RNA–Protein interactions for RNA: ENST00000485955.1

VPS41-213, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-213ENST00000485955 EMX1Q04741 257 aaPredicted RBP1.92□□□□□ -2.1
VPS41-213ENST00000485955 PRDX1Q06830 199 aaKnown RBP1.92□□□□□ -2.1
VPS41-213ENST00000485955 IHHQ14623 411 aa1.92□□□□□ -2.1
VPS41-213ENST00000485955 CDK10Q15131 360 aa1.92□□□□□ -2.1
VPS41-213ENST00000485955 SURF2Q15527 256 aaPredicted RBP1.92□□□□□ -2.1
VPS41-213ENST00000485955 SMIM21Q3B7S5 101 aa1.92□□□□□ -2.1
VPS41-213ENST00000485955 CDNFQ49AH0 187 aa1.92□□□□□ -2.1
VPS41-213ENST00000485955 CLEC12AQ5QGZ9 265 aa1.92□□□□□ -2.1
VPS41-213ENST00000485955 AVPI1Q5T686 147 aa1.92□□□□□ -2.1
VPS41-213ENST00000485955 ANKRD22Q5VYY1 191 aa1.92□□□□□ -2.1
VPS41-213ENST00000485955 TEX36Q5VZQ5 186 aa1.92□□□□□ -2.1
VPS41-213ENST00000485955 ELP2Q6IA86 826 aa1.92□□□□□ -2.1
VPS41-213ENST00000485955 ZFP1Q6P2D0 407 aa1.92□□□□□ -2.1
VPS41-213ENST00000485955 TMEM205Q6UW68 189 aa1.92□□□□□ -2.1
VPS41-213ENST00000485955 SPNS3Q6ZMD2 512 aa1.92□□□□□ -2.1
VPS41-213ENST00000485955 IDO2Q6ZQW0 420 aa1.92□□□□□ -2.1
VPS41-213ENST00000485955 GRINAQ7Z429 371 aa1.92□□□□□ -2.1
VPS41-213ENST00000485955 HMGN2P46Q86SG4 172 aa1.92□□□□□ -2.1
VPS41-213ENST00000485955 ZBTB8OSQ8IWT0 167 aa1.92□□□□□ -2.1
VPS41-213ENST00000485955 EIF4E3Q8N5X7 224 aaKnown RBP1.92□□□□□ -2.1
VPS41-213ENST00000485955 OR4P4Q8NGL7 312 aa1.92□□□□□ -2.1
VPS41-213ENST00000485955 MFSD8Q8NHS3 518 aa1.92□□□□□ -2.1
VPS41-213ENST00000485955 GRPEL2Q8TAA5 225 aa1.92□□□□□ -2.1
VPS41-213ENST00000485955 RXFP2Q8WXD0 754 aa1.92□□□□□ -2.1
VPS41-213ENST00000485955 TMBIM1Q969X1 311 aa1.92□□□□□ -2.1
VPS41-213ENST00000485955 PYURFQ96I23 114 aa1.92□□□□□ -2.1
VPS41-213ENST00000485955 BIRC8Q96P09 236 aa1.92□□□□□ -2.1
VPS41-213ENST00000485955 OR2M4Q96R27 311 aa1.92□□□□□ -2.1
VPS41-213ENST00000485955 METTL26Q96S19 204 aa1.92□□□□□ -2.1
VPS41-213ENST00000485955 TBX5Q99593 518 aa1.92□□□□□ -2.1
VPS41-213ENST00000485955 MROQ9BYG7 248 aa1.92□□□□□ -2.1
VPS41-213ENST00000485955 ABCG5Q9H222 651 aa1.92□□□□□ -2.1
VPS41-213ENST00000485955 VSIRQ9H7M9 311 aa1.92□□□□□ -2.1
VPS41-213ENST00000485955 MARCOQ9UEW3 520 aaPredicted RBP1.92□□□□□ -2.1
VPS41-213ENST00000485955 SS18L2Q9UHA2 77 aa1.92□□□□□ -2.1
VPS41-213ENST00000485955 ANGPT4Q9Y264 503 aa1.92□□□□□ -2.1
VPS41-213ENST00000485955 UTP11Q9Y3A2 253 aaKnown RBP1.92□□□□□ -2.1
VPS41-213ENST00000485955 KCNE3Q9Y6H6 103 aa1.92□□□□□ -2.1
VPS41-213ENST00000485955 NBEAL1Q6ZS30 2694 aa1.92□□□□□ -2.1
VPS41-213ENST00000485955 LAMA1P25391 3075 aa1.92□□□□□ -2.1
VPS41-213ENST00000485955 CLUHO75153 1309 aa1.91□□□□□ -2.1
VPS41-213ENST00000485955 IGSF9BQ9UPX0 1349 aa1.91□□□□□ -2.1
VPS41-213ENST00000485955 PHIPQ8WWQ0 1821 aa1.91□□□□□ -2.1
VPS41-213ENST00000485955 ATRQ13535 2644 aa1.91□□□□□ -2.1
VPS41-213ENST00000485955 TRAV39A0A0B4J263 110 aa1.91□□□□□ -2.1
VPS41-213ENST00000485955 A0A0B4J2A0 478 aa1.91□□□□□ -2.1
VPS41-213ENST00000485955 A0A1B0GV90 55 aa1.91□□□□□ -2.1
VPS41-213ENST00000485955 FAM183AA6NL82 134 aa1.91□□□□□ -2.1
VPS41-213ENST00000485955 H7C417 338 aa1.91□□□□□ -2.1
VPS41-213ENST00000485955 I3L4J1 428 aa1.91□□□□□ -2.1
VPS41-213ENST00000485955 C6orf47O95873 294 aa1.91□□□□□ -2.1
VPS41-213ENST00000485955 OR5G3P0C626 314 aa1.91□□□□□ -2.1
VPS41-213ENST00000485955 GKN3PP0CG01 181 aa1.91□□□□□ -2.1
VPS41-213ENST00000485955 IL9P15248 144 aa1.91□□□□□ -2.1
VPS41-213ENST00000485955 CXCL3P19876 107 aa1.91□□□□□ -2.1
VPS41-213ENST00000485955 GZMHP20718 246 aa1.91□□□□□ -2.1
VPS41-213ENST00000485955 OGNP20774 298 aaKnown RBP1.91□□□□□ -2.1
VPS41-213ENST00000485955 ERP29P30040 261 aaKnown RBP1.91□□□□□ -2.1
VPS41-213ENST00000485955 GGT2P36268 569 aa1.91□□□□□ -2.1
VPS41-213ENST00000485955 OR1E2P47887 323 aa1.91□□□□□ -2.1
VPS41-213ENST00000485955 REG1BP48304 166 aa1.91□□□□□ -2.1
VPS41-213ENST00000485955 GZMMP51124 257 aa1.91□□□□□ -2.1
VPS41-213ENST00000485955 RPS23P62266 143 aaKnown RBP1.91□□□□□ -2.1
VPS41-213ENST00000485955 RHOBP62745 196 aa1.91□□□□□ -2.1
VPS41-213ENST00000485955 CACNG7P62955 275 aa1.91□□□□□ -2.1
VPS41-213ENST00000485955 RPS21P63220 83 aaKnown RBP1.91□□□□□ -2.1
VPS41-213ENST00000485955 RUNX1Q01196 453 aa1.91□□□□□ -2.1
VPS41-213ENST00000485955 QPRTQ15274 297 aa1.91□□□□□ -2.1
VPS41-213ENST00000485955 ACOT6Q3I5F7 207 aaPredicted RBP1.91□□□□□ -2.1
VPS41-213ENST00000485955 LRRC10Q5BKY1 277 aa1.91□□□□□ -2.1
VPS41-213ENST00000485955 ZNF684Q5T5D7 378 aa1.91□□□□□ -2.1
VPS41-213ENST00000485955 SAMD13Q5VXD3 122 aa1.91□□□□□ -2.1
VPS41-213ENST00000485955 UGT2A3Q6UWM9 527 aa1.91□□□□□ -2.1
VPS41-213ENST00000485955 SLC16A13Q7RTY0 426 aa1.91□□□□□ -2.1
VPS41-213ENST00000485955 NAA40Q86UY6 237 aa1.91□□□□□ -2.1
VPS41-213ENST00000485955 CALHM3Q86XJ0 350 aa1.91□□□□□ -2.1
VPS41-213ENST00000485955 ZNF567Q8N184 647 aa1.91□□□□□ -2.1
VPS41-213ENST00000485955 SLC35F6Q8N357 371 aa1.91□□□□□ -2.1
VPS41-213ENST00000485955 MUC15Q8N387 334 aa1.91□□□□□ -2.1
VPS41-213ENST00000485955 SLC35G3Q8N808 338 aa1.91□□□□□ -2.1
VPS41-213ENST00000485955 ZNF439Q8NDP4 499 aa1.91□□□□□ -2.1
VPS41-213ENST00000485955 ST6GALNAC3Q8NDV1 305 aa1.91□□□□□ -2.1
VPS41-213ENST00000485955 OR9A2Q8NGT5 310 aa1.91□□□□□ -2.1
VPS41-213ENST00000485955 OR10J6PQ8NGY7 276 aa1.91□□□□□ -2.1
VPS41-213ENST00000485955 MCFD2Q8NI22 146 aa1.91□□□□□ -2.1
VPS41-213ENST00000485955 LHFPL5Q8TAF8 219 aa1.91□□□□□ -2.1
VPS41-213ENST00000485955 ABHD3Q8WU67 409 aa1.91□□□□□ -2.1
VPS41-213ENST00000485955 DCUN1D1Q96GG9 259 aa1.91□□□□□ -2.1
VPS41-213ENST00000485955 DIRAS2Q96HU8 199 aa1.91□□□□□ -2.1
VPS41-213ENST00000485955 ANKRD36BP1Q96IX9 119 aa1.91□□□□□ -2.1
VPS41-213ENST00000485955 FAM19A4Q96LR4 140 aa1.91□□□□□ -2.1
VPS41-213ENST00000485955 C2orf88Q9BSF0 95 aa1.91□□□□□ -2.1
VPS41-213ENST00000485955 MARVELD1Q9BSK0 173 aa1.91□□□□□ -2.1
VPS41-213ENST00000485955 SUCNR1Q9BXA5 334 aa1.91□□□□□ -2.1
VPS41-213ENST00000485955 CHST5Q9GZS9 411 aa1.91□□□□□ -2.1
VPS41-213ENST00000485955 SLIRPQ9GZT3 109 aaKnown RBP1.91□□□□□ -2.1
VPS41-213ENST00000485955 DEFB127Q9H1M4 99 aa1.91□□□□□ -2.1
VPS41-213ENST00000485955 OR51E2Q9H255 320 aa1.91□□□□□ -2.1
VPS41-213ENST00000485955 POMKQ9H5K3 350 aa1.91□□□□□ -2.1
VPS41-213ENST00000485955 TPT1P8Q9HAU6 139 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms