RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 CAV2P51636 162 aa15.76■□□□□ 0.11
CCM2-216ENST00000488727 SLC25A31Q9H0C2 315 aa15.76■□□□□ 0.11
CCM2-216ENST00000488727 GAL3ST2Q9H3Q3 398 aa15.76■□□□□ 0.11
CCM2-216ENST00000488727 CALYQ9NYX4 217 aa15.76■□□□□ 0.11
CCM2-216ENST00000488727 TRAV40A0A0B4J280 105 aa15.75■□□□□ 0.11
CCM2-216ENST00000488727 KBTBD11-OT1A0A1B0GTJ5 212 aa15.75■□□□□ 0.11
CCM2-216ENST00000488727 A0A1B0GU03 582 aa15.75■□□□□ 0.11
CCM2-216ENST00000488727 PITX3O75364 302 aa15.75■□□□□ 0.11
CCM2-216ENST00000488727 FBXO24O75426 580 aa15.75■□□□□ 0.11
CCM2-216ENST00000488727 RBP4P02753 201 aa15.75■□□□□ 0.11
CCM2-216ENST00000488727 IGHV1-8P0DP01 117 aa15.75■□□□□ 0.11
CCM2-216ENST00000488727 IGHV4-38-2P0DP08 117 aa15.75■□□□□ 0.11
CCM2-216ENST00000488727 PRTN3P24158 256 aa15.75■□□□□ 0.11
CCM2-216ENST00000488727 F2RL1P55085 397 aa15.75■□□□□ 0.11
CCM2-216ENST00000488727 POLR2GP62487 172 aaKnown RBP eCLIP15.75■□□□□ 0.11
CCM2-216ENST00000488727 KLRD1Q13241 179 aa15.75■□□□□ 0.11
CCM2-216ENST00000488727 PRAMEF5Q5TYX0 476 aa15.75■□□□□ 0.11
CCM2-216ENST00000488727 SPAG16Q8N0X2 631 aa15.75■□□□□ 0.11
CCM2-216ENST00000488727 LSM10Q969L4 123 aaKnown RBP15.75■□□□□ 0.11
CCM2-216ENST00000488727 NARS2Q96I59 477 aaKnown RBP15.75■□□□□ 0.11
CCM2-216ENST00000488727 KCNIP1Q9NZI2 227 aa15.75■□□□□ 0.11
CCM2-216ENST00000488727 CARHSP1Q9Y2V2 147 aaKnown RBP15.75■□□□□ 0.11
CCM2-216ENST00000488727 IGHV3OR16-10A0A075B7F0 116 aa15.74■□□□□ 0.11
CCM2-216ENST00000488727 IGSF23A1L1A6 192 aa15.74■□□□□ 0.11
CCM2-216ENST00000488727 RNASEK-C17orf49H0YIS7 233 aa15.74■□□□□ 0.11
CCM2-216ENST00000488727 C15orf65H3BRN8 121 aa15.74■□□□□ 0.11
CCM2-216ENST00000488727 HSPA12AO43301 675 aa15.74■□□□□ 0.11
CCM2-216ENST00000488727 ATG12O94817 140 aa15.74■□□□□ 0.11
CCM2-216ENST00000488727 HOXB4P17483 251 aaPredicted RBP15.74■□□□□ 0.11
CCM2-216ENST00000488727 NHLH2Q02577 135 aa15.74■□□□□ 0.11
CCM2-216ENST00000488727 BTN1A1Q13410 526 aa15.74■□□□□ 0.11
CCM2-216ENST00000488727 HCP5Q6MZN7 132 aa15.74■□□□□ 0.11
CCM2-216ENST00000488727 HEPN1Q6WQI6 88 aa15.74■□□□□ 0.11
CCM2-216ENST00000488727 RFESDQ8TAC1 157 aa15.74■□□□□ 0.11
CCM2-216ENST00000488727 UBALD1Q8TB05 177 aa15.74■□□□□ 0.11
CCM2-216ENST00000488727 LHX4Q969G2 390 aa15.74■□□□□ 0.11
CCM2-216ENST00000488727 LINC00574Q9H8X3 128 aa15.74■□□□□ 0.11
CCM2-216ENST00000488727 LIN7CQ9NUP9 197 aaKnown RBP15.74■□□□□ 0.11
CCM2-216ENST00000488727 hCG_1809904A0A1W2PP81 198 aa15.74■□□□□ 0.11
CCM2-216ENST00000488727 A0A1W2PPE2 198 aa15.74■□□□□ 0.11
CCM2-216ENST00000488727 A0A1W2PR64 198 aa15.74■□□□□ 0.11
CCM2-216ENST00000488727 A0A1W2PRV1 198 aa15.74■□□□□ 0.11
CCM2-216ENST00000488727 C12orf77C9JDV5 145 aa15.74■□□□□ 0.11
CCM2-216ENST00000488727 SERPINE2P07093 398 aa15.74■□□□□ 0.11
CCM2-216ENST00000488727 GZMHP20718 246 aa15.74■□□□□ 0.11
CCM2-216ENST00000488727 RAB5CP51148 216 aa15.74■□□□□ 0.11
CCM2-216ENST00000488727 VAMP2P63027 116 aa15.74■□□□□ 0.11
CCM2-216ENST00000488727 BAXQ07812 192 aa15.74■□□□□ 0.11
CCM2-216ENST00000488727 MSMO1Q15800 293 aa15.74■□□□□ 0.11
CCM2-216ENST00000488727 CXorf66Q5JRM2 361 aaPredicted RBP15.74■□□□□ 0.11
CCM2-216ENST00000488727 Q6ZRG5 221 aa15.74■□□□□ 0.11
CCM2-216ENST00000488727 ZBTB34Q8NCN2 500 aa15.74■□□□□ 0.11
CCM2-216ENST00000488727 OR51H1Q8NH63 302 aa15.74■□□□□ 0.11
CCM2-216ENST00000488727 NANPQ8TBE9 248 aa15.74■□□□□ 0.11
CCM2-216ENST00000488727 HRH4Q9H3N8 390 aa15.74■□□□□ 0.11
CCM2-216ENST00000488727 MXRA5Q9NR99 2828 aa15.74■□□□□ 0.11
CCM2-216ENST00000488727 CENPVL3A0A0U1RRI6 287 aa15.73■□□□□ 0.11
CCM2-216ENST00000488727 FAM24AA6NFZ4 105 aa15.73■□□□□ 0.11
CCM2-216ENST00000488727 SSSCA1O60232 199 aa15.73■□□□□ 0.11
CCM2-216ENST00000488727 ADCYAP1P18509 176 aa15.73■□□□□ 0.11
CCM2-216ENST00000488727 TAGLNQ01995 201 aaKnown RBP15.73■□□□□ 0.11
CCM2-216ENST00000488727 ZNF266Q14584 549 aa15.73■□□□□ 0.11
CCM2-216ENST00000488727 UTF1Q5T230 341 aa15.73■□□□□ 0.11
CCM2-216ENST00000488727 ATRAIDQ6UW56 229 aa15.73■□□□□ 0.11
CCM2-216ENST00000488727 TMEM252Q8N6L7 170 aa15.73■□□□□ 0.11
CCM2-216ENST00000488727 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.73■□□□□ 0.11
CCM2-216ENST00000488727 GPR146Q96CH1 333 aa15.73■□□□□ 0.11
CCM2-216ENST00000488727 STRAPQ9Y3F4 350 aaKnown RBP15.73■□□□□ 0.11
CCM2-216ENST00000488727 RNF212BA8MTL3 300 aa15.72■□□□□ 0.11
CCM2-216ENST00000488727 HNF1AP20823 631 aa15.72■□□□□ 0.11
CCM2-216ENST00000488727 CEACAM6P40199 344 aa15.72■□□□□ 0.11
CCM2-216ENST00000488727 DEFA5Q01523 94 aa15.72■□□□□ 0.11
CCM2-216ENST00000488727 PRR18Q8N4B5 295 aa15.72■□□□□ 0.11
CCM2-216ENST00000488727 COMMD1Q8N668 190 aa15.72■□□□□ 0.11
CCM2-216ENST00000488727 CDC42EP3Q9UKI2 254 aa15.72■□□□□ 0.11
CCM2-216ENST00000488727 NAV3Q8IVL0 2385 aa15.72■□□□□ 0.11
CCM2-216ENST00000488727 A0A0G2JRQ6 117 aa15.71■□□□□ 0.11
CCM2-216ENST00000488727 IGKV1-39P01597 117 aa15.71■□□□□ 0.11
CCM2-216ENST00000488727 IGKV1D-39P04432 117 aa15.71■□□□□ 0.11
CCM2-216ENST00000488727 SRSF3P84103 164 aaKnown RBP15.71■□□□□ 0.11
CCM2-216ENST00000488727 SVBPQ8N300 66 aa15.71■□□□□ 0.11
CCM2-216ENST00000488727 GALMQ96C23 342 aa15.71■□□□□ 0.11
CCM2-216ENST00000488727 NKX6-2Q9C056 277 aaPredicted RBP15.71■□□□□ 0.11
CCM2-216ENST00000488727 UQCC1Q9NVA1 299 aa15.71■□□□□ 0.11
CCM2-216ENST00000488727 WRBO00258 174 aa15.71■□□□□ 0.1
CCM2-216ENST00000488727 HBZP02008 142 aa15.71■□□□□ 0.1
CCM2-216ENST00000488727 LTC4SQ16873 150 aa15.71■□□□□ 0.1
CCM2-216ENST00000488727 RUSC1-AS1Q66K80 236 aa15.71■□□□□ 0.1
CCM2-216ENST00000488727 NCR3LG1Q68D85 454 aa15.71■□□□□ 0.1
CCM2-216ENST00000488727 FAM53AQ6NSI3 398 aaPredicted RBP15.71■□□□□ 0.1
CCM2-216ENST00000488727 TRAT1Q6PIZ9 186 aa15.71■□□□□ 0.1
CCM2-216ENST00000488727 BRD3OSQ6XYD6 125 aa15.71■□□□□ 0.1
CCM2-216ENST00000488727 LURAP1LQ8IV03 231 aa15.71■□□□□ 0.1
CCM2-216ENST00000488727 ODF3L1Q8IXM7 274 aa15.71■□□□□ 0.1
CCM2-216ENST00000488727 PNKDQ8N490 385 aa15.71■□□□□ 0.1
CCM2-216ENST00000488727 DRAM1Q8N682 238 aa15.71■□□□□ 0.1
CCM2-216ENST00000488727 ZNF645Q8N7E2 425 aa15.71■□□□□ 0.1
CCM2-216ENST00000488727 OR1L1Q8NH94 360 aa15.71■□□□□ 0.1
CCM2-216ENST00000488727 TSNAXQ99598 290 aaKnown RBP15.71■□□□□ 0.1
CCM2-216ENST00000488727 SEC11CQ9BY50 192 aa15.71■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms