RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 OR52E5Q8NH55 327 aa21.63■■□□□ 1.05
HLA-C-208ENST00000487245 FAM222BQ8WU58 562 aa21.63■■□□□ 1.05
HLA-C-208ENST00000487245 IGHV3OR15-7A0A075B7D8 119 aa21.62■■□□□ 1.05
HLA-C-208ENST00000487245 SPNS3Q6ZMD2 512 aa21.62■■□□□ 1.05
HLA-C-208ENST00000487245 RNF7Q9UBF6 113 aa21.62■■□□□ 1.05
HLA-C-208ENST00000487245 GAB2Q9UQC2 676 aa21.62■■□□□ 1.05
HLA-C-208ENST00000487245 WDR83OSQ9Y284 106 aa21.62■■□□□ 1.05
HLA-C-208ENST00000487245 K7EM74 188 aa21.62■■□□□ 1.05
HLA-C-208ENST00000487245 ACOT6Q3I5F7 207 aaPredicted RBP21.62■■□□□ 1.05
HLA-C-208ENST00000487245 ABHD5Q8WTS1 349 aa21.62■■□□□ 1.05
HLA-C-208ENST00000487245 RAB24Q969Q5 203 aa21.62■■□□□ 1.05
HLA-C-208ENST00000487245 QTRT1Q9BXR0 403 aaKnown RBP21.62■■□□□ 1.05
HLA-C-208ENST00000487245 IL19Q9UHD0 177 aa21.62■■□□□ 1.05
HLA-C-208ENST00000487245 SMCO3A2RU48 225 aa21.61■■□□□ 1.05
HLA-C-208ENST00000487245 PROP1O75360 226 aa21.61■■□□□ 1.05
HLA-C-208ENST00000487245 OR9G9P0C7N8 305 aa21.61■■□□□ 1.05
HLA-C-208ENST00000487245 TNFSF4P23510 183 aa21.61■■□□□ 1.05
HLA-C-208ENST00000487245 KIR2DS2P43631 304 aa21.61■■□□□ 1.05
HLA-C-208ENST00000487245 LTC4SQ16873 150 aa21.61■■□□□ 1.05
HLA-C-208ENST00000487245 BSXQ3C1V8 233 aa21.61■■□□□ 1.05
HLA-C-208ENST00000487245 Q8N7P7 452 aa21.61■■□□□ 1.05
HLA-C-208ENST00000487245 FRZBQ92765 325 aa21.61■■□□□ 1.05
HLA-C-208ENST00000487245 SSX3Q99909 188 aa21.61■■□□□ 1.05
HLA-C-208ENST00000487245 USF3Q68DE3 2245 aa21.61■■□□□ 1.05
HLA-C-208ENST00000487245 RBMXL2O75526 392 aaKnown RBP21.6■■□□□ 1.05
HLA-C-208ENST00000487245 IGHV2-70P01814 119 aa21.6■■□□□ 1.05
HLA-C-208ENST00000487245 PFN1P07737 140 aaKnown RBP21.6■■□□□ 1.05
HLA-C-208ENST00000487245 TRGC1P0CF51 173 aa21.6■■□□□ 1.05
HLA-C-208ENST00000487245 SPCS3P61009 180 aa21.6■■□□□ 1.05
HLA-C-208ENST00000487245 RPL23P62829 140 aaKnown RBP21.6■■□□□ 1.05
HLA-C-208ENST00000487245 RPP30P78346 268 aaKnown RBP21.6■■□□□ 1.05
HLA-C-208ENST00000487245 HIST3H2BBQ8N257 126 aa21.6■■□□□ 1.05
HLA-C-208ENST00000487245 PPP1R2P9O14990 202 aa21.6■■□□□ 1.05
HLA-C-208ENST00000487245 RAB7AP51149 207 aa21.6■■□□□ 1.05
HLA-C-208ENST00000487245 LOXL3P58215 753 aa21.6■■□□□ 1.05
HLA-C-208ENST00000487245 ADIRFQ15847 76 aa21.6■■□□□ 1.05
HLA-C-208ENST00000487245 SPRNQ5BIV9 151 aa21.6■■□□□ 1.05
HLA-C-208ENST00000487245 DNLZQ5SXM8 178 aa21.6■■□□□ 1.05
HLA-C-208ENST00000487245 RAB1CQ92928 201 aa21.6■■□□□ 1.05
HLA-C-208ENST00000487245 SRD5A3Q9H8P0 318 aa21.6■■□□□ 1.05
HLA-C-208ENST00000487245 CALYQ9NYX4 217 aa21.6■■□□□ 1.05
HLA-C-208ENST00000487245 CELSR3Q9NYQ7 3312 aa21.6■■□□□ 1.05
HLA-C-208ENST00000487245 MPDU1O75352 247 aa21.59■■□□□ 1.05
HLA-C-208ENST00000487245 CGB3P0DN86 165 aa21.59■■□□□ 1.05
HLA-C-208ENST00000487245 CGB7P0DN87 165 aa21.59■■□□□ 1.05
HLA-C-208ENST00000487245 CD40P25942 277 aa21.59■■□□□ 1.05
HLA-C-208ENST00000487245 EDDM3BP56851 147 aa21.59■■□□□ 1.05
HLA-C-208ENST00000487245 TNFAIP6P98066 277 aaPredicted RBP21.59■■□□□ 1.05
HLA-C-208ENST00000487245 C16orf82Q7Z2V1 217 aa21.59■■□□□ 1.05
HLA-C-208ENST00000487245 TGIF2LYQ8IUE0 185 aa21.59■■□□□ 1.05
HLA-C-208ENST00000487245 ZNRF1Q8ND25 227 aa21.59■■□□□ 1.05
HLA-C-208ENST00000487245 SDSLQ96GA7 329 aa21.59■■□□□ 1.05
HLA-C-208ENST00000487245 PARLQ9H300 379 aa21.59■■□□□ 1.05
HLA-C-208ENST00000487245 CACNA1DQ01668 2161 aa21.59■■□□□ 1.05
HLA-C-208ENST00000487245 CNOT1A5YKK6 2376 aaKnown RBP21.59■■□□□ 1.05
HLA-C-208ENST00000487245 FAM27E3Q08E93 113 aa21.58■■□□□ 1.05
HLA-C-208ENST00000487245 NUP37Q8NFH4 326 aa21.58■■□□□ 1.05
HLA-C-208ENST00000487245 NEIL1Q96FI4 390 aaPredicted RBP21.58■■□□□ 1.05
HLA-C-208ENST00000487245 M0R1X1 148 aa21.58■■□□□ 1.04
HLA-C-208ENST00000487245 FCGR3BO75015 233 aa21.58■■□□□ 1.04
HLA-C-208ENST00000487245 VENTXO95231 258 aa21.58■■□□□ 1.04
HLA-C-208ENST00000487245 LINC00205P59089 165 aa21.58■■□□□ 1.04
HLA-C-208ENST00000487245 OR10A7Q8NGE5 316 aa21.58■■□□□ 1.04
HLA-C-208ENST00000487245 ELOVL5Q9NYP7 299 aa21.58■■□□□ 1.04
HLA-C-208ENST00000487245 DMRT1Q9Y5R6 373 aa21.58■■□□□ 1.04
HLA-C-208ENST00000487245 PRRG2O14669 202 aa21.57■■□□□ 1.04
HLA-C-208ENST00000487245 CD1BP29016 333 aa21.57■■□□□ 1.04
HLA-C-208ENST00000487245 CDC34P49427 236 aaPredicted RBP21.57■■□□□ 1.04
HLA-C-208ENST00000487245 TMPRSS3P57727 454 aa21.57■■□□□ 1.04
HLA-C-208ENST00000487245 OR4F5Q8NH21 305 aa21.57■■□□□ 1.04
HLA-C-208ENST00000487245 Q8TCH9 128 aa21.57■■□□□ 1.04
HLA-C-208ENST00000487245 RPUSD4Q96CM3 377 aaKnown RBP21.57■■□□□ 1.04
HLA-C-208ENST00000487245 ANAPC16Q96DE5 110 aa21.57■■□□□ 1.04
HLA-C-208ENST00000487245 OR4F4Q96R69 305 aa21.57■■□□□ 1.04
HLA-C-208ENST00000487245 HMGB3O15347 200 aaKnown RBP21.56■■□□□ 1.04
HLA-C-208ENST00000487245 IGHV1-46P01743 117 aa21.56■■□□□ 1.04
HLA-C-208ENST00000487245 VDAC2P45880 294 aaPredicted RBP21.56■■□□□ 1.04
HLA-C-208ENST00000487245 ERVK-16P61578 105 aa21.56■■□□□ 1.04
HLA-C-208ENST00000487245 PYY3Q5JQD4 70 aa21.56■■□□□ 1.04
HLA-C-208ENST00000487245 ZNF436-AS1Q8NC38 126 aaPredicted RBP21.56■■□□□ 1.04
HLA-C-208ENST00000487245 FAM234AQ9H0X4 552 aa21.56■■□□□ 1.04
HLA-C-208ENST00000487245 GCM1Q9NP62 436 aa21.56■■□□□ 1.04
HLA-C-208ENST00000487245 SOD3P08294 240 aa21.56■■□□□ 1.04
HLA-C-208ENST00000487245 BMP5P22003 454 aa21.56■■□□□ 1.04
HLA-C-208ENST00000487245 PRAMEF5Q5TYX0 476 aa21.56■■□□□ 1.04
HLA-C-208ENST00000487245 S1PR3Q99500 378 aa21.56■■□□□ 1.04
HLA-C-208ENST00000487245 IFI27L2Q9H2X8 130 aa21.56■■□□□ 1.04
HLA-C-208ENST00000487245 SVILO95425 2214 aa21.55■■□□□ 1.04
HLA-C-208ENST00000487245 HNF4GQ14541 408 aa21.55■■□□□ 1.04
HLA-C-208ENST00000487245 TMEM30BQ3MIR4 351 aa21.55■■□□□ 1.04
HLA-C-208ENST00000487245 SPINK9Q5DT21 86 aa21.55■■□□□ 1.04
HLA-C-208ENST00000487245 STUMQ69YW2 141 aa21.55■■□□□ 1.04
HLA-C-208ENST00000487245 TMEM108Q6UXF1 575 aa21.55■■□□□ 1.04
HLA-C-208ENST00000487245 SSX8Q7RTT4 187 aa21.55■■□□□ 1.04
HLA-C-208ENST00000487245 OR51G1Q8NGK1 321 aa21.55■■□□□ 1.04
HLA-C-208ENST00000487245 OR4A16Q8NH70 328 aa21.55■■□□□ 1.04
HLA-C-208ENST00000487245 GATAD1Q8WUU5 269 aa21.55■■□□□ 1.04
HLA-C-208ENST00000487245 GFOD1Q9NXC2 390 aa21.55■■□□□ 1.04
HLA-C-208ENST00000487245 KBTBD11-OT1A0A1B0GTJ5 212 aa21.54■■□□□ 1.04
HLA-C-208ENST00000487245 H7BYZ3 331 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms