RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 SLC25A6P12236 298 aa16.59■□□□□ 0.25
NECAB3-213ENST00000488489 DAOP14920 347 aa16.59■□□□□ 0.25
NECAB3-213ENST00000488489 CDKN1AP38936 164 aa16.59■□□□□ 0.25
NECAB3-213ENST00000488489 RAB7AP51149 207 aa16.59■□□□□ 0.25
NECAB3-213ENST00000488489 HEPN1Q6WQI6 88 aa16.59■□□□□ 0.25
NECAB3-213ENST00000488489 ZNF251Q9BRH9 671 aa16.59■□□□□ 0.25
NECAB3-213ENST00000488489 TUBA4BQ9H853 241 aa16.59■□□□□ 0.25
NECAB3-213ENST00000488489 SAA2-SAA4A0A096LPE2 208 aa16.58■□□□□ 0.25
NECAB3-213ENST00000488489 C1QL1O75973 258 aa16.58■□□□□ 0.25
NECAB3-213ENST00000488489 SAA2P0DJI9 122 aaPredicted RBP16.58■□□□□ 0.25
NECAB3-213ENST00000488489 G6PCP35575 357 aa16.58■□□□□ 0.25
NECAB3-213ENST00000488489 NEU4Q8WWR8 484 aaPredicted RBP16.58■□□□□ 0.25
NECAB3-213ENST00000488489 UBR5O95071 2799 aaPredicted RBP16.58■□□□□ 0.24
NECAB3-213ENST00000488489 TMEM50AO95807 157 aa16.58■□□□□ 0.24
NECAB3-213ENST00000488489 AKR1C3P42330 323 aa16.58■□□□□ 0.24
NECAB3-213ENST00000488489 DLX6P56179 175 aa16.58■□□□□ 0.24
NECAB3-213ENST00000488489 CRYBG3Q68DQ2 2970 aa16.58■□□□□ 0.24
NECAB3-213ENST00000488489 GAB2Q9UQC2 676 aa16.58■□□□□ 0.24
NECAB3-213ENST00000488489 C7orf77A4D0Y5 90 aa16.57■□□□□ 0.24
NECAB3-213ENST00000488489 SSSCA1O60232 199 aa16.57■□□□□ 0.24
NECAB3-213ENST00000488489 NDUFS7O75251 213 aa16.57■□□□□ 0.24
NECAB3-213ENST00000488489 MT-ND4LP03901 98 aa16.57■□□□□ 0.24
NECAB3-213ENST00000488489 P0C879 139 aa16.57■□□□□ 0.24
NECAB3-213ENST00000488489 MRPS11P82912 194 aaKnown RBP16.57■□□□□ 0.24
NECAB3-213ENST00000488489 TMEM30BQ3MIR4 351 aa16.57■□□□□ 0.24
NECAB3-213ENST00000488489 SLC25A48Q6ZT89 311 aaKnown RBP16.57■□□□□ 0.24
NECAB3-213ENST00000488489 LYG1Q8N1E2 194 aa16.57■□□□□ 0.24
NECAB3-213ENST00000488489 TCTEX1D1Q8N7M0 179 aa16.57■□□□□ 0.24
NECAB3-213ENST00000488489 OR10A7Q8NGE5 316 aa16.57■□□□□ 0.24
NECAB3-213ENST00000488489 RAB29O14966 203 aa16.57■□□□□ 0.24
NECAB3-213ENST00000488489 EIF3GO75821 320 aaKnown RBP eCLIP16.57■□□□□ 0.24
NECAB3-213ENST00000488489 TMEM155Q4W5P6 130 aa16.57■□□□□ 0.24
NECAB3-213ENST00000488489 EIF5A2Q9GZV4 153 aaKnown RBP16.57■□□□□ 0.24
NECAB3-213ENST00000488489 SH3BGRL3Q9H299 93 aa16.57■□□□□ 0.24
NECAB3-213ENST00000488489 MMP24Q9Y5R2 645 aa16.57■□□□□ 0.24
NECAB3-213ENST00000488489 LRRK2Q5S007 2527 aa16.56■□□□□ 0.24
NECAB3-213ENST00000488489 PPIHO43447 177 aaKnown RBP16.56■□□□□ 0.24
NECAB3-213ENST00000488489 SNRNP70P08621 437 aaKnown RBP16.56■□□□□ 0.24
NECAB3-213ENST00000488489 FHITP49789 147 aa16.56■□□□□ 0.24
NECAB3-213ENST00000488489 SNRPEP62304 92 aaKnown RBP16.56■□□□□ 0.24
NECAB3-213ENST00000488489 C11orf42Q8N5U0 333 aa16.56■□□□□ 0.24
NECAB3-213ENST00000488489 C5orf52A6NGY3 159 aa16.55■□□□□ 0.24
NECAB3-213ENST00000488489 CHST1O43916 411 aa16.55■□□□□ 0.24
NECAB3-213ENST00000488489 FCGR3BO75015 233 aa16.55■□□□□ 0.24
NECAB3-213ENST00000488489 NHLH2Q02577 135 aa16.55■□□□□ 0.24
NECAB3-213ENST00000488489 DDB2Q92466 427 aa16.55■□□□□ 0.24
NECAB3-213ENST00000488489 RBMXL1Q96E39 390 aaKnown RBP16.55■□□□□ 0.24
NECAB3-213ENST00000488489 PRH1P02810 166 aa16.55■□□□□ 0.24
NECAB3-213ENST00000488489 HSD17B11Q8NBQ5 300 aa16.55■□□□□ 0.24
NECAB3-213ENST00000488489 LFNGQ8NES3 379 aa16.55■□□□□ 0.24
NECAB3-213ENST00000488489 PBDC1Q9BVG4 233 aa16.55■□□□□ 0.24
NECAB3-213ENST00000488489 UBE2CO00762 179 aa16.54■□□□□ 0.24
NECAB3-213ENST00000488489 PAX9P55771 341 aa16.54■□□□□ 0.24
NECAB3-213ENST00000488489 EWSR1Q01844 656 aaKnown RBP eCLIP16.54■□□□□ 0.241e-6■■■□□ 16.2
NECAB3-213ENST00000488489 ZNF295-AS1Q8N0V1 137 aa16.54■□□□□ 0.24
NECAB3-213ENST00000488489 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.54■□□□□ 0.24
NECAB3-213ENST00000488489 A0A1B0GW64 132 aa16.54■□□□□ 0.24
NECAB3-213ENST00000488489 FAM24AA6NFZ4 105 aa16.54■□□□□ 0.24
NECAB3-213ENST00000488489 UMAD1C9J7I0 102 aa16.54■□□□□ 0.24
NECAB3-213ENST00000488489 M0R036 132 aa16.54■□□□□ 0.24
NECAB3-213ENST00000488489 RHEBQ15382 184 aa16.54■□□□□ 0.24
NECAB3-213ENST00000488489 OR2C3Q8N628 320 aa16.54■□□□□ 0.24
NECAB3-213ENST00000488489 CD300LFQ8TDQ1 290 aa16.54■□□□□ 0.24
NECAB3-213ENST00000488489 RAB1CQ92928 201 aa16.54■□□□□ 0.24
NECAB3-213ENST00000488489 CHODLQ9H9P2 273 aa16.54■□□□□ 0.24
NECAB3-213ENST00000488489 ARHGAP32A7KAX9 2087 aa16.54■□□□□ 0.24
NECAB3-213ENST00000488489 VPS13CQ709C8 3753 aa16.53■□□□□ 0.24
NECAB3-213ENST00000488489 TRBV23-1A0A0A0MS06 115 aa16.53■□□□□ 0.24
NECAB3-213ENST00000488489 S100A8P05109 93 aa16.53■□□□□ 0.24
NECAB3-213ENST00000488489 TMEM182Q6ZP80 229 aaPredicted RBP16.53■□□□□ 0.24
NECAB3-213ENST00000488489 SLC35B3Q9H1N7 401 aa16.53■□□□□ 0.24
NECAB3-213ENST00000488489 FAM208BQ5VWN6 2430 aa16.53■□□□□ 0.24
NECAB3-213ENST00000488489 MARCH11A6NNE9 402 aa16.52■□□□□ 0.24
NECAB3-213ENST00000488489 SMIM6P0DI80 62 aa16.52■□□□□ 0.24
NECAB3-213ENST00000488489 ZNF383Q8NA42 475 aa16.52■□□□□ 0.24
NECAB3-213ENST00000488489 TIMD4Q96H15 378 aa16.52■□□□□ 0.24
NECAB3-213ENST00000488489 LYRM2Q9NU23 88 aaPredicted RBP16.52■□□□□ 0.24
NECAB3-213ENST00000488489 A0A1W2PPH5 198 aa16.52■□□□□ 0.23
NECAB3-213ENST00000488489 IGSF23A1L1A6 192 aa16.52■□□□□ 0.23
NECAB3-213ENST00000488489 S100A6P06703 90 aa16.52■□□□□ 0.23
NECAB3-213ENST00000488489 WDR25Q64LD2 544 aaPredicted RBP16.52■□□□□ 0.23
NECAB3-213ENST00000488489 ISOC2Q96AB3 205 aa16.52■□□□□ 0.23
NECAB3-213ENST00000488489 S1PR3Q99500 378 aa16.52■□□□□ 0.23
NECAB3-213ENST00000488489 MIOXQ9UGB7 285 aa16.52■□□□□ 0.23
NECAB3-213ENST00000488489 WRBO00258 174 aa16.51■□□□□ 0.23
NECAB3-213ENST00000488489 RBFOX2O43251 390 aaKnown RBP eCLIP16.51■□□□□ 0.233e-7■■■■□ 19.7
NECAB3-213ENST00000488489 HPRT1P00492 218 aa16.51■□□□□ 0.23
NECAB3-213ENST00000488489 IGHV1-8P0DP01 117 aa16.51■□□□□ 0.23
NECAB3-213ENST00000488489 OR8B3Q8NGG8 313 aa16.51■□□□□ 0.23
NECAB3-213ENST00000488489 FAM213BQ8TBF2 198 aa16.51■□□□□ 0.23
NECAB3-213ENST00000488489 R3HDM4Q96D70 268 aa16.51■□□□□ 0.23
NECAB3-213ENST00000488489 NEIL1Q96FI4 390 aaPredicted RBP16.51■□□□□ 0.23
NECAB3-213ENST00000488489 OR8B2Q96RD0 313 aa16.51■□□□□ 0.23
NECAB3-213ENST00000488489 C20orf24Q9BUV8 137 aa16.51■□□□□ 0.23
NECAB3-213ENST00000488489 FBXO7Q9Y3I1 522 aa16.51■□□□□ 0.23
NECAB3-213ENST00000488489 SPG11Q96JI7 2443 aa16.51■□□□□ 0.23
NECAB3-213ENST00000488489 MED13LQ71F56 2210 aa16.51■□□□□ 0.23
NECAB3-213ENST00000488489 RAB5AP20339 215 aa16.51■□□□□ 0.23
NECAB3-213ENST00000488489 SULT1A1P50225 295 aa16.51■□□□□ 0.23
NECAB3-213ENST00000488489 DLX1P56177 255 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms