RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 ZNF497Q6ZNH5 498 aa11.11□□□□□ -0.63
HMGN1-216ENST00000486741 KIAA1324LA8MWY0 1029 aaPredicted RBP11.11□□□□□ -0.63
HMGN1-216ENST00000486741 C10orf142B7Z368 130 aa11.11□□□□□ -0.63
HMGN1-216ENST00000486741 EGR1P18146 543 aa11.11□□□□□ -0.63
HMGN1-216ENST00000486741 COLCA1Q6ZS62 124 aa11.11□□□□□ -0.63
HMGN1-216ENST00000486741 MARVELD3Q96A59 401 aa11.11□□□□□ -0.63
HMGN1-216ENST00000486741 TMEM56Q96MV1 263 aa11.11□□□□□ -0.63
HMGN1-216ENST00000486741 CLCF1Q9UBD9 225 aa11.11□□□□□ -0.63
HMGN1-216ENST00000486741 ATXN7O15265 892 aaPredicted RBP11.11□□□□□ -0.63
HMGN1-216ENST00000486741 MLNRO43193 412 aa11.11□□□□□ -0.63
HMGN1-216ENST00000486741 MIC13Q5XKP0 118 aa11.11□□□□□ -0.63
HMGN1-216ENST00000486741 ZNF66Q6ZN08 573 aa11.11□□□□□ -0.63
HMGN1-216ENST00000486741 C15orf54Q8N8G6 183 aa11.11□□□□□ -0.63
HMGN1-216ENST00000486741 ZNF714Q96N38 554 aa11.11□□□□□ -0.63
HMGN1-216ENST00000486741 FAM117AQ9C073 453 aa11.11□□□□□ -0.63
HMGN1-216ENST00000486741 OR51B2Q9Y5P1 312 aa11.11□□□□□ -0.63
HMGN1-216ENST00000486741 TMEM56-RWDD3S4R434 201 aa11.11□□□□□ -0.63
HMGN1-216ENST00000486741 RBP4P02753 201 aa11.1□□□□□ -0.63
HMGN1-216ENST00000486741 RTP5Q14D33 572 aa11.1□□□□□ -0.63
HMGN1-216ENST00000486741 C1orf162Q8NEQ5 155 aaPredicted RBP11.1□□□□□ -0.63
HMGN1-216ENST00000486741 BLNKQ8WV28 456 aa11.1□□□□□ -0.63
HMGN1-216ENST00000486741 ADTRPQ96IZ2 230 aa11.1□□□□□ -0.63
HMGN1-216ENST00000486741 DMRTA2Q96SC8 542 aa11.1□□□□□ -0.63
HMGN1-216ENST00000486741 VAX2Q9UIW0 290 aa11.1□□□□□ -0.63
HMGN1-216ENST00000486741 IGKV1-6A0A0C4DH72 117 aa11.1□□□□□ -0.63
HMGN1-216ENST00000486741 CHRNB4P30926 498 aa11.1□□□□□ -0.63
HMGN1-216ENST00000486741 THBS3P49746 956 aa11.1□□□□□ -0.63
HMGN1-216ENST00000486741 TAS2R45P59539 299 aa11.1□□□□□ -0.63
HMGN1-216ENST00000486741 TIGITQ495A1 244 aa11.1□□□□□ -0.63
HMGN1-216ENST00000486741 SLC35E3Q7Z769 313 aa11.1□□□□□ -0.63
HMGN1-216ENST00000486741 FAM57AQ8TBR7 257 aa11.1□□□□□ -0.63
HMGN1-216ENST00000486741 ZNF835Q9Y2P0 537 aa11.1□□□□□ -0.63
HMGN1-216ENST00000486741 INSIG2Q9Y5U4 225 aa11.1□□□□□ -0.63
HMGN1-216ENST00000486741 DOPEY2Q9Y3R5 2298 aa11.1□□□□□ -0.63
HMGN1-216ENST00000486741 LYNX1G3V0Z9 82 aa11.1□□□□□ -0.63
HMGN1-216ENST00000486741 OR10J4P0C629 311 aa11.1□□□□□ -0.63
HMGN1-216ENST00000486741 LYNX1P0DP58 116 aa11.1□□□□□ -0.63
HMGN1-216ENST00000486741 BSXQ3C1V8 233 aa11.1□□□□□ -0.63
HMGN1-216ENST00000486741 FAM210BQ96KR6 192 aa11.1□□□□□ -0.63
HMGN1-216ENST00000486741 CMTM2Q8TAZ6 248 aa11.09□□□□□ -0.63
HMGN1-216ENST00000486741 FAM216AQ8WUB2 273 aa11.09□□□□□ -0.63
HMGN1-216ENST00000486741 NEIL1Q96FI4 390 aaPredicted RBP11.09□□□□□ -0.63
HMGN1-216ENST00000486741 DNAH14Q0VDD8 3507 aa11.09□□□□□ -0.63
HMGN1-216ENST00000486741 BCL2P10415 239 aa11.09□□□□□ -0.63
HMGN1-216ENST00000486741 CCL3L1P16619 93 aa11.09□□□□□ -0.63
HMGN1-216ENST00000486741 CCL20P78556 96 aa11.09□□□□□ -0.63
HMGN1-216ENST00000486741 PSG5Q15238 335 aa11.09□□□□□ -0.63
HMGN1-216ENST00000486741 HCP5Q6MZN7 132 aa11.09□□□□□ -0.63
HMGN1-216ENST00000486741 IL22RA2Q969J5 263 aa11.09□□□□□ -0.63
HMGN1-216ENST00000486741 LSM10Q969L4 123 aaKnown RBP11.09□□□□□ -0.63
HMGN1-216ENST00000486741 ASCL3Q9NQ33 180 aa11.09□□□□□ -0.63
HMGN1-216ENST00000486741 GSN-AS1Q9NRJ2 163 aa11.09□□□□□ -0.63
HMGN1-216ENST00000486741 RAB5AP20339 215 aa11.09□□□□□ -0.63
HMGN1-216ENST00000486741 PAX6P26367 422 aa11.09□□□□□ -0.63
HMGN1-216ENST00000486741 ERVFC1-1P60608 527 aa11.09□□□□□ -0.63
HMGN1-216ENST00000486741 MRGPRGQ86SM5 289 aa11.09□□□□□ -0.63
HMGN1-216ENST00000486741 BAGE3Q86Y29 109 aa11.09□□□□□ -0.63
HMGN1-216ENST00000486741 BAGE2Q86Y30 109 aa11.09□□□□□ -0.63
HMGN1-216ENST00000486741 SLC24A4Q8NFF2 622 aa11.09□□□□□ -0.63
HMGN1-216ENST00000486741 RAB24Q969Q5 203 aa11.09□□□□□ -0.63
HMGN1-216ENST00000486741 REG4Q9BYZ8 158 aa11.09□□□□□ -0.63
HMGN1-216ENST00000486741 OR51M1Q9H341 326 aa11.09□□□□□ -0.63
HMGN1-216ENST00000486741 GNB4Q9HAV0 340 aa11.09□□□□□ -0.63
HMGN1-216ENST00000486741 ZDHHC8Q9ULC8 765 aa11.09□□□□□ -0.63
HMGN1-216ENST00000486741 A0A0G2JRQ6 117 aa11.09□□□□□ -0.63
HMGN1-216ENST00000486741 CT45A6P0DMU7 189 aa11.09□□□□□ -0.63
HMGN1-216ENST00000486741 CT45A5P0DMU8 189 aa11.09□□□□□ -0.63
HMGN1-216ENST00000486741 CT45A7P0DMV0 189 aa11.09□□□□□ -0.63
HMGN1-216ENST00000486741 KIR2DS2P43631 304 aa11.09□□□□□ -0.63
HMGN1-216ENST00000486741 UBE2G1P62253 170 aa11.09□□□□□ -0.63
HMGN1-216ENST00000486741 CT45A1Q5HYN5 189 aa11.09□□□□□ -0.63
HMGN1-216ENST00000486741 CT45A3Q8NHU0 189 aa11.09□□□□□ -0.63
HMGN1-216ENST00000486741 GINS3Q9BRX5 216 aa11.09□□□□□ -0.63
HMGN1-216ENST00000486741 PLSCR4Q9NRQ2 329 aa11.09□□□□□ -0.63
HMGN1-216ENST00000486741 HILPDAQ9Y5L2 63 aa11.09□□□□□ -0.63
HMGN1-216ENST00000486741 CTXND1A0A1B0GTU2 59 aa11.08□□□□□ -0.64
HMGN1-216ENST00000486741 PLAUP00749 431 aa11.08□□□□□ -0.64
HMGN1-216ENST00000486741 RHOBP62745 196 aa11.08□□□□□ -0.64
HMGN1-216ENST00000486741 SPACA3Q8IXA5 215 aa11.08□□□□□ -0.64
HMGN1-216ENST00000486741 C1orf174Q8IYL3 243 aa11.08□□□□□ -0.64
HMGN1-216ENST00000486741 TCF19Q9Y242 345 aa11.08□□□□□ -0.64
HMGN1-216ENST00000486741 CEP192Q8TEP8 1941 aa11.08□□□□□ -0.64
HMGN1-216ENST00000486741 RPL30P62888 115 aaKnown RBP11.08□□□□□ -0.64
HMGN1-216ENST00000486741 SERF2P84101 59 aa11.08□□□□□ -0.64
HMGN1-216ENST00000486741 ZNF474Q6S9Z5 364 aaPredicted RBP11.08□□□□□ -0.64
HMGN1-216ENST00000486741 DBX2Q6ZNG2 339 aa11.08□□□□□ -0.64
HMGN1-216ENST00000486741 LYPD6Q86Y78 171 aa11.08□□□□□ -0.64
HMGN1-216ENST00000486741 WDR31Q8NA23 367 aa11.08□□□□□ -0.64
HMGN1-216ENST00000486741 SMIM8Q96KF7 97 aa11.08□□□□□ -0.64
HMGN1-216ENST00000486741 RAB1BQ9H0U4 201 aa11.08□□□□□ -0.64
HMGN1-216ENST00000486741 UBTD1Q9HAC8 227 aa11.08□□□□□ -0.64
HMGN1-216ENST00000486741 IFNL4K9M1U5 179 aa11.08□□□□□ -0.64
HMGN1-216ENST00000486741 HSPB1P04792 205 aaKnown RBP11.08□□□□□ -0.64
HMGN1-216ENST00000486741 REG1AP05451 166 aa11.08□□□□□ -0.64
HMGN1-216ENST00000486741 GALR1P47211 349 aa11.08□□□□□ -0.64
HMGN1-216ENST00000486741 SPCS3P61009 180 aa11.08□□□□□ -0.64
HMGN1-216ENST00000486741 ID3Q02535 119 aa11.08□□□□□ -0.64
HMGN1-216ENST00000486741 OR4D5Q8NGN0 318 aa11.08□□□□□ -0.64
HMGN1-216ENST00000486741 JPT1Q9UK76 154 aa11.08□□□□□ -0.64
HMGN1-216ENST00000486741 RAXQ9Y2V3 346 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms