RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 ATP23Q9Y6H3 246 aa11.45□□□□□ -0.58
COPS7B-221ENST00000488111 ZNF462Q96JM2 2506 aa11.45□□□□□ -0.58
COPS7B-221ENST00000488111 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.45□□□□□ -0.58
COPS7B-221ENST00000488111 A0A1W2PPQ1 181 aa11.45□□□□□ -0.58
COPS7B-221ENST00000488111 IQCF6A8MYZ5 107 aa11.45□□□□□ -0.58
COPS7B-221ENST00000488111 BRS3P32247 399 aa11.45□□□□□ -0.58
COPS7B-221ENST00000488111 SRP14P37108 136 aaKnown RBP11.45□□□□□ -0.58
COPS7B-221ENST00000488111 MDH2P40926 338 aaKnown RBP11.45□□□□□ -0.58
COPS7B-221ENST00000488111 FUT6P51993 359 aa11.45□□□□□ -0.58
COPS7B-221ENST00000488111 PRSS8Q16651 343 aa11.45□□□□□ -0.58
COPS7B-221ENST00000488111 CEACAM21Q3KPI0 293 aa11.45□□□□□ -0.58
COPS7B-221ENST00000488111 MBNL2Q5VZF2 373 aaKnown RBP11.45□□□□□ -0.58
COPS7B-221ENST00000488111 BRICD5Q6PL45 260 aa11.45□□□□□ -0.58
COPS7B-221ENST00000488111 CALHM1Q8IU99 346 aa11.45□□□□□ -0.58
COPS7B-221ENST00000488111 BATF2Q8N1L9 274 aa11.45□□□□□ -0.58
COPS7B-221ENST00000488111 OR2T10Q8NGZ9 312 aa11.45□□□□□ -0.58
COPS7B-221ENST00000488111 NEUROG1Q92886 237 aa11.45□□□□□ -0.58
COPS7B-221ENST00000488111 DIRC2Q96SL1 478 aa11.45□□□□□ -0.58
COPS7B-221ENST00000488111 OR51I2Q9H344 312 aa11.45□□□□□ -0.58
COPS7B-221ENST00000488111 TAAR3PQ9P1P4 343 aa11.45□□□□□ -0.58
COPS7B-221ENST00000488111 LHFPL2Q6ZUX7 228 aa11.44□□□□□ -0.58
COPS7B-221ENST00000488111 SSX8Q7RTT4 187 aa11.44□□□□□ -0.58
COPS7B-221ENST00000488111 SCGB1C1Q8TD33 95 aa11.44□□□□□ -0.58
COPS7B-221ENST00000488111 OR5P3Q8WZ94 311 aa11.44□□□□□ -0.58
COPS7B-221ENST00000488111 MAP1LC3B2A6NCE7 125 aa11.43□□□□□ -0.58
COPS7B-221ENST00000488111 TMEM250H0YL14 139 aa11.43□□□□□ -0.58
COPS7B-221ENST00000488111 C19orf84I3L1E1 186 aa11.43□□□□□ -0.58
COPS7B-221ENST00000488111 SLC33A1O00400 549 aaPredicted RBP11.43□□□□□ -0.58
COPS7B-221ENST00000488111 SIAH2O43255 324 aa11.43□□□□□ -0.58
COPS7B-221ENST00000488111 ZNF737O75373 536 aa11.43□□□□□ -0.58
COPS7B-221ENST00000488111 PLAUP00749 431 aa11.43□□□□□ -0.58
COPS7B-221ENST00000488111 SELEP16581 610 aa11.43□□□□□ -0.58
COPS7B-221ENST00000488111 KITLGP21583 273 aa11.43□□□□□ -0.58
COPS7B-221ENST00000488111 SERF2P84101 59 aa11.43□□□□□ -0.58
COPS7B-221ENST00000488111 PIGYQ3MUY2 71 aa11.43□□□□□ -0.58
COPS7B-221ENST00000488111 Q6ZR03 302 aa11.43□□□□□ -0.58
COPS7B-221ENST00000488111 DTD1Q8TEA8 209 aa11.43□□□□□ -0.58
COPS7B-221ENST00000488111 IL22RA2Q969J5 263 aa11.43□□□□□ -0.58
COPS7B-221ENST00000488111 MIEN1Q9BRT3 115 aa11.43□□□□□ -0.58
COPS7B-221ENST00000488111 MAP1LC3BQ9GZQ8 125 aa11.43□□□□□ -0.58
COPS7B-221ENST00000488111 MPC1Q9Y5U8 109 aa11.43□□□□□ -0.58
COPS7B-221ENST00000488111 NXPH3O95157 252 aa11.43□□□□□ -0.58
COPS7B-221ENST00000488111 IL6RP08887 468 aaPredicted RBP11.43□□□□□ -0.58
COPS7B-221ENST00000488111 MEF2BQ02080 365 aaPredicted RBP11.43□□□□□ -0.58
COPS7B-221ENST00000488111 TMEM41BQ5BJD5 291 aa11.43□□□□□ -0.58
COPS7B-221ENST00000488111 TBX15Q96SF7 602 aa11.43□□□□□ -0.58
COPS7B-221ENST00000488111 TUBG2Q9NRH3 451 aa11.43□□□□□ -0.58
COPS7B-221ENST00000488111 MLNRO43193 412 aa11.42□□□□□ -0.58
COPS7B-221ENST00000488111 YPEL1O60688 119 aa11.42□□□□□ -0.58
COPS7B-221ENST00000488111 PDCD6O75340 191 aa11.42□□□□□ -0.58
COPS7B-221ENST00000488111 RPL15P61313 204 aaKnown RBP11.42□□□□□ -0.58
COPS7B-221ENST00000488111 LCN2P80188 198 aa11.42□□□□□ -0.58
COPS7B-221ENST00000488111 TMEM267Q0VDI3 215 aaPredicted RBP11.42□□□□□ -0.58
COPS7B-221ENST00000488111 CLEC12BQ2HXU8 276 aa11.42□□□□□ -0.58
COPS7B-221ENST00000488111 DMRTA1Q5VZB9 504 aa11.42□□□□□ -0.58
COPS7B-221ENST00000488111 ZNF818PQ6ZRF7 136 aa11.42□□□□□ -0.58
COPS7B-221ENST00000488111 C1orf174Q8IYL3 243 aa11.42□□□□□ -0.58
COPS7B-221ENST00000488111 OSR2Q8N2R0 312 aa11.42□□□□□ -0.58
COPS7B-221ENST00000488111 ZNF525Q8N782 197 aa11.42□□□□□ -0.58
COPS7B-221ENST00000488111 OR5A2Q8NGI9 324 aa11.42□□□□□ -0.58
COPS7B-221ENST00000488111 MS4A10Q96PG2 267 aa11.42□□□□□ -0.58
COPS7B-221ENST00000488111 TECTBQ96PL2 329 aa11.42□□□□□ -0.58
COPS7B-221ENST00000488111 YPEL2Q96QA6 119 aa11.42□□□□□ -0.58
COPS7B-221ENST00000488111 HS3ST6Q96QI5 342 aa11.42□□□□□ -0.58
COPS7B-221ENST00000488111 SPTBN1Q01082 2364 aaKnown RBP11.42□□□□□ -0.58
COPS7B-221ENST00000488111 IGKV1-12A0A0C4DH73 117 aa11.42□□□□□ -0.58
COPS7B-221ENST00000488111 TMEM238LA0A1B0GVL6 79 aa11.42□□□□□ -0.58
COPS7B-221ENST00000488111 ZNF705FA8MVS1 300 aaPredicted RBP11.42□□□□□ -0.58
COPS7B-221ENST00000488111 KIAA1324LA8MWY0 1029 aaPredicted RBP11.42□□□□□ -0.58
COPS7B-221ENST00000488111 SHISA9B4DS77 424 aa11.42□□□□□ -0.58
COPS7B-221ENST00000488111 C3orf80F5H4A9 247 aa11.42□□□□□ -0.58
COPS7B-221ENST00000488111 IGKV1D-12P01611 117 aa11.42□□□□□ -0.58
COPS7B-221ENST00000488111 CD3EP07766 207 aa11.42□□□□□ -0.58
COPS7B-221ENST00000488111 ZNF705DP0CH99 300 aaPredicted RBP11.42□□□□□ -0.58
COPS7B-221ENST00000488111 ZNF705BP0CI00 300 aaPredicted RBP11.42□□□□□ -0.58
COPS7B-221ENST00000488111 KLF3P57682 345 aaPredicted RBP11.42□□□□□ -0.58
COPS7B-221ENST00000488111 SPIN3Q5JUX0 258 aa11.42□□□□□ -0.58
COPS7B-221ENST00000488111 TEX43Q6ZNM6 134 aa11.42□□□□□ -0.58
COPS7B-221ENST00000488111 NUP37Q8NFH4 326 aa11.42□□□□□ -0.58
COPS7B-221ENST00000488111 OR5D13Q8NGL4 314 aa11.42□□□□□ -0.58
COPS7B-221ENST00000488111 PINX1Q96BK5 328 aaKnown RBP11.42□□□□□ -0.58
COPS7B-221ENST00000488111 RAB40CQ96S21 281 aa11.42□□□□□ -0.58
COPS7B-221ENST00000488111 IGHV3-13P01766 116 aa11.41□□□□□ -0.58
COPS7B-221ENST00000488111 LRRC75BQ2VPJ9 315 aa11.41□□□□□ -0.58
COPS7B-221ENST00000488111 WDR86Q86TI4 376 aa11.41□□□□□ -0.58
COPS7B-221ENST00000488111 GAPTQ8N292 157 aa11.41□□□□□ -0.58
COPS7B-221ENST00000488111 ZNF611Q8N823 705 aa11.41□□□□□ -0.58
COPS7B-221ENST00000488111 RPUSD4Q96CM3 377 aaKnown RBP11.41□□□□□ -0.58
COPS7B-221ENST00000488111 PARLQ9H300 379 aa11.41□□□□□ -0.58
COPS7B-221ENST00000488111 IL36GQ9NZH8 169 aa11.41□□□□□ -0.58
COPS7B-221ENST00000488111 KMT2BQ9UMN6 2715 aaPredicted RBP11.41□□□□□ -0.58
COPS7B-221ENST00000488111 H3BP45 60 aa11.41□□□□□ -0.58
COPS7B-221ENST00000488111 GRPP07492 148 aa11.41□□□□□ -0.58
COPS7B-221ENST00000488111 ADIPOQQ15848 244 aa11.41□□□□□ -0.58
COPS7B-221ENST00000488111 Q6ZS49 121 aa11.41□□□□□ -0.58
COPS7B-221ENST00000488111 TMEM256Q8N2U0 113 aa11.41□□□□□ -0.58
COPS7B-221ENST00000488111 PARD6GQ9BYG4 376 aaPredicted RBP11.41□□□□□ -0.58
COPS7B-221ENST00000488111 COL12A1Q99715 3063 aa11.4□□□□□ -0.58
COPS7B-221ENST00000488111 ICE1Q9Y2F5 2266 aa11.4□□□□□ -0.58
COPS7B-221ENST00000488111 DEFB108AA8MXU0 73 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms