RNA–Protein interactions for RNA: ENST00000487010.1

COL3A1-206, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 2,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-206ENST00000487010 PSG11Q9UQ72 335 aa10.16□□□□□ -0.78
COL3A1-206ENST00000487010 ZNF891A8MT65 544 aaPredicted RBP10.15□□□□□ -0.78
COL3A1-206ENST00000487010 CXorf1O96002 111 aa10.15□□□□□ -0.78
COL3A1-206ENST00000487010 TFF1P04155 84 aa10.15□□□□□ -0.78
COL3A1-206ENST00000487010 STAG3L2P0CL84 134 aa10.15□□□□□ -0.78
COL3A1-206ENST00000487010 STAG3L3P0CL85 134 aa10.15□□□□□ -0.78
COL3A1-206ENST00000487010 SSTR5P35346 364 aa10.15□□□□□ -0.78
COL3A1-206ENST00000487010 TIMP3P35625 211 aa10.15□□□□□ -0.78
COL3A1-206ENST00000487010 SELENOTP62341 195 aa10.15□□□□□ -0.78
COL3A1-206ENST00000487010 RPP30P78346 268 aaKnown RBP10.15□□□□□ -0.78
COL3A1-206ENST00000487010 FOXF2Q12947 444 aa10.15□□□□□ -0.78
COL3A1-206ENST00000487010 ACP7Q6ZNF0 438 aa10.15□□□□□ -0.78
COL3A1-206ENST00000487010 TMEM105Q8N8V8 129 aa10.15□□□□□ -0.78
COL3A1-206ENST00000487010 OR10G8Q8NGN5 311 aa10.15□□□□□ -0.78
COL3A1-206ENST00000487010 OCC1Q8TAD7 63 aa10.15□□□□□ -0.78
COL3A1-206ENST00000487010 CMTM2Q8TAZ6 248 aa10.15□□□□□ -0.78
COL3A1-206ENST00000487010 PRR7Q8TB68 274 aa10.15□□□□□ -0.78
COL3A1-206ENST00000487010 TBX15Q96SF7 602 aa10.15□□□□□ -0.78
COL3A1-206ENST00000487010 OBP2BQ9NPH6 170 aa10.15□□□□□ -0.78
COL3A1-206ENST00000487010 FREM2Q5SZK8 3169 aa10.15□□□□□ -0.79
COL3A1-206ENST00000487010 SCO2A0A1W2PP80 73 aa10.14□□□□□ -0.79
COL3A1-206ENST00000487010 ZNF705FA8MVS1 300 aaPredicted RBP10.14□□□□□ -0.79
COL3A1-206ENST00000487010 DEFB108AA8MXU0 73 aa10.14□□□□□ -0.79
COL3A1-206ENST00000487010 ZNF705DP0CH99 300 aaPredicted RBP10.14□□□□□ -0.79
COL3A1-206ENST00000487010 ZNF705BP0CI00 300 aaPredicted RBP10.14□□□□□ -0.79
COL3A1-206ENST00000487010 ACP1P24666 158 aa10.14□□□□□ -0.79
COL3A1-206ENST00000487010 MPV17P39210 176 aa10.14□□□□□ -0.79
COL3A1-206ENST00000487010 TDGF1P3P51864 188 aa10.14□□□□□ -0.79
COL3A1-206ENST00000487010 PDLIM3Q53GG5 364 aaPredicted RBP10.14□□□□□ -0.79
COL3A1-206ENST00000487010 OR13A1Q8NGR1 328 aa10.14□□□□□ -0.79
COL3A1-206ENST00000487010 RFESDQ8TAC1 157 aa10.14□□□□□ -0.79
COL3A1-206ENST00000487010 SDSLQ96GA7 329 aa10.14□□□□□ -0.79
COL3A1-206ENST00000487010 MGST2Q99735 147 aa10.14□□□□□ -0.79
COL3A1-206ENST00000487010 ZDHHC11Q9H8X9 412 aa10.14□□□□□ -0.79
COL3A1-206ENST00000487010 GRIFINA4D1Z8 144 aa10.14□□□□□ -0.79
COL3A1-206ENST00000487010 FAM90A9PA6NNJ1 464 aa10.14□□□□□ -0.79
COL3A1-206ENST00000487010 RRHO14718 337 aa10.14□□□□□ -0.79
COL3A1-206ENST00000487010 YPEL1O60688 119 aa10.14□□□□□ -0.79
COL3A1-206ENST00000487010 SP1P08047 785 aa10.14□□□□□ -0.79
COL3A1-206ENST00000487010 TMPRSS3P57727 454 aa10.14□□□□□ -0.79
COL3A1-206ENST00000487010 PAFAH1B2P68402 229 aa10.14□□□□□ -0.79
COL3A1-206ENST00000487010 ZNF718Q3SXZ3 478 aa10.14□□□□□ -0.79
COL3A1-206ENST00000487010 UBALD2Q8IYN6 164 aa10.14□□□□□ -0.79
COL3A1-206ENST00000487010 TPRX1Q8N7U7 411 aa10.14□□□□□ -0.79
COL3A1-206ENST00000487010 KLF14Q8TD94 323 aaPredicted RBP10.14□□□□□ -0.79
COL3A1-206ENST00000487010 YPEL2Q96QA6 119 aa10.14□□□□□ -0.79
COL3A1-206ENST00000487010 TMEM204Q9BSN7 226 aa10.14□□□□□ -0.79
COL3A1-206ENST00000487010 GGTLC1Q9BX51 225 aa10.14□□□□□ -0.79
COL3A1-206ENST00000487010 MS4A5Q9H3V2 200 aa10.14□□□□□ -0.79
COL3A1-206ENST00000487010 TMEM106BQ9NUM4 274 aa10.14□□□□□ -0.79
COL3A1-206ENST00000487010 METRNQ9UJH8 293 aa10.14□□□□□ -0.79
COL3A1-206ENST00000487010 TP53TG3Q9ULZ0 132 aa10.14□□□□□ -0.79
COL3A1-206ENST00000487010 TRAV9-1A0A075B6T8 112 aa10.13□□□□□ -0.79
COL3A1-206ENST00000487010 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.13□□□□□ -0.79
COL3A1-206ENST00000487010 C9orf172C9J069 976 aa10.13□□□□□ -0.79
COL3A1-206ENST00000487010 PRSS46E5RG02 174 aa10.13□□□□□ -0.79
COL3A1-206ENST00000487010 TNFSF15O95150 251 aa10.13□□□□□ -0.79
COL3A1-206ENST00000487010 HPRT1P00492 218 aa10.13□□□□□ -0.79
COL3A1-206ENST00000487010 HNF1AP20823 631 aa10.13□□□□□ -0.79
COL3A1-206ENST00000487010 DUTP33316 252 aaKnown RBP10.13□□□□□ -0.79
COL3A1-206ENST00000487010 VDAC2P45880 294 aaPredicted RBP10.13□□□□□ -0.79
COL3A1-206ENST00000487010 TPPP2P59282 170 aa10.13□□□□□ -0.79
COL3A1-206ENST00000487010 DCAF10Q5QP82 559 aa10.13□□□□□ -0.79
COL3A1-206ENST00000487010 MIC13Q5XKP0 118 aa10.13□□□□□ -0.79
COL3A1-206ENST00000487010 OR52E5Q8NH55 327 aa10.13□□□□□ -0.79
COL3A1-206ENST00000487010 CXXC4Q9H2H0 198 aa10.13□□□□□ -0.79
COL3A1-206ENST00000487010 IL36BQ9NZH7 164 aa10.13□□□□□ -0.79
COL3A1-206ENST00000487010 CACNA1DQ01668 2161 aa10.13□□□□□ -0.79
COL3A1-206ENST00000487010 C15orf65H3BRN8 121 aa10.13□□□□□ -0.79
COL3A1-206ENST00000487010 FCGR3BO75015 233 aa10.13□□□□□ -0.79
COL3A1-206ENST00000487010 PROP1O75360 226 aa10.13□□□□□ -0.79
COL3A1-206ENST00000487010 ESDP10768 282 aa10.13□□□□□ -0.79
COL3A1-206ENST00000487010 IGHV1-2P23083 117 aa10.13□□□□□ -0.79
COL3A1-206ENST00000487010 CBLN1P23435 193 aa10.13□□□□□ -0.79
COL3A1-206ENST00000487010 G0S2P27469 103 aa10.13□□□□□ -0.79
COL3A1-206ENST00000487010 THBS3P49746 956 aa10.13□□□□□ -0.79
COL3A1-206ENST00000487010 LINC00310P59036 64 aa10.13□□□□□ -0.79
COL3A1-206ENST00000487010 HTD2P86397 168 aa10.13□□□□□ -0.79
COL3A1-206ENST00000487010 ZNF90Q03938 601 aa10.13□□□□□ -0.79
COL3A1-206ENST00000487010 PRAMEF5Q5TYX0 476 aa10.13□□□□□ -0.79
COL3A1-206ENST00000487010 PRAMEF6Q5VXH4 476 aa10.13□□□□□ -0.79
COL3A1-206ENST00000487010 Q6ZWC4 215 aa10.13□□□□□ -0.79
COL3A1-206ENST00000487010 OR4A16Q8NH70 328 aa10.13□□□□□ -0.79
COL3A1-206ENST00000487010 DEFB127Q9H1M4 99 aa10.13□□□□□ -0.79
COL3A1-206ENST00000487010 HEYLQ9NQ87 328 aaPredicted RBP10.13□□□□□ -0.79
COL3A1-206ENST00000487010 KLF13Q9Y2Y9 288 aaPredicted RBP10.13□□□□□ -0.79
COL3A1-206ENST00000487010 YTHDF2Q9Y5A9 579 aaKnown RBP10.13□□□□□ -0.79
COL3A1-206ENST00000487010 HCFC1P51610 2035 aa10.12□□□□□ -0.79
COL3A1-206ENST00000487010 KLRC4-KLRK1H3BQV0 150 aa10.12□□□□□ -0.79
COL3A1-206ENST00000487010 M0QZK8 103 aa10.12□□□□□ -0.79
COL3A1-206ENST00000487010 AQP7O14520 342 aa10.12□□□□□ -0.79
COL3A1-206ENST00000487010 SPINT2O43291 252 aa10.12□□□□□ -0.79
COL3A1-206ENST00000487010 ADH4P08319 380 aa10.12□□□□□ -0.79
COL3A1-206ENST00000487010 GPR12P47775 334 aa10.12□□□□□ -0.79
COL3A1-206ENST00000487010 CASP6P55212 293 aa10.12□□□□□ -0.79
COL3A1-206ENST00000487010 WDR82Q6UXN9 313 aa10.12□□□□□ -0.79
COL3A1-206ENST00000487010 TMPRSS7Q7RTY8 843 aa10.12□□□□□ -0.79
COL3A1-206ENST00000487010 MRPL52Q86TS9 123 aaKnown RBP10.12□□□□□ -0.79
COL3A1-206ENST00000487010 GMPPAQ96IJ6 420 aaPredicted RBP10.12□□□□□ -0.79
COL3A1-206ENST00000487010 FOXJ2Q9P0K8 574 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms