RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 IBA57-AS1B1ANH7 110 aa0.22□□□□□ -2.37
SMC4-219ENST00000487747 LGALS1P09382 135 aaKnown RBP0.22□□□□□ -2.37
SMC4-219ENST00000487747 LINC00614P0C842 121 aa0.22□□□□□ -2.37
SMC4-219ENST00000487747 PVALBP20472 110 aaPredicted RBP0.22□□□□□ -2.37
SMC4-219ENST00000487747 KDELR2P33947 212 aa0.22□□□□□ -2.37
SMC4-219ENST00000487747 RPL28P46779 137 aaKnown RBP0.22□□□□□ -2.37
SMC4-219ENST00000487747 ETV1P50549 477 aa0.22□□□□□ -2.37
SMC4-219ENST00000487747 TAS2R20P59543 309 aa0.22□□□□□ -2.37
SMC4-219ENST00000487747 RPS24P62847 133 aaKnown RBP0.22□□□□□ -2.37
SMC4-219ENST00000487747 ELOBQ15370 118 aa0.22□□□□□ -2.37
SMC4-219ENST00000487747 SURF2Q15527 256 aaPredicted RBP0.22□□□□□ -2.37
SMC4-219ENST00000487747 PLPPR5Q32ZL2 321 aa0.22□□□□□ -2.37
SMC4-219ENST00000487747 ZNF705AQ6ZN79 300 aaPredicted RBP0.22□□□□□ -2.37
SMC4-219ENST00000487747 RPS19BP1Q86WX3 136 aaKnown RBP0.22□□□□□ -2.37
SMC4-219ENST00000487747 OR5L1Q8NGL2 311 aa0.22□□□□□ -2.37
SMC4-219ENST00000487747 C19orf60Q96EN9 201 aa0.22□□□□□ -2.37
SMC4-219ENST00000487747 NMNAT3Q96T66 252 aa0.22□□□□□ -2.37
SMC4-219ENST00000487747 CHST6Q9GZX3 395 aa0.22□□□□□ -2.37
SMC4-219ENST00000487747 TP53TG1Q9Y2A0 90 aa0.22□□□□□ -2.37
SMC4-219ENST00000487747 TIMM9Q9Y5J7 89 aa0.22□□□□□ -2.37
SMC4-219ENST00000487747 LHFPL6Q9Y693 200 aa0.22□□□□□ -2.37
SMC4-219ENST00000487747 EXPH5Q8NEV8 1989 aa0.22□□□□□ -2.37
SMC4-219ENST00000487747 STRCQ7RTU9 1775 aa0.22□□□□□ -2.37
SMC4-219ENST00000487747 NUP160Q12769 1436 aa0.21□□□□□ -2.38
SMC4-219ENST00000487747 RIMS2Q9UQ26 1411 aa0.21□□□□□ -2.38
SMC4-219ENST00000487747 ALPK2Q86TB3 2170 aa0.21□□□□□ -2.38
SMC4-219ENST00000487747 TEX50A0A1B0GTY4 177 aa0.21□□□□□ -2.38
SMC4-219ENST00000487747 DAPL1A0PJW8 107 aa0.21□□□□□ -2.38
SMC4-219ENST00000487747 ZNF879B4DU55 563 aa0.21□□□□□ -2.38
SMC4-219ENST00000487747 DEFA4P12838 97 aa0.21□□□□□ -2.38
SMC4-219ENST00000487747 CXCL2P19875 107 aa0.21□□□□□ -2.38
SMC4-219ENST00000487747 RAB14P61106 215 aa0.21□□□□□ -2.38
SMC4-219ENST00000487747 HIST1H4AP62805 103 aaKnown RBP0.21□□□□□ -2.38
SMC4-219ENST00000487747 EMX1Q04741 257 aaPredicted RBP0.21□□□□□ -2.38
SMC4-219ENST00000487747 SLAMF1Q13291 335 aa0.21□□□□□ -2.38
SMC4-219ENST00000487747 GNA13Q14344 377 aa0.21□□□□□ -2.38
SMC4-219ENST00000487747 EBPQ15125 230 aaKnown RBP0.21□□□□□ -2.38
SMC4-219ENST00000487747 LRRC75BQ2VPJ9 315 aa0.21□□□□□ -2.38
SMC4-219ENST00000487747 AADACL4Q5VUY2 407 aa0.21□□□□□ -2.38
SMC4-219ENST00000487747 FAM173BQ6P4H8 233 aa0.21□□□□□ -2.38
SMC4-219ENST00000487747 FAM19A2Q8N3H0 131 aa0.21□□□□□ -2.38
SMC4-219ENST00000487747 RIBC1Q8N443 379 aaPredicted RBP0.21□□□□□ -2.38
SMC4-219ENST00000487747 RPP25LQ8N5L8 163 aaKnown RBP0.21□□□□□ -2.38
SMC4-219ENST00000487747 ZNF75CPQ92670 426 aaPredicted RBP0.21□□□□□ -2.38
SMC4-219ENST00000487747 RBP7Q96R05 134 aa0.21□□□□□ -2.38
SMC4-219ENST00000487747 MROQ9BYG7 248 aa0.21□□□□□ -2.38
SMC4-219ENST00000487747 METTL9Q9H1A3 318 aa0.21□□□□□ -2.38
SMC4-219ENST00000487747 OR52A5Q9H2C5 316 aa0.21□□□□□ -2.38
SMC4-219ENST00000487747 C1orf109Q9NX04 203 aa0.21□□□□□ -2.38
SMC4-219ENST00000487747 HDGFL3Q9Y3E1 203 aa0.21□□□□□ -2.38
SMC4-219ENST00000487747 GMEB1Q9Y692 573 aa0.21□□□□□ -2.38
SMC4-219ENST00000487747 HEATR5AQ86XA9 2040 aa0.21□□□□□ -2.38
SMC4-219ENST00000487747 A0A1W2PP64 1363 aa0.2□□□□□ -2.38
SMC4-219ENST00000487747 TONSLQ96HA7 1378 aa0.2□□□□□ -2.38
SMC4-219ENST00000487747 GLI3P10071 1580 aa0.2□□□□□ -2.38
SMC4-219ENST00000487747 TMED7-TICAM2A0A0A6YYA0 188 aa0.2□□□□□ -2.38
SMC4-219ENST00000487747 IGKV1-9A0A0C4DH69 117 aa0.2□□□□□ -2.38
SMC4-219ENST00000487747 MEIS3P1A6NDR6 274 aa0.2□□□□□ -2.38
SMC4-219ENST00000487747 GOLGA6L10A6NI86 522 aa0.2□□□□□ -2.38
SMC4-219ENST00000487747 H3BT86 120 aa0.2□□□□□ -2.38
SMC4-219ENST00000487747 AZIN1O14977 448 aa0.2□□□□□ -2.38
SMC4-219ENST00000487747 CREBL2O60519 120 aaPredicted RBP0.2□□□□□ -2.38
SMC4-219ENST00000487747 ADAP1O75689 374 aa0.2□□□□□ -2.38
SMC4-219ENST00000487747 NPPAP01160 153 aa0.2□□□□□ -2.38
SMC4-219ENST00000487747 HLA-DQB2P05538 268 aa0.2□□□□□ -2.38
SMC4-219ENST00000487747 TFPTP0C1Z6 253 aa0.2□□□□□ -2.38
SMC4-219ENST00000487747 RNASE3P12724 160 aaKnown RBP0.2□□□□□ -2.38
SMC4-219ENST00000487747 CXCL3P19876 107 aa0.2□□□□□ -2.38
SMC4-219ENST00000487747 GRPRP30550 384 aa0.2□□□□□ -2.38
SMC4-219ENST00000487747 CDK9P50750 372 aaKnown RBP0.2□□□□□ -2.38
SMC4-219ENST00000487747 AKR1C1Q04828 323 aa0.2□□□□□ -2.38
SMC4-219ENST00000487747 SMAGPQ0VAQ4 97 aa0.2□□□□□ -2.38
SMC4-219ENST00000487747 ZNHIT3Q15649 155 aaPredicted RBP0.2□□□□□ -2.38
SMC4-219ENST00000487747 HLA-DRB5Q30154 266 aa0.2□□□□□ -2.38
SMC4-219ENST00000487747 C10orf55Q5SWW7 151 aa0.2□□□□□ -2.38
SMC4-219ENST00000487747 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.2□□□□□ -2.38
SMC4-219ENST00000487747 TMA16Q96EY4 203 aaKnown RBP0.2□□□□□ -2.38
SMC4-219ENST00000487747 SLC22A4Q9H015 551 aa0.2□□□□□ -2.38
SMC4-219ENST00000487747 TNRC6BQ9UPQ9 1833 aaKnown RBP0.2□□□□□ -2.38
SMC4-219ENST00000487747 TRAV38-1A0A0B4J264 116 aa0.19□□□□□ -2.38
SMC4-219ENST00000487747 TMEM213A2RRL7 107 aa0.19□□□□□ -2.38
SMC4-219ENST00000487747 TRAPPC2LH3BP13 241 aa0.19□□□□□ -2.38
SMC4-219ENST00000487747 CCRL2O00421 344 aa0.19□□□□□ -2.38
SMC4-219ENST00000487747 TOX3O15405 576 aaPredicted RBP0.19□□□□□ -2.38
SMC4-219ENST00000487747 ORC5O43913 435 aa0.19□□□□□ -2.38
SMC4-219ENST00000487747 SCN2BO60939 215 aa0.19□□□□□ -2.38
SMC4-219ENST00000487747 APOMO95445 188 aa0.19□□□□□ -2.38
SMC4-219ENST00000487747 KRT75O95678 551 aa0.19□□□□□ -2.38
SMC4-219ENST00000487747 ORM1P02763 201 aa0.19□□□□□ -2.38
SMC4-219ENST00000487747 F8A1P23610 371 aa0.19□□□□□ -2.38
SMC4-219ENST00000487747 AP1S1P61966 158 aa0.19□□□□□ -2.38
SMC4-219ENST00000487747 HLA-DRB3P79483 266 aa0.19□□□□□ -2.38
SMC4-219ENST00000487747 UMODL1-AS1Q8N2C9 162 aa0.19□□□□□ -2.38
SMC4-219ENST00000487747 TMEM86AQ8N2M4 240 aa0.19□□□□□ -2.38
SMC4-219ENST00000487747 SLC37A2Q8TED4 501 aa0.19□□□□□ -2.38
SMC4-219ENST00000487747 RAB2BQ8WUD1 216 aa0.19□□□□□ -2.38
SMC4-219ENST00000487747 CCL13Q99616 98 aa0.19□□□□□ -2.38
SMC4-219ENST00000487747 REG4Q9BYZ8 158 aa0.19□□□□□ -2.38
SMC4-219ENST00000487747 NSRP1Q9H0G5 558 aaKnown RBP0.19□□□□□ -2.38
SMC4-219ENST00000487747 XAGE1AQ9HD64 81 aa0.19□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 169.4 ms