RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 THRSPQ92748 146 aa11.38□□□□□ -0.59
MCF2L-228ENST00000487354 FANCD2OSQ96PS1 177 aa11.38□□□□□ -0.59
MCF2L-228ENST00000487354 SMPD3Q9NY59 655 aaPredicted RBP11.38□□□□□ -0.59
MCF2L-228ENST00000487354 KCNK7Q9Y2U2 307 aa11.38□□□□□ -0.59
MCF2L-228ENST00000487354 KLK5Q9Y337 293 aaPredicted RBP11.38□□□□□ -0.59
MCF2L-228ENST00000487354 S4R3C0 116 aa11.38□□□□□ -0.59
MCF2L-228ENST00000487354 DNAH11Q96DT5 4516 aa11.38□□□□□ -0.59
MCF2L-228ENST00000487354 TRBV6-7A0A0A0MS04 114 aa11.37□□□□□ -0.59
MCF2L-228ENST00000487354 HMX3A6NHT5 357 aa11.37□□□□□ -0.59
MCF2L-228ENST00000487354 E7EUB6 86 aa11.37□□□□□ -0.59
MCF2L-228ENST00000487354 FABP7O15540 132 aa11.37□□□□□ -0.59
MCF2L-228ENST00000487354 TAGLNQ01995 201 aaKnown RBP11.37□□□□□ -0.59
MCF2L-228ENST00000487354 PLA2G7Q13093 441 aa11.37□□□□□ -0.59
MCF2L-228ENST00000487354 P2RY14Q15391 338 aa11.37□□□□□ -0.59
MCF2L-228ENST00000487354 KLK9Q2XQG4 91 aa11.37□□□□□ -0.59
MCF2L-228ENST00000487354 UNQ9165/PRO28630Q6UXU0 137 aa11.37□□□□□ -0.59
MCF2L-228ENST00000487354 UXS1Q8NBZ7 420 aa11.37□□□□□ -0.59
MCF2L-228ENST00000487354 OR6M1Q8NGM8 313 aa11.37□□□□□ -0.59
MCF2L-228ENST00000487354 PHLDA1Q8WV24 401 aaPredicted RBP11.37□□□□□ -0.59
MCF2L-228ENST00000487354 CMSS1Q9BQ75 279 aaKnown RBP11.37□□□□□ -0.59
MCF2L-228ENST00000487354 KLK9Q9UKQ9 250 aa11.37□□□□□ -0.59
MCF2L-228ENST00000487354 BET1O15155 118 aa11.36□□□□□ -0.59
MCF2L-228ENST00000487354 S1PR2O95136 353 aa11.36□□□□□ -0.59
MCF2L-228ENST00000487354 IL6RP08887 468 aaPredicted RBP11.36□□□□□ -0.59
MCF2L-228ENST00000487354 GSTT2P0CG29 244 aa11.36□□□□□ -0.59
MCF2L-228ENST00000487354 GSTT2BP0CG30 244 aa11.36□□□□□ -0.59
MCF2L-228ENST00000487354 C8orf88P0DMB2 117 aa11.36□□□□□ -0.59
MCF2L-228ENST00000487354 RRASP10301 218 aa11.36□□□□□ -0.59
MCF2L-228ENST00000487354 ARL3P36405 182 aa11.36□□□□□ -0.59
MCF2L-228ENST00000487354 SERPINB10P48595 397 aa11.36□□□□□ -0.59
MCF2L-228ENST00000487354 MED21Q13503 144 aa11.36□□□□□ -0.59
MCF2L-228ENST00000487354 CDK10Q15131 360 aa11.36□□□□□ -0.59
MCF2L-228ENST00000487354 FAM209BQ5JX69 171 aa11.36□□□□□ -0.59
MCF2L-228ENST00000487354 TTC23Q5W5X9 447 aa11.36□□□□□ -0.59
MCF2L-228ENST00000487354 PQLC1Q8N2U9 271 aa11.36□□□□□ -0.59
MCF2L-228ENST00000487354 NANOGP1Q8N7R0 232 aa11.36□□□□□ -0.59
MCF2L-228ENST00000487354 ZNF555Q8NEP9 628 aa11.36□□□□□ -0.59
MCF2L-228ENST00000487354 RNF183Q96D59 192 aa11.36□□□□□ -0.59
MCF2L-228ENST00000487354 SPIN2AQ99865 258 aa11.36□□□□□ -0.59
MCF2L-228ENST00000487354 SPIN2BQ9BPZ2 258 aa11.36□□□□□ -0.59
MCF2L-228ENST00000487354 FBXL7Q9UJT9 491 aa11.36□□□□□ -0.59
MCF2L-228ENST00000487354 ZNF257Q9Y2Q1 563 aa11.36□□□□□ -0.59
MCF2L-228ENST00000487354 FCGR3AP08637 254 aa11.35□□□□□ -0.59
MCF2L-228ENST00000487354 UCHL1P09936 223 aa11.35□□□□□ -0.59
MCF2L-228ENST00000487354 CBX3Q13185 183 aa11.35□□□□□ -0.59
MCF2L-228ENST00000487354 CLEC19AQ6UXS0 136 aa11.35□□□□□ -0.59
MCF2L-228ENST00000487354 OSR1Q8TAX0 266 aaPredicted RBP11.35□□□□□ -0.59
MCF2L-228ENST00000487354 URM1Q9BTM9 101 aaKnown RBP11.35□□□□□ -0.59
MCF2L-228ENST00000487354 S100A14Q9HCY8 104 aa11.35□□□□□ -0.59
MCF2L-228ENST00000487354 PSORS1C1Q9UIG5 152 aa11.35□□□□□ -0.59
MCF2L-228ENST00000487354 MUC4Q99102 2169 aa11.35□□□□□ -0.59
MCF2L-228ENST00000487354 PKD1P98161 4303 aa11.35□□□□□ -0.59
MCF2L-228ENST00000487354 NPIPB5A8MRT5 1133 aa11.34□□□□□ -0.59
MCF2L-228ENST00000487354 SLC17A2O00624 439 aa11.34□□□□□ -0.59
MCF2L-228ENST00000487354 MYL12BO14950 172 aa11.34□□□□□ -0.59
MCF2L-228ENST00000487354 DIRAS3O95661 229 aa11.34□□□□□ -0.59
MCF2L-228ENST00000487354 ODF3L2Q3SX64 289 aa11.34□□□□□ -0.59
MCF2L-228ENST00000487354 MMD2Q8IY49 270 aa11.34□□□□□ -0.59
MCF2L-228ENST00000487354 MAFIPQ8WZ33 124 aa11.34□□□□□ -0.59
MCF2L-228ENST00000487354 FKBP14Q9NWM8 211 aa11.34□□□□□ -0.59
MCF2L-228ENST00000487354 UBQLN2Q9UHD9 624 aa11.34□□□□□ -0.59
MCF2L-228ENST00000487354 TRAV25A0A0B4J276 109 aa11.33□□□□□ -0.6
MCF2L-228ENST00000487354 MFSD2BA6NFX1 497 aa11.33□□□□□ -0.6
MCF2L-228ENST00000487354 CRYGCP07315 174 aa11.33□□□□□ -0.6
MCF2L-228ENST00000487354 ZNF735P0CB33 412 aa11.33□□□□□ -0.6
MCF2L-228ENST00000487354 AREGP15514 252 aa11.33□□□□□ -0.6
MCF2L-228ENST00000487354 APOC4P55056 127 aa11.33□□□□□ -0.6
MCF2L-228ENST00000487354 CLDN12P56749 244 aa11.33□□□□□ -0.6
MCF2L-228ENST00000487354 ANKRD55Q3KP44 614 aa11.33□□□□□ -0.6
MCF2L-228ENST00000487354 HSD17B12Q53GQ0 312 aa11.33□□□□□ -0.6
MCF2L-228ENST00000487354 AHSA2Q719I0 299 aa11.33□□□□□ -0.6
MCF2L-228ENST00000487354 H1FOOQ8IZA3 346 aaPredicted RBP11.33□□□□□ -0.6
MCF2L-228ENST00000487354 VKORC1L1Q8N0U8 176 aa11.33□□□□□ -0.6
MCF2L-228ENST00000487354 OR1L6Q8NGR2 347 aa11.33□□□□□ -0.6
MCF2L-228ENST00000487354 OR10J5Q8NHC4 309 aa11.33□□□□□ -0.6
MCF2L-228ENST00000487354 FBLIM1Q8WUP2 373 aa11.33□□□□□ -0.6
MCF2L-228ENST00000487354 ADTRPQ96IZ2 230 aa11.33□□□□□ -0.6
MCF2L-228ENST00000487354 LSM2Q9Y333 95 aaKnown RBP11.33□□□□□ -0.6
MCF2L-228ENST00000487354 IGKV1D-8A0A087WSZ0 117 aa11.32□□□□□ -0.6
MCF2L-228ENST00000487354 ZNF320A2RRD8 509 aa11.32□□□□□ -0.6
MCF2L-228ENST00000487354 CGB1A6NKQ9 187 aa11.32□□□□□ -0.6
MCF2L-228ENST00000487354 UBE2CO00762 179 aa11.32□□□□□ -0.6
MCF2L-228ENST00000487354 IGLV2-14P01704 120 aa11.32□□□□□ -0.6
MCF2L-228ENST00000487354 CDK1P06493 297 aa11.32□□□□□ -0.6
MCF2L-228ENST00000487354 GNAO1P09471 354 aa11.32□□□□□ -0.6
MCF2L-228ENST00000487354 FCGR2BP31994 310 aaPredicted RBP11.32□□□□□ -0.6
MCF2L-228ENST00000487354 RPL30P62888 115 aaKnown RBP11.32□□□□□ -0.6
MCF2L-228ENST00000487354 SLC25A42Q86VD7 318 aa11.32□□□□□ -0.6
MCF2L-228ENST00000487354 MS4A15Q8N5U1 240 aa11.32□□□□□ -0.6
MCF2L-228ENST00000487354 OR2C3Q8N628 320 aa11.32□□□□□ -0.6
MCF2L-228ENST00000487354 FYTTD1Q96QD9 318 aaKnown RBP11.32□□□□□ -0.6
MCF2L-228ENST00000487354 IGLV11-55A0A075B6I3 123 aa11.31□□□□□ -0.6
MCF2L-228ENST00000487354 KIR2DL5BA0A0G2JN68 375 aa11.31□□□□□ -0.6
MCF2L-228ENST00000487354 KIR2DL5BA0A0G2JPC4 375 aa11.31□□□□□ -0.6
MCF2L-228ENST00000487354 A0A1B0GVY2 172 aa11.31□□□□□ -0.6
MCF2L-228ENST00000487354 CTRB1P17538 263 aa11.31□□□□□ -0.6
MCF2L-228ENST00000487354 BRWD1-AS2P59051 145 aa11.31□□□□□ -0.6
MCF2L-228ENST00000487354 TPBGQ13641 420 aa11.31□□□□□ -0.6
MCF2L-228ENST00000487354 FAM106AQ4KMX7 169 aa11.31□□□□□ -0.6
MCF2L-228ENST00000487354 CTRB2Q6GPI1 263 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms