RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 GPER1Q99527 375 aa4.07□□□□□ -1.76
COL4A3-206ENST00000487633 PDCD1LG2Q9BQ51 273 aa4.07□□□□□ -1.76
COL4A3-206ENST00000487633 SULT4A1Q9BR01 284 aa4.07□□□□□ -1.76
COL4A3-206ENST00000487633 BANF2Q9H503 90 aa4.07□□□□□ -1.76
COL4A3-206ENST00000487633 ZNF430Q9H8G1 570 aaPredicted RBP4.07□□□□□ -1.76
COL4A3-206ENST00000487633 SLC35D1Q9NTN3 355 aa4.07□□□□□ -1.76
COL4A3-206ENST00000487633 PIPOXQ9P0Z9 390 aa4.07□□□□□ -1.76
COL4A3-206ENST00000487633 ORC6Q9Y5N6 252 aa4.07□□□□□ -1.76
COL4A3-206ENST00000487633 PEX16Q9Y5Y5 336 aa4.07□□□□□ -1.76
COL4A3-206ENST00000487633 LPAP08519 4548 aa4.07□□□□□ -1.76
COL4A3-206ENST00000487633 IGHV3-21A0A0B4J1V1 117 aa4.06□□□□□ -1.76
COL4A3-206ENST00000487633 IGKV1-6A0A0C4DH72 117 aa4.06□□□□□ -1.76
COL4A3-206ENST00000487633 OR4C46A6NHA9 309 aa4.06□□□□□ -1.76
COL4A3-206ENST00000487633 MCRIP1C9JLW8 97 aa4.06□□□□□ -1.76
COL4A3-206ENST00000487633 MPPED1O15442 326 aa4.06□□□□□ -1.76
COL4A3-206ENST00000487633 APOHP02749 345 aaPredicted RBP4.06□□□□□ -1.76
COL4A3-206ENST00000487633 CD3GP09693 182 aa4.06□□□□□ -1.76
COL4A3-206ENST00000487633 BTF3P20290 206 aaKnown RBP4.06□□□□□ -1.76
COL4A3-206ENST00000487633 PTGES3Q15185 160 aaKnown RBP4.06□□□□□ -1.76
COL4A3-206ENST00000487633 MPV17LQ2QL34 196 aa4.06□□□□□ -1.76
COL4A3-206ENST00000487633 FAM209BQ5JX69 171 aa4.06□□□□□ -1.76
COL4A3-206ENST00000487633 OR4A47Q6IF82 309 aa4.06□□□□□ -1.76
COL4A3-206ENST00000487633 PDPNQ86YL7 162 aa4.06□□□□□ -1.76
COL4A3-206ENST00000487633 VKORC1L1Q8N0U8 176 aa4.06□□□□□ -1.76
COL4A3-206ENST00000487633 PARP16Q8N5Y8 322 aa4.06□□□□□ -1.76
COL4A3-206ENST00000487633 CCDC54Q8NEL0 328 aa4.06□□□□□ -1.76
COL4A3-206ENST00000487633 DNAJC9Q8WXX5 260 aa4.06□□□□□ -1.76
COL4A3-206ENST00000487633 PELI1Q96FA3 418 aa4.06□□□□□ -1.76
COL4A3-206ENST00000487633 HARBI1Q96MB7 349 aa4.06□□□□□ -1.76
COL4A3-206ENST00000487633 HDHD3Q9BSH5 251 aaPredicted RBP4.06□□□□□ -1.76
COL4A3-206ENST00000487633 METTL9Q9H1A3 318 aa4.06□□□□□ -1.76
COL4A3-206ENST00000487633 RIBC2Q9H4K1 309 aa4.06□□□□□ -1.76
COL4A3-206ENST00000487633 S100A14Q9HCY8 104 aa4.06□□□□□ -1.76
COL4A3-206ENST00000487633 SLC2A9Q9NRM0 540 aa4.06□□□□□ -1.76
COL4A3-206ENST00000487633 IL36GQ9NZH8 169 aa4.06□□□□□ -1.76
COL4A3-206ENST00000487633 ENOPH1Q9UHY7 261 aa4.06□□□□□ -1.76
COL4A3-206ENST00000487633 TBC1D24Q9ULP9 559 aa4.06□□□□□ -1.76
COL4A3-206ENST00000487633 OAZ3Q9UMX2 235 aa4.06□□□□□ -1.76
COL4A3-206ENST00000487633 IGLV11-55A0A075B6I3 123 aa4.05□□□□□ -1.76
COL4A3-206ENST00000487633 LINC00473A8K010 186 aa4.05□□□□□ -1.76
COL4A3-206ENST00000487633 FAM229AH3BQW9 127 aa4.05□□□□□ -1.76
COL4A3-206ENST00000487633 M0R1X1 148 aa4.05□□□□□ -1.76
COL4A3-206ENST00000487633 RAB27BO00194 218 aa4.05□□□□□ -1.76
COL4A3-206ENST00000487633 CHEK1O14757 476 aa4.05□□□□□ -1.76
COL4A3-206ENST00000487633 TGOLN2O43493 480 aa4.05□□□□□ -1.76
COL4A3-206ENST00000487633 SULT1C4O75897 302 aa4.05□□□□□ -1.76
COL4A3-206ENST00000487633 DAPP51397 102 aa4.05□□□□□ -1.76
COL4A3-206ENST00000487633 NXNL2Q5VZ03 156 aa4.05□□□□□ -1.76
COL4A3-206ENST00000487633 FDX2Q6P4F2 183 aa4.05□□□□□ -1.76
COL4A3-206ENST00000487633 MFSD4AQ8N468 514 aa4.05□□□□□ -1.76
COL4A3-206ENST00000487633 STX19Q8N4C7 294 aa4.05□□□□□ -1.76
COL4A3-206ENST00000487633 CBR4Q8N4T8 237 aa4.05□□□□□ -1.76
COL4A3-206ENST00000487633 ZNF502Q8TBZ5 544 aa4.05□□□□□ -1.76
COL4A3-206ENST00000487633 MARC2Q969Z3 335 aa4.05□□□□□ -1.76
COL4A3-206ENST00000487633 GALMQ96C23 342 aa4.05□□□□□ -1.76
COL4A3-206ENST00000487633 CIB1Q99828 191 aa4.05□□□□□ -1.76
COL4A3-206ENST00000487633 NICN1Q9BSH3 213 aa4.05□□□□□ -1.76
COL4A3-206ENST00000487633 C20orf24Q9BUV8 137 aa4.05□□□□□ -1.76
COL4A3-206ENST00000487633 PRRG3Q9BZD7 231 aa4.05□□□□□ -1.76
COL4A3-206ENST00000487633 KCNK15Q9H427 330 aa4.05□□□□□ -1.76
COL4A3-206ENST00000487633 Q9N2K0 584 aa4.05□□□□□ -1.76
COL4A3-206ENST00000487633 H2AFY2Q9P0M6 372 aaPredicted RBP4.05□□□□□ -1.76
COL4A3-206ENST00000487633 IGHV3-66A0A0C4DH42 116 aa4.04□□□□□ -1.76
COL4A3-206ENST00000487633 OR2T8A6NH00 312 aa4.04□□□□□ -1.76
COL4A3-206ENST00000487633 J3QRE1 110 aa4.04□□□□□ -1.76
COL4A3-206ENST00000487633 EI24O14681 340 aa4.04□□□□□ -1.76
COL4A3-206ENST00000487633 PRM2P04554 102 aa4.04□□□□□ -1.76
COL4A3-206ENST00000487633 HTR1AP08908 422 aa4.04□□□□□ -1.76
COL4A3-206ENST00000487633 OR2T7P0C7T2 308 aa4.04□□□□□ -1.76
COL4A3-206ENST00000487633 SAA1P0DJI8 122 aaPredicted RBP4.04□□□□□ -1.76
COL4A3-206ENST00000487633 GALP22466 123 aa4.04□□□□□ -1.76
COL4A3-206ENST00000487633 CEACAM6P40199 344 aa4.04□□□□□ -1.76
COL4A3-206ENST00000487633 GTF2A1P52655 376 aaPredicted RBP4.04□□□□□ -1.76
COL4A3-206ENST00000487633 RCN1Q15293 331 aa4.04□□□□□ -1.76
COL4A3-206ENST00000487633 KLK9Q2XQG4 91 aa4.04□□□□□ -1.76
COL4A3-206ENST00000487633 ZIK1Q3SY52 487 aaPredicted RBP4.04□□□□□ -1.76
COL4A3-206ENST00000487633 FAM222AQ5U5X8 452 aa4.04□□□□□ -1.76
COL4A3-206ENST00000487633 C12orf73Q69YU5 71 aa4.04□□□□□ -1.76
COL4A3-206ENST00000487633 KDM4DQ6B0I6 523 aa4.04□□□□□ -1.76
COL4A3-206ENST00000487633 XAF1Q6GPH4 301 aa4.04□□□□□ -1.76
COL4A3-206ENST00000487633 ZNF880Q6PDB4 577 aa4.04□□□□□ -1.76
COL4A3-206ENST00000487633 MORN3Q6PF18 240 aaPredicted RBP4.04□□□□□ -1.76
COL4A3-206ENST00000487633 ZNF66Q6ZN08 573 aa4.04□□□□□ -1.76
COL4A3-206ENST00000487633 PQLC1Q8N2U9 271 aa4.04□□□□□ -1.76
COL4A3-206ENST00000487633 SVOPQ8N4V2 548 aa4.04□□□□□ -1.76
COL4A3-206ENST00000487633 TMEM163Q8TC26 289 aa4.04□□□□□ -1.76
COL4A3-206ENST00000487633 EEF1AKMT3Q96AZ1 226 aa4.04□□□□□ -1.76
COL4A3-206ENST00000487633 UHRF2Q96PU4 802 aa4.04□□□□□ -1.76
COL4A3-206ENST00000487633 FAAP24Q9BTP7 215 aa4.04□□□□□ -1.76
COL4A3-206ENST00000487633 C9orf16Q9BUW7 83 aa4.04□□□□□ -1.76
COL4A3-206ENST00000487633 C6orf62Q9GZU0 229 aaPredicted RBP4.04□□□□□ -1.76
COL4A3-206ENST00000487633 GABARAPL1Q9H0R8 117 aa4.04□□□□□ -1.76
COL4A3-206ENST00000487633 RNF167Q9H6Y7 350 aa4.04□□□□□ -1.76
COL4A3-206ENST00000487633 SDHAF2Q9NX18 166 aa4.04□□□□□ -1.76
COL4A3-206ENST00000487633 IMPAD1Q9NX62 359 aa4.04□□□□□ -1.76
COL4A3-206ENST00000487633 DKK2Q9UBU2 259 aa4.04□□□□□ -1.76
COL4A3-206ENST00000487633 AASSQ9UDR5 926 aa4.04□□□□□ -1.76
COL4A3-206ENST00000487633 SMPXQ9UHP9 88 aa4.04□□□□□ -1.76
COL4A3-206ENST00000487633 KLK9Q9UKQ9 250 aa4.04□□□□□ -1.76
COL4A3-206ENST00000487633 UFC1Q9Y3C8 167 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms