RNA–Protein interactions for RNA: ENST00000486227.5

HDAC6-228, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 4,718 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-228ENST00000486227 C9orf106Q8NAJ2 232 aa9.38□□□□□ -0.91
HDAC6-228ENST00000486227 NDUFAF3Q9BU61 184 aa9.38□□□□□ -0.91
HDAC6-228ENST00000486227 SCN8AQ9UQD0 1980 aa9.38□□□□□ -0.91
HDAC6-228ENST00000486227 H0Y980 276 aa9.37□□□□□ -0.91
HDAC6-228ENST00000486227 CELA3BP08861 270 aa9.37□□□□□ -0.91
HDAC6-228ENST00000486227 SRP19P09132 144 aaKnown RBP9.37□□□□□ -0.91
HDAC6-228ENST00000486227 IGHV1-2P23083 117 aa9.37□□□□□ -0.91
HDAC6-228ENST00000486227 FOXG1P55316 489 aaPredicted RBP9.37□□□□□ -0.91
HDAC6-228ENST00000486227 SRSF4Q08170 494 aaKnown RBP9.37□□□□□ -0.91
HDAC6-228ENST00000486227 TMEM187Q14656 261 aa9.37□□□□□ -0.91
HDAC6-228ENST00000486227 HLA-DRB5Q30154 266 aa9.37□□□□□ -0.91
HDAC6-228ENST00000486227 FGFBP3Q8TAT2 258 aa9.37□□□□□ -0.91
HDAC6-228ENST00000486227 VN1R17PQ8TDU5 208 aa9.37□□□□□ -0.91
HDAC6-228ENST00000486227 PRR27Q6MZM9 219 aa9.37□□□□□ -0.91
HDAC6-228ENST00000486227 C1QL4Q86Z23 238 aa9.37□□□□□ -0.91
HDAC6-228ENST00000486227 OR52M1Q8NGK5 317 aa9.37□□□□□ -0.91
HDAC6-228ENST00000486227 LYZL4Q96KX0 146 aa9.37□□□□□ -0.91
HDAC6-228ENST00000486227 TIMM9Q9Y5J7 89 aa9.37□□□□□ -0.91
HDAC6-228ENST00000486227 HEATR5AQ86XA9 2040 aa9.37□□□□□ -0.91
HDAC6-228ENST00000486227 SIAH2O43255 324 aa9.37□□□□□ -0.91
HDAC6-228ENST00000486227 ADCYAP1P18509 176 aa9.37□□□□□ -0.91
HDAC6-228ENST00000486227 HEPN1Q6WQI6 88 aa9.37□□□□□ -0.91
HDAC6-228ENST00000486227 Q8WTZ3 238 aa9.37□□□□□ -0.91
HDAC6-228ENST00000486227 SSMEM1Q8WWF3 244 aa9.37□□□□□ -0.91
HDAC6-228ENST00000486227 RTBDNQ9BSG5 229 aaPredicted RBP9.37□□□□□ -0.91
HDAC6-228ENST00000486227 CYTL1Q9NRR1 136 aa9.37□□□□□ -0.91
HDAC6-228ENST00000486227 ZNF253O75346 499 aa9.37□□□□□ -0.91
HDAC6-228ENST00000486227 APOBEC3AP31941 199 aaPredicted RBP9.37□□□□□ -0.91
HDAC6-228ENST00000486227 GGNQ86UU5 652 aa9.37□□□□□ -0.91
HDAC6-228ENST00000486227 FLYWCH2Q96CP2 140 aaKnown RBP9.37□□□□□ -0.91
HDAC6-228ENST00000486227 MARS2Q96GW9 593 aaKnown RBP9.37□□□□□ -0.91
HDAC6-228ENST00000486227 ZNF714Q96N38 554 aa9.37□□□□□ -0.91
HDAC6-228ENST00000486227 ABHD14AQ9BUJ0 271 aa9.37□□□□□ -0.91
HDAC6-228ENST00000486227 TM2D1Q9BX74 207 aa9.37□□□□□ -0.91
HDAC6-228ENST00000486227 LOC102723971A0A1B0GUV8 181 aa9.36□□□□□ -0.91
HDAC6-228ENST00000486227 J3QW42 95 aa9.36□□□□□ -0.91
HDAC6-228ENST00000486227 IZUMO4Q1ZYL8 232 aa9.36□□□□□ -0.91
HDAC6-228ENST00000486227 ACSF3Q4G176 576 aaPredicted RBP9.36□□□□□ -0.91
HDAC6-228ENST00000486227 LRP11Q86VZ4 500 aa9.36□□□□□ -0.91
HDAC6-228ENST00000486227 C11orf42Q8N5U0 333 aa9.36□□□□□ -0.91
HDAC6-228ENST00000486227 OR5R1Q8NH85 324 aa9.36□□□□□ -0.91
HDAC6-228ENST00000486227 RSG1Q9BU20 258 aa9.36□□□□□ -0.91
HDAC6-228ENST00000486227 GLRXP35754 106 aa9.36□□□□□ -0.91
HDAC6-228ENST00000486227 PSG7Q13046 419 aa9.36□□□□□ -0.91
HDAC6-228ENST00000486227 WDR25Q64LD2 544 aaPredicted RBP9.36□□□□□ -0.91
HDAC6-228ENST00000486227 MSRB2Q9Y3D2 182 aa9.36□□□□□ -0.91
HDAC6-228ENST00000486227 HELZP42694 1942 aaKnown RBP9.36□□□□□ -0.91
HDAC6-228ENST00000486227 RAB29O14966 203 aa9.36□□□□□ -0.91
HDAC6-228ENST00000486227 NDUFS6O75380 124 aaKnown RBP9.36□□□□□ -0.91
HDAC6-228ENST00000486227 GFRA1P56159 465 aa9.36□□□□□ -0.91
HDAC6-228ENST00000486227 MMDQ15546 238 aa9.36□□□□□ -0.91
HDAC6-228ENST00000486227 TBR1Q16650 682 aa9.36□□□□□ -0.91
HDAC6-228ENST00000486227 AARDQ4LEZ3 155 aa9.36□□□□□ -0.91
HDAC6-228ENST00000486227 SGMS2Q8NHU3 365 aa9.36□□□□□ -0.91
HDAC6-228ENST00000486227 FANCMQ8IYD8 2048 aa9.36□□□□□ -0.91
HDAC6-228ENST00000486227 GNG4P50150 75 aa9.36□□□□□ -0.91
HDAC6-228ENST00000486227 RHOBP62745 196 aa9.36□□□□□ -0.91
HDAC6-228ENST00000486227 ZNF818PQ6ZRF7 136 aa9.36□□□□□ -0.91
HDAC6-228ENST00000486227 IL36RNQ9UBH0 155 aa9.36□□□□□ -0.91
HDAC6-228ENST00000486227 PCNX2A6NKB5 2137 aa9.35□□□□□ -0.91
HDAC6-228ENST00000486227 J3QR89 54 aa9.35□□□□□ -0.91
HDAC6-228ENST00000486227 HIST1H2BKO60814 126 aa9.35□□□□□ -0.91
HDAC6-228ENST00000486227 HIST1H2BJP06899 126 aa9.35□□□□□ -0.91
HDAC6-228ENST00000486227 HIST1H2BOP23527 126 aa9.35□□□□□ -0.91
HDAC6-228ENST00000486227 HIST1H2BBP33778 126 aa9.35□□□□□ -0.91
HDAC6-228ENST00000486227 HIST1H2BDP58876 126 aa9.35□□□□□ -0.91
HDAC6-228ENST00000486227 HIST1H2BCP62807 126 aa9.35□□□□□ -0.91
HDAC6-228ENST00000486227 FHL1Q13642 323 aa9.35□□□□□ -0.91
HDAC6-228ENST00000486227 HIST2H2BEQ16778 126 aa9.35□□□□□ -0.91
HDAC6-228ENST00000486227 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.35□□□□□ -0.91
HDAC6-228ENST00000486227 OR4B1Q8NGF8 309 aa9.35□□□□□ -0.91
HDAC6-228ENST00000486227 HIST1H2BHQ93079 126 aa9.35□□□□□ -0.91
HDAC6-228ENST00000486227 WBP1Q96G27 269 aa9.35□□□□□ -0.91
HDAC6-228ENST00000486227 HIST1H2BNQ99877 126 aa9.35□□□□□ -0.91
HDAC6-228ENST00000486227 HIST1H2BMQ99879 126 aa9.35□□□□□ -0.91
HDAC6-228ENST00000486227 CHEK1O14757 476 aa9.35□□□□□ -0.91
HDAC6-228ENST00000486227 FGFRL1Q8N441 504 aa9.35□□□□□ -0.91
HDAC6-228ENST00000486227 GPR146Q96CH1 333 aa9.35□□□□□ -0.91
HDAC6-228ENST00000486227 HSPB9Q9BQS6 159 aa9.35□□□□□ -0.91
HDAC6-228ENST00000486227 SH2D2AQ9NP31 389 aa9.35□□□□□ -0.91
HDAC6-228ENST00000486227 SPRR3Q9UBC9 169 aa9.35□□□□□ -0.91
HDAC6-228ENST00000486227 FBLN5Q9UBX5 448 aa9.35□□□□□ -0.91
HDAC6-228ENST00000486227 PRNDQ9UKY0 176 aa9.35□□□□□ -0.91
HDAC6-228ENST00000486227 IGHV1-69-2A0A0G2JMI3 117 aa9.35□□□□□ -0.91
HDAC6-228ENST00000486227 DIRC3C9JPN6 131 aa9.35□□□□□ -0.91
HDAC6-228ENST00000486227 K7N7A8 449 aa9.35□□□□□ -0.91
HDAC6-228ENST00000486227 APELAP0DMC3 54 aa9.35□□□□□ -0.91
HDAC6-228ENST00000486227 ELOBQ15370 118 aa9.35□□□□□ -0.91
HDAC6-228ENST00000486227 PAQR4Q8N4S7 273 aaPredicted RBP9.35□□□□□ -0.91
HDAC6-228ENST00000486227 C1orf162Q8NEQ5 155 aaPredicted RBP9.35□□□□□ -0.91
HDAC6-228ENST00000486227 RNASE6Q93091 150 aaKnown RBP9.35□□□□□ -0.91
HDAC6-228ENST00000486227 SPINK4O60575 86 aa9.34□□□□□ -0.91
HDAC6-228ENST00000486227 NPY1RP25929 384 aa9.34□□□□□ -0.91
HDAC6-228ENST00000486227 UCP3P55916 312 aa9.34□□□□□ -0.91
HDAC6-228ENST00000486227 OR1L6Q8NGR2 347 aa9.34□□□□□ -0.91
HDAC6-228ENST00000486227 LEAP2Q969E1 77 aa9.34□□□□□ -0.91
HDAC6-228ENST00000486227 AAMDCQ9H7C9 122 aa9.34□□□□□ -0.91
HDAC6-228ENST00000486227 CALYQ9NYX4 217 aa9.34□□□□□ -0.91
HDAC6-228ENST00000486227 KLF2Q9Y5W3 355 aaPredicted RBP9.34□□□□□ -0.91
HDAC6-228ENST00000486227 LY6G6EA0A0G2JKS1 128 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms