RNA–Protein interactions for RNA: ENST00000487894.5

HMG20B-212, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 1,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-212ENST00000487894 OR4S2Q8NH73 311 aa13.27□□□□□ -0.29
HMG20B-212ENST00000487894 MIXL1Q9H2W2 232 aa13.27□□□□□ -0.29
HMG20B-212ENST00000487894 GNB4Q9HAV0 340 aa13.27□□□□□ -0.29
HMG20B-212ENST00000487894 EXTL2Q9UBQ6 330 aa13.27□□□□□ -0.29
HMG20B-212ENST00000487894 SULT1C2O00338 296 aa13.26□□□□□ -0.29
HMG20B-212ENST00000487894 HLA-DMAP28067 261 aa13.26□□□□□ -0.29
HMG20B-212ENST00000487894 HRH1P35367 487 aa13.26□□□□□ -0.29
HMG20B-212ENST00000487894 RAB9AP51151 201 aa13.26□□□□□ -0.29
HMG20B-212ENST00000487894 HERV-K104P61576 105 aa13.26□□□□□ -0.29
HMG20B-212ENST00000487894 ACTBL2Q562R1 376 aa13.26□□□□□ -0.29
HMG20B-212ENST00000487894 DHRS11Q6UWP2 260 aa13.26□□□□□ -0.29
HMG20B-212ENST00000487894 ZNF818PQ6ZRF7 136 aa13.26□□□□□ -0.29
HMG20B-212ENST00000487894 ZBTB34Q8NCN2 500 aa13.26□□□□□ -0.29
HMG20B-212ENST00000487894 DYNC2LI1Q8TCX1 351 aa13.26□□□□□ -0.29
HMG20B-212ENST00000487894 CASTOR1Q8WTX7 329 aa13.26□□□□□ -0.29
HMG20B-212ENST00000487894 MOB3AQ96BX8 217 aa13.26□□□□□ -0.29
HMG20B-212ENST00000487894 UBE2E2Q96LR5 201 aa13.26□□□□□ -0.29
HMG20B-212ENST00000487894 ZNF2Q9BSG1 426 aaPredicted RBP13.26□□□□□ -0.29
HMG20B-212ENST00000487894 FXYD6Q9H0Q3 95 aa13.26□□□□□ -0.29
HMG20B-212ENST00000487894 CCDC59Q9P031 241 aaKnown RBP13.26□□□□□ -0.29
HMG20B-212ENST00000487894 CCL24O00175 119 aa13.25□□□□□ -0.29
HMG20B-212ENST00000487894 CNIH1O95406 144 aa13.25□□□□□ -0.29
HMG20B-212ENST00000487894 RCVRNP35243 200 aa13.25□□□□□ -0.29
HMG20B-212ENST00000487894 PRSS8Q16651 343 aa13.25□□□□□ -0.29
HMG20B-212ENST00000487894 ASPHD1Q5U4P2 390 aa13.25□□□□□ -0.29
HMG20B-212ENST00000487894 LAX1Q8IWV1 398 aa13.25□□□□□ -0.29
HMG20B-212ENST00000487894 OR5M8Q8NGP6 311 aa13.25□□□□□ -0.29
HMG20B-212ENST00000487894 RCC1LQ96I51 464 aaKnown RBP13.25□□□□□ -0.29
HMG20B-212ENST00000487894 DCUN1D5Q9BTE7 237 aa13.25□□□□□ -0.29
HMG20B-212ENST00000487894 VSIG4Q9Y279 399 aa13.25□□□□□ -0.29
HMG20B-212ENST00000487894 H3BMQ9 156 aa13.24□□□□□ -0.29
HMG20B-212ENST00000487894 I3L521 148 aa13.24□□□□□ -0.29
HMG20B-212ENST00000487894 GNRHRP30968 328 aa13.24□□□□□ -0.29
HMG20B-212ENST00000487894 KIR2DS2P43631 304 aa13.24□□□□□ -0.29
HMG20B-212ENST00000487894 RUNX1Q01196 453 aa13.24□□□□□ -0.29
HMG20B-212ENST00000487894 FHL3Q13643 280 aa13.24□□□□□ -0.29
HMG20B-212ENST00000487894 PDLIM3Q53GG5 364 aaPredicted RBP13.24□□□□□ -0.29
HMG20B-212ENST00000487894 RNASE12Q5GAN4 147 aaKnown RBP13.24□□□□□ -0.29
HMG20B-212ENST00000487894 PYHIN1Q6K0P9 492 aa13.24□□□□□ -0.29
HMG20B-212ENST00000487894 ISOC1Q96CN7 298 aa13.24□□□□□ -0.29
HMG20B-212ENST00000487894 ZNF430Q9H8G1 570 aaPredicted RBP13.24□□□□□ -0.29
HMG20B-212ENST00000487894 TGP01266 2768 aa13.23□□□□□ -0.29
HMG20B-212ENST00000487894 CTDSP2O14595 271 aa13.23□□□□□ -0.29
HMG20B-212ENST00000487894 RGS5O15539 181 aa13.23□□□□□ -0.29
HMG20B-212ENST00000487894 RAMP3O60896 148 aa13.23□□□□□ -0.29
HMG20B-212ENST00000487894 NOL3O60936 208 aaKnown RBP13.23□□□□□ -0.29
HMG20B-212ENST00000487894 CATR1Q13166 79 aa13.23□□□□□ -0.29
HMG20B-212ENST00000487894 TNXAQ16473 311 aa13.23□□□□□ -0.29
HMG20B-212ENST00000487894 VKORC1L1Q8N0U8 176 aa13.23□□□□□ -0.29
HMG20B-212ENST00000487894 OR5B12Q96R08 314 aa13.23□□□□□ -0.29
HMG20B-212ENST00000487894 ABHD1Q96SE0 405 aa13.23□□□□□ -0.29
HMG20B-212ENST00000487894 RBFOX2O43251 390 aaKnown RBP eCLIP13.22□□□□□ -0.29
HMG20B-212ENST00000487894 TPPPO94811 219 aa13.22□□□□□ -0.29
HMG20B-212ENST00000487894 KBTBD11O94819 623 aa13.22□□□□□ -0.29
HMG20B-212ENST00000487894 DUS4LO95620 317 aaKnown RBP13.22□□□□□ -0.29
HMG20B-212ENST00000487894 FOXB2Q5VYV0 432 aa13.22□□□□□ -0.29
HMG20B-212ENST00000487894 MMD2Q8IY49 270 aa13.22□□□□□ -0.29
HMG20B-212ENST00000487894 SPAG16Q8N0X2 631 aa13.22□□□□□ -0.29
HMG20B-212ENST00000487894 PUSL1Q8N0Z8 303 aaKnown RBP13.22□□□□□ -0.29
HMG20B-212ENST00000487894 OR11H1Q8NG94 326 aa13.22□□□□□ -0.29
HMG20B-212ENST00000487894 OR6F1Q8NGZ6 308 aa13.22□□□□□ -0.29
HMG20B-212ENST00000487894 OR51H1Q8NH63 302 aa13.22□□□□□ -0.29
HMG20B-212ENST00000487894 OR52I2Q8NH67 350 aa13.22□□□□□ -0.29
HMG20B-212ENST00000487894 SRSF12Q8WXF0 261 aaKnown RBP13.22□□□□□ -0.29
HMG20B-212ENST00000487894 BORCS5Q969J3 196 aa13.22□□□□□ -0.29
HMG20B-212ENST00000487894 KLK11Q9UBX7 282 aa13.22□□□□□ -0.29
HMG20B-212ENST00000487894 SCOCQ9UIL1 159 aa13.22□□□□□ -0.29
HMG20B-212ENST00000487894 CEPT1Q9Y6K0 416 aa13.22□□□□□ -0.29
HMG20B-212ENST00000487894 CREBL2O60519 120 aaPredicted RBP13.21□□□□□ -0.29
HMG20B-212ENST00000487894 PRB2P02812 416 aaPredicted RBP13.21□□□□□ -0.29
HMG20B-212ENST00000487894 RAB25P57735 213 aa13.21□□□□□ -0.29
HMG20B-212ENST00000487894 TPPP2P59282 170 aa13.21□□□□□ -0.29
HMG20B-212ENST00000487894 C10orf55Q5SWW7 151 aa13.21□□□□□ -0.29
HMG20B-212ENST00000487894 POC5Q8NA72 575 aa13.21□□□□□ -0.29
HMG20B-212ENST00000487894 OR5T1Q8NG75 326 aa13.21□□□□□ -0.29
HMG20B-212ENST00000487894 VSTM2AQ8TAG5 236 aa13.21□□□□□ -0.29
HMG20B-212ENST00000487894 TMEM167AQ8TBQ9 72 aa13.21□□□□□ -0.29
HMG20B-212ENST00000487894 RHOVQ96L33 236 aa13.21□□□□□ -0.29
HMG20B-212ENST00000487894 TMEM68Q96MH6 324 aa13.21□□□□□ -0.29
HMG20B-212ENST00000487894 MS4A10Q96PG2 267 aa13.21□□□□□ -0.29
HMG20B-212ENST00000487894 SLIRPQ9GZT3 109 aaKnown RBP13.21□□□□□ -0.29
HMG20B-212ENST00000487894 ALX4Q9H161 411 aaPredicted RBP13.21□□□□□ -0.29
HMG20B-212ENST00000487894 SLA2Q9H6Q3 261 aa13.21□□□□□ -0.29
HMG20B-212ENST00000487894 H3BUA1 57 aa13.2□□□□□ -0.3
HMG20B-212ENST00000487894 M0QYG6 137 aa13.2□□□□□ -0.3
HMG20B-212ENST00000487894 OR2A4O95047 310 aa13.2□□□□□ -0.3
HMG20B-212ENST00000487894 HRASP01112 189 aa13.2□□□□□ -0.3
HMG20B-212ENST00000487894 RLN1P04808 185 aa13.2□□□□□ -0.3
HMG20B-212ENST00000487894 LGALS1P09382 135 aaKnown RBP13.2□□□□□ -0.3
HMG20B-212ENST00000487894 APELAP0DMC3 54 aa13.2□□□□□ -0.3
HMG20B-212ENST00000487894 TSPAN5P62079 268 aa13.2□□□□□ -0.3
HMG20B-212ENST00000487894 VAX1Q5SQQ9 334 aa13.2□□□□□ -0.3
HMG20B-212ENST00000487894 AADACL3Q5VUY0 350 aa13.2□□□□□ -0.3
HMG20B-212ENST00000487894 OR2A7Q96R45 310 aa13.2□□□□□ -0.3
HMG20B-212ENST00000487894 PHB2Q99623 299 aa13.2□□□□□ -0.3
HMG20B-212ENST00000487894 MTFP1Q9UDX5 166 aa13.2□□□□□ -0.3
HMG20B-212ENST00000487894 MSGN1A6NI15 193 aa13.19□□□□□ -0.3
HMG20B-212ENST00000487894 GPR31O00270 319 aa13.19□□□□□ -0.3
HMG20B-212ENST00000487894 HPRT1P00492 218 aa13.19□□□□□ -0.3
HMG20B-212ENST00000487894 IGHV3-11P01762 117 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms