84□□□□□ -0.35
CLDN11-208ENST00000488989 HARBI1Q96MB7 349 aa12.84□□□□□ -0.35
CLDN11-208ENST00000488989 MGAT4CQ9UBM8 478 aa12.84□□□□□ -0.35
CLDN11-208ENST00000488989 MMP24Q9Y5R2 645 aa12.84□□□□□ -0.35
CLDN11-208ENST00000488989 TET2Q6N021 2002 aaPredicted RBP12.83□□□□□ -0.36
CLDN11-208ENST00000488989 A0A0G2JRQ6 117 aa12.83□□□□□ -0.36
CLDN11-208ENST00000488989 KRASP01116 189 aa12.83□□□□□ -0.36
CLDN11-208ENST00000488989 IFNA21P01568 189 aa12.83□□□□□ -0.36
CLDN11-208ENST00000488989 IGKV1D-33P01593 117 aa12.83□□□□□ -0.36
CLDN11-208ENST00000488989 IGKV1-33P01594 117 aa12.83□□□□□ -0.36
CLDN11-208ENST00000488989 SLC25A6P12236 298 aa12.83□□□□□ -0.36
CLDN11-208ENST00000488989 CXCL3P19876 107 aa12.83□□□□□ -0.36
CLDN11-208ENST00000488989 HNF1AP20823 631 aa12.83□□□□□ -0.36
CLDN11-208ENST00000488989 G6PCP35575 357 aa12.83□□□□□ -0.36
CLDN11-208ENST00000488989 RPS16P62249 146 aaKnown RBP12.83□□□□□ -0.36
CLDN11-208ENST00000488989 SRSF4Q08170 494 aaKnown RBP12.83□□□□□ -0.36
CLDN11-208ENST00000488989 LRRC75BQ2VPJ9 315 aa12.83□□□□□ -0.36
CLDN11-208ENST00000488989 DEFB112Q30KQ8 113 aa12.83□□□□□ -0.36
CLDN11-208ENST00000488989 PUSL1Q8N0Z8 303 aaKnown RBP12.83□□□□□ -0.36
CLDN11-208ENST00000488989 GPR146Q96CH1 333 aa12.83□□□□□ -0.36
CLDN11-208ENST00000488989 RBMXL1Q96E39 390 aaKnown RBP12.83□□□□□ -0.36
CLDN11-208ENST00000488989 RITA1Q96K30 269 aa12.83□□□□□ -0.36
CLDN11-208ENST00000488989 RHOVQ96L33 236 aa12.83□□□□□ -0.36
CLDN11-208ENST00000488989 HIVEP2P31629 2446 aa12.82□□□□□ -0.36
CLDN11-208ENST00000488989 CCSO14618 274 aa12.82□□□□□ -0.36
CLDN11-208ENST00000488989 GOSR2O14653 212 aa12.82□□□□□ -0.36
CLDN11-208ENST00000488989 NDUFA3O95167 84 aa12.82□□□□□ -0.36
CLDN11-208ENST00000488989 SPDEFO95238 335 aa12.82□□□□□ -0.36
CLDN11-208ENST00000488989 CRYGBP07316 175 aa12.82□□□□□ -0.36
CLDN11-208ENST00000488989 FAM106CPP0CH98 169 aa12.82□□□□□ -0.36
CLDN11-208ENST00000488989 AKR1C2P52895 323 aa12.82□□□□□ -0.36
CLDN11-208ENST00000488989 UBE2KP61086 200 aa12.82□□□□□ -0.36
CLDN11-208ENST00000488989 ERVK-16P61578 105 aa12.82□□□□□ -0.36
CLDN11-208ENST00000488989 FBLN7Q53RD9 439 aa12.82□□□□□ -0.36
CLDN11-208ENST00000488989 CLEC9AQ6UXN8 241 aa12.82□□□□□ -0.36
CLDN11-208ENST00000488989 IL17RELQ6ZVW7 336 aa12.82□□□□□ -0.36
CLDN11-208ENST00000488989 NPBQ8NG41 125 aa12.82□□□□□ -0.36
CLDN11-208ENST00000488989 RRNAD1Q96FB5 475 aaKnown RBP12.82□□□□□ -0.36
CLDN11-208ENST00000488989 ZNF48Q96MX3 618 aaPredicted RBP12.82□□□□□ -0.36
CLDN11-208ENST00000488989 TSNAXQ99598 290 aaKnown RBP12.82□□□□□ -0.36
CLDN11-208ENST00000488989 SSX3Q99909 188 aa12.82□□□□□ -0.36
CLDN11-208ENST00000488989 BET1LQ9NYM9 111 aa12.82□□□□□ -0.36
CLDN11-208ENST00000488989 PLXNB1O43157 2135 aa12.82□□□□□ -0.36
CLDN11-208ENST00000488989 A0A1B0GU03 582 aa12.81□□□□□ -0.36
CLDN11-208ENST00000488989 MPTX1A8MV57 137 aa12.81□□□□□ -0.36
CLDN11-208ENST00000488989 OR2A4O95047 310 aa12.81□□□□□ -0.36
CLDN11-208ENST00000488989 SAA1P0DJI8 122 aaPredicted RBP12.81□□□□□ -0.36
CLDN11-208ENST00000488989 CD24P25063 80 aa12.81□□□□□ -0.36
CLDN11-208ENST00000488989 SRP14P37108 136 aaKnown RBP12.81□□□□□ -0.36
CLDN11-208ENST00000488989 H2BFSP57053 126 aa12.81□□□□□ -0.36
CLDN11-208ENST00000488989 OR4A47Q6IF82 309 aa12.81□□□□□ -0.36
CLDN11-208ENST00000488989 GSG1LQ6UXU4 331 aa12.81□□□□□ -0.36
CLDN11-208ENST00000488989 Q6ZRM9 215 aa12.81□□□□□ -0.36
CLDN11-208ENST00000488989 H2BFWTQ7Z2G1 175 aa12.81□□□□□ -0.36
CLDN11-208ENST00000488989 TEX45Q8NA69 505 aa12.81□□□□□ -0.36
CLDN11-208ENST00000488989 OR8H1Q8NGG4 311 aa12.81□□□□□ -0.36
CLDN11-208ENST00000488989 VSTM2AQ8TAG5 236 aa12.81□□□□□ -0.36
CLDN11-208ENST00000488989 ASB13Q8WXK3 278 aa12.81□□□□□ -0.36
CLDN11-208ENST00000488989 OR10C1Q96KK4 312 aa12.81□□□□□ -0.36
CLDN11-208ENST00000488989 OR2A7Q96R45 310 aa12.81□□□□□ -0.36
CLDN11-208ENST00000488989 SPIN2AQ99865 258 aa12.81□□□□□ -0.36
CLDN11-208ENST00000488989 SPIN2BQ9BPZ2 258 aa12.81□□□□□ -0.36
CLDN11-208ENST00000488989 PLSCR3Q9NRY6 295 aa12.81□□□□□ -0.36
CLDN11-208ENST00000488989 TMEM140Q9NV12 185 aa12.81□□□□□ -0.36
CLDN11-208ENST00000488989 COA4Q9NYJ1 87 aa12.81□□□□□ -0.36
CLDN11-208ENST00000488989 MXRA5Q9NR99 2828 aa12.81□□□□□ -0.36
CLDN11-208ENST00000488989 ZFHX3Q15911 3703 aa12.81□□□□□ -0.36
CLDN11-208ENST00000488989 MDFIC2A0A1B0GVS7 189 aa12.8□□□□□ -0.36
CLDN11-208ENST00000488989 PITX3O75364 302 aa12.8□□□□□ -0.36
CLDN11-208ENST00000488989 SIX6O95475 246 aa12.8□□□□□ -0.36
CLDN11-208ENST00000488989 FGF2P09038 288 aa12.8□□□□□ -0.36
CLDN11-208ENST00000488989 OR9G9P0C7N8 305 aa12.8□□□□□ -0.36
CLDN11-208ENST00000488989 IL15RAQ13261 267 aa12.8□□□□□ -0.36
CLDN11-208ENST00000488989 PSG5Q15238 335 aa12.8□□□□□ -0.36
CLDN11-208ENST00000488989 VMA21Q3ZAQ7 101 aa12.8□□□□□ -0.36
CLDN11-208ENST00000488989 AARDQ4LEZ3 155 aa12.8□□□□□ -0.36
CLDN11-208ENST00000488989 Q6YL49 198 aa12.8□□□□□ -0.36
CLDN11-208ENST00000488989 VKORC1L1Q8N0U8 176 aa12.8□□□□□ -0.36
CLDN11-208ENST00000488989 DMBX1Q8NFW5 382 aa12.8□□□□□ -0.36
CLDN11-208ENST00000488989 OR4A5Q8NH83 315 aa12.8□□□□□ -0.36
CLDN11-208ENST00000488989 TMEM167AQ8TBQ9 72 aa12.8□□□□□ -0.36
CLDN11-208ENST00000488989 C22orf15Q8WYQ4 148 aa12.8□□□□□ -0.36
CLDN11-208ENST00000488989 C2orf50Q96LR7 162 aa12.8□□□□□ -0.36
CLDN11-208ENST00000488989 TCF19Q9Y242 345 aa12.8□□□□□ -0.36
CLDN11-208ENST00000488989 F8P00451 2351 aa12.8□□□□□ -0.36
CLDN11-208ENST00000488989 A6NDX4 124 aa12.79□□□□□ -0.36
CLDN11-208ENST00000488989 UPK2O00526 184 aa12.79□□□□□ -0.36
CLDN11-208ENST00000488989 RRHO14718 337 aa12.79□□□□□ -0.36
CLDN11-208ENST00000488989 NBR2O15453 112 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 157.4 ms