RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 MAP1LC3AQ9H492 121 aa5.5□□□□□ -1.53
HDAC3-209ENST00000486618 ADGRL4Q9HBW9 690 aa5.5□□□□□ -1.53
HDAC3-209ENST00000486618 RETNQ9HD89 108 aa5.5□□□□□ -1.53
HDAC3-209ENST00000486618 CCDC167Q9P0B6 97 aa5.5□□□□□ -1.53
HDAC3-209ENST00000486618 SS18L2Q9UHA2 77 aa5.5□□□□□ -1.53
HDAC3-209ENST00000486618 SCP2D1Q9UJQ7 156 aa5.5□□□□□ -1.53
HDAC3-209ENST00000486618 STUB1Q9UNE7 303 aa5.5□□□□□ -1.53
HDAC3-209ENST00000486618 RCL1Q9Y2P8 373 aaKnown RBP5.5□□□□□ -1.53
HDAC3-209ENST00000486618 UGT2A1Q9Y4X1 527 aa5.5□□□□□ -1.53
HDAC3-209ENST00000486618 A0A1B0GU03 582 aa5.49□□□□□ -1.53
HDAC3-209ENST00000486618 TRAPPC13A5PLN9 417 aa5.49□□□□□ -1.53
HDAC3-209ENST00000486618 CXorf65A6NEN9 183 aa5.49□□□□□ -1.53
HDAC3-209ENST00000486618 F6UZH7 168 aa5.49□□□□□ -1.53
HDAC3-209ENST00000486618 XKRYO14609 159 aa5.49□□□□□ -1.53
HDAC3-209ENST00000486618 ATP5LO75964 103 aa5.49□□□□□ -1.53
HDAC3-209ENST00000486618 ARG1P05089 322 aa5.49□□□□□ -1.53
HDAC3-209ENST00000486618 RBMXP38159 391 aaKnown RBP5.49□□□□□ -1.53
HDAC3-209ENST00000486618 GLP1RP43220 463 aa5.49□□□□□ -1.53
HDAC3-209ENST00000486618 LGALS7P47929 136 aa5.49□□□□□ -1.53
HDAC3-209ENST00000486618 TAS2R43P59537 309 aa5.49□□□□□ -1.53
HDAC3-209ENST00000486618 PAFAH1B2P68402 229 aa5.49□□□□□ -1.53
HDAC3-209ENST00000486618 RPL18Q07020 188 aaKnown RBP5.49□□□□□ -1.53
HDAC3-209ENST00000486618 ATXN7L3Q14CW9 347 aaPredicted RBP5.49□□□□□ -1.53
HDAC3-209ENST00000486618 TP53I3Q53FA7 332 aa5.49□□□□□ -1.53
HDAC3-209ENST00000486618 ENTPD8Q5MY95 495 aa5.49□□□□□ -1.53
HDAC3-209ENST00000486618 SLC25A47Q6Q0C1 308 aa5.49□□□□□ -1.53
HDAC3-209ENST00000486618 Q6ZSN1 163 aa5.49□□□□□ -1.53
HDAC3-209ENST00000486618 FAM19A5Q7Z5A7 132 aaPredicted RBP5.49□□□□□ -1.53
HDAC3-209ENST00000486618 THAP8Q8NA92 274 aa5.49□□□□□ -1.53
HDAC3-209ENST00000486618 OR8G5Q8NG78 346 aa5.49□□□□□ -1.53
HDAC3-209ENST00000486618 OR5B3Q8NH48 314 aa5.49□□□□□ -1.53
HDAC3-209ENST00000486618 C10orf82Q8WW14 230 aa5.49□□□□□ -1.53
HDAC3-209ENST00000486618 GRAMD2BQ96HH9 432 aa5.49□□□□□ -1.53
HDAC3-209ENST00000486618 CLCC1Q96S66 551 aa5.49□□□□□ -1.53
HDAC3-209ENST00000486618 TBX15Q96SF7 602 aa5.49□□□□□ -1.53
HDAC3-209ENST00000486618 MROQ9BYG7 248 aa5.49□□□□□ -1.53
HDAC3-209ENST00000486618 ENY2Q9NPA8 101 aa5.49□□□□□ -1.53
HDAC3-209ENST00000486618 SDR39U1Q9NRG7 319 aaPredicted RBP5.49□□□□□ -1.53
HDAC3-209ENST00000486618 FAM206AQ9NX38 181 aa5.49□□□□□ -1.53
HDAC3-209ENST00000486618 WDR83OSQ9Y284 106 aa5.49□□□□□ -1.53
HDAC3-209ENST00000486618 A3GALT2U3KPV4 340 aa5.49□□□□□ -1.53
HDAC3-209ENST00000486618 TENM3Q9P273 2699 aa5.48□□□□□ -1.53
HDAC3-209ENST00000486618 MEIOCA2RUB1 952 aa5.48□□□□□ -1.53
HDAC3-209ENST00000486618 FAM74A7A6NL05 159 aa5.48□□□□□ -1.53
HDAC3-209ENST00000486618 DVL1O14640 695 aa5.48□□□□□ -1.53
HDAC3-209ENST00000486618 ORC5O43913 435 aa5.48□□□□□ -1.53
HDAC3-209ENST00000486618 RHOBP62745 196 aa5.48□□□□□ -1.53
HDAC3-209ENST00000486618 FMODQ06828 376 aa5.48□□□□□ -1.53
HDAC3-209ENST00000486618 GAGE2BQ13066 116 aa5.48□□□□□ -1.53
HDAC3-209ENST00000486618 PLA2G7Q13093 441 aa5.48□□□□□ -1.53
HDAC3-209ENST00000486618 BTN1A1Q13410 526 aa5.48□□□□□ -1.53
HDAC3-209ENST00000486618 OXA1LQ15070 435 aa5.48□□□□□ -1.53
HDAC3-209ENST00000486618 GAGE2EQ4V326 116 aa5.48□□□□□ -1.53
HDAC3-209ENST00000486618 FAM74A3Q4VXF1 159 aa5.48□□□□□ -1.53
HDAC3-209ENST00000486618 GAGE2AQ6NT46 116 aa5.48□□□□□ -1.53
HDAC3-209ENST00000486618 LYPD2Q6UXB3 125 aa5.48□□□□□ -1.53
HDAC3-209ENST00000486618 OR5AS1Q8N127 324 aa5.48□□□□□ -1.53
HDAC3-209ENST00000486618 C9orf62Q8N4C0 152 aa5.48□□□□□ -1.53
HDAC3-209ENST00000486618 DHRSXQ8N5I4 330 aa5.48□□□□□ -1.53
HDAC3-209ENST00000486618 OR4S1Q8NGB4 309 aa5.48□□□□□ -1.53
HDAC3-209ENST00000486618 OR51S1Q8NGJ8 323 aa5.48□□□□□ -1.53
HDAC3-209ENST00000486618 OR6T1Q8NGN1 323 aa5.48□□□□□ -1.53
HDAC3-209ENST00000486618 OR9I1Q8NGQ6 314 aa5.48□□□□□ -1.53
HDAC3-209ENST00000486618 OR5R1Q8NH85 324 aa5.48□□□□□ -1.53
HDAC3-209ENST00000486618 RCN3Q96D15 328 aa5.48□□□□□ -1.53
HDAC3-209ENST00000486618 WFDC6Q9BQY6 131 aa5.48□□□□□ -1.53
HDAC3-209ENST00000486618 OR10A2Q9H208 303 aa5.48□□□□□ -1.53
HDAC3-209ENST00000486618 AAMDCQ9H7C9 122 aa5.48□□□□□ -1.53
HDAC3-209ENST00000486618 GAGE2DQ9UEU5 116 aa5.48□□□□□ -1.53
HDAC3-209ENST00000486618 PRO0628Q9UI54 55 aa5.48□□□□□ -1.53
HDAC3-209ENST00000486618 SLC7A7Q9UM01 511 aa5.48□□□□□ -1.53
HDAC3-209ENST00000486618 PSG8Q9UQ74 426 aa5.48□□□□□ -1.53
HDAC3-209ENST00000486618 TCF19Q9Y242 345 aa5.48□□□□□ -1.53
HDAC3-209ENST00000486618 ZFP30Q9Y2G7 519 aa5.48□□□□□ -1.53
HDAC3-209ENST00000486618 POLR1DQ9Y2S0 133 aa5.48□□□□□ -1.53
HDAC3-209ENST00000486618 KLHDC2Q9Y2U9 406 aa5.48□□□□□ -1.53
HDAC3-209ENST00000486618 MED31Q9Y3C7 131 aa5.48□□□□□ -1.53
HDAC3-209ENST00000486618 LSM5Q9Y4Y9 91 aaKnown RBP5.48□□□□□ -1.53
HDAC3-209ENST00000486618 ETV7Q9Y603 341 aa5.48□□□□□ -1.53
HDAC3-209ENST00000486618 HSPE1-MOB4S4R3N1 261 aa5.48□□□□□ -1.53
HDAC3-209ENST00000486618 IGKV1D-43A0A0B4J1Z2 117 aa5.47□□□□□ -1.53
HDAC3-209ENST00000486618 DHRS7CA6NNS2 312 aa5.47□□□□□ -1.53
HDAC3-209ENST00000486618 E5RGE8 158 aa5.47□□□□□ -1.53
HDAC3-209ENST00000486618 F5H5P2 479 aa5.47□□□□□ -1.53
HDAC3-209ENST00000486618 GYG2O15488 501 aa5.47□□□□□ -1.53
HDAC3-209ENST00000486618 SYNGR1O43759 233 aa5.47□□□□□ -1.53
HDAC3-209ENST00000486618 SCO1O75880 301 aa5.47□□□□□ -1.53
HDAC3-209ENST00000486618 LYPD3O95274 346 aa5.47□□□□□ -1.53
HDAC3-209ENST00000486618 SLPIP03973 132 aa5.47□□□□□ -1.53
HDAC3-209ENST00000486618 OPN1SWP03999 348 aa5.47□□□□□ -1.53
HDAC3-209ENST00000486618 SULT1A3P0DMM9 295 aa5.47□□□□□ -1.53
HDAC3-209ENST00000486618 SULT1A4P0DMN0 295 aa5.47□□□□□ -1.53
HDAC3-209ENST00000486618 HIST1H1BP16401 226 aaKnown RBP5.47□□□□□ -1.53
HDAC3-209ENST00000486618 HTR1DP28221 377 aa5.47□□□□□ -1.53
HDAC3-209ENST00000486618 RPL12P30050 165 aaKnown RBP5.47□□□□□ -1.53
HDAC3-209ENST00000486618 RPL4P36578 427 aaKnown RBP5.47□□□□□ -1.53
HDAC3-209ENST00000486618 GSK3BP49841 420 aa5.47□□□□□ -1.53
HDAC3-209ENST00000486618 RPL31P62899 125 aaKnown RBP5.47□□□□□ -1.53
HDAC3-209ENST00000486618 BAXQ07812 192 aa5.47□□□□□ -1.53
HDAC3-209ENST00000486618 ECH1Q13011 328 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms