RNA–Protein interactions for RNA: ENST00000485870.1

COL1A1-206, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 403 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-206ENST00000485870 SLC5A7Q9GZV3 580 aa14.29□□□□□ -0.12
COL1A1-206ENST00000485870 ZNF355PQ9NSJ1 428 aa14.29□□□□□ -0.12
COL1A1-206ENST00000485870 EHFQ9NZC4 300 aa14.29□□□□□ -0.12
COL1A1-206ENST00000485870 SMIM31A0A1B0GVY4 71 aa14.28□□□□□ -0.12
COL1A1-206ENST00000485870 IGHV3-11P01762 117 aa14.28□□□□□ -0.12
COL1A1-206ENST00000485870 ZNF616Q08AN1 781 aa14.28□□□□□ -0.12
COL1A1-206ENST00000485870 PRSS8Q16651 343 aa14.28□□□□□ -0.12
COL1A1-206ENST00000485870 ASPHD1Q5U4P2 390 aa14.28□□□□□ -0.12
COL1A1-206ENST00000485870 TMEM17Q86X19 198 aa14.28□□□□□ -0.12
COL1A1-206ENST00000485870 SNX29P2Q8IUI4 249 aa14.28□□□□□ -0.12
COL1A1-206ENST00000485870 OR4S2Q8NH73 311 aa14.28□□□□□ -0.12
COL1A1-206ENST00000485870 PHB2Q99623 299 aa14.28□□□□□ -0.12
COL1A1-206ENST00000485870 ANAPC10Q9UM13 185 aa14.28□□□□□ -0.12
COL1A1-206ENST00000485870 PMP2P02689 132 aa14.27□□□□□ -0.13
COL1A1-206ENST00000485870 TRGV3P03979 118 aa14.27□□□□□ -0.13
COL1A1-206ENST00000485870 LGALS1P09382 135 aaKnown RBP14.27□□□□□ -0.13
COL1A1-206ENST00000485870 OR8U8P0C7N1 319 aa14.27□□□□□ -0.13
COL1A1-206ENST00000485870 APELAP0DMC3 54 aa14.27□□□□□ -0.13
COL1A1-206ENST00000485870 ELK1P19419 428 aa14.27□□□□□ -0.13
COL1A1-206ENST00000485870 RFX2P48378 723 aa14.27□□□□□ -0.13
COL1A1-206ENST00000485870 ALDH3B2P48448 385 aa14.27□□□□□ -0.13
COL1A1-206ENST00000485870 HERV-K104P61576 105 aa14.27□□□□□ -0.13
COL1A1-206ENST00000485870 ZNF66Q6ZN08 573 aa14.27□□□□□ -0.13
COL1A1-206ENST00000485870 VKORC1L1Q8N0U8 176 aa14.27□□□□□ -0.13
COL1A1-206ENST00000485870 POC5Q8NA72 575 aa14.27□□□□□ -0.13
COL1A1-206ENST00000485870 OR5H2Q8NGV7 314 aa14.27□□□□□ -0.13
COL1A1-206ENST00000485870 GIMAP1Q8WWP7 306 aa14.27□□□□□ -0.13
COL1A1-206ENST00000485870 CMTM3Q96MX0 182 aa14.27□□□□□ -0.13
COL1A1-206ENST00000485870 ZNF430Q9H8G1 570 aaPredicted RBP14.27□□□□□ -0.13
COL1A1-206ENST00000485870 MSGN1A6NI15 193 aa14.26□□□□□ -0.13
COL1A1-206ENST00000485870 FAM25AB3EWG3 89 aa14.26□□□□□ -0.13
COL1A1-206ENST00000485870 FAM25CB3EWG5 89 aa14.26□□□□□ -0.13
COL1A1-206ENST00000485870 FAM25GB3EWG6 89 aa14.26□□□□□ -0.13
COL1A1-206ENST00000485870 BRWD1-AS2P59051 145 aa14.26□□□□□ -0.13
COL1A1-206ENST00000485870 EGFEM1PQ0D2K5 195 aa14.26□□□□□ -0.13
COL1A1-206ENST00000485870 MSMO1Q15800 293 aa14.26□□□□□ -0.13
COL1A1-206ENST00000485870 MZT2AQ6P582 158 aa14.26□□□□□ -0.13
COL1A1-206ENST00000485870 AP3S1Q92572 193 aa14.26□□□□□ -0.13
COL1A1-206ENST00000485870 ZNF2Q9BSG1 426 aaPredicted RBP14.26□□□□□ -0.13
COL1A1-206ENST00000485870 SLA2Q9H6Q3 261 aa14.26□□□□□ -0.13
COL1A1-206ENST00000485870 SEC14L6B5MCN3 397 aa14.25□□□□□ -0.13
COL1A1-206ENST00000485870 ACTL6BO94805 426 aa14.25□□□□□ -0.13
COL1A1-206ENST00000485870 ZNF182P17025 639 aaPredicted RBP14.25□□□□□ -0.13
COL1A1-206ENST00000485870 NAT1P18440 290 aa14.25□□□□□ -0.13
COL1A1-206ENST00000485870 KIR2DS2P43631 304 aa14.25□□□□□ -0.13
COL1A1-206ENST00000485870 TAS2R46P59540 309 aa14.25□□□□□ -0.13
COL1A1-206ENST00000485870 DYRK1AQ13627 763 aa14.25□□□□□ -0.13
COL1A1-206ENST00000485870 ZNF818PQ6ZRF7 136 aa14.25□□□□□ -0.13
COL1A1-206ENST00000485870 ZBTB34Q8NCN2 500 aa14.25□□□□□ -0.13
COL1A1-206ENST00000485870 GPX8Q8TED1 209 aa14.25□□□□□ -0.13
COL1A1-206ENST00000485870 SRSF12Q8WXF0 261 aaKnown RBP14.25□□□□□ -0.13
COL1A1-206ENST00000485870 TMEM68Q96MH6 324 aa14.25□□□□□ -0.13
COL1A1-206ENST00000485870 IGHV4OR15-8A0A075B7B6 117 aa14.24□□□□□ -0.13
COL1A1-206ENST00000485870 A0A087WW49 117 aa14.24□□□□□ -0.13
COL1A1-206ENST00000485870 WI2-2373I1.2A0A1W2PRP0 233 aa14.24□□□□□ -0.13
COL1A1-206ENST00000485870 LINC01619G3V211 115 aa14.24□□□□□ -0.13
COL1A1-206ENST00000485870 H3BUA1 57 aa14.24□□□□□ -0.13
COL1A1-206ENST00000485870 K7EIL1 84 aa14.24□□□□□ -0.13
COL1A1-206ENST00000485870 SULT1C2O00338 296 aa14.24□□□□□ -0.13
COL1A1-206ENST00000485870 MPPED1O15442 326 aa14.24□□□□□ -0.13
COL1A1-206ENST00000485870 CREBL2O60519 120 aaPredicted RBP14.24□□□□□ -0.13
COL1A1-206ENST00000485870 HLA-DMAP28067 261 aa14.24□□□□□ -0.13
COL1A1-206ENST00000485870 HRH1P35367 487 aa14.24□□□□□ -0.13
COL1A1-206ENST00000485870 SLURP1P55000 103 aa14.24□□□□□ -0.13
COL1A1-206ENST00000485870 DEFA5Q01523 94 aa14.24□□□□□ -0.13
COL1A1-206ENST00000485870 C10orf55Q5SWW7 151 aa14.24□□□□□ -0.13
COL1A1-206ENST00000485870 C9orf66Q5T8R8 295 aa14.24□□□□□ -0.13
COL1A1-206ENST00000485870 SSX9Q7RTT3 188 aa14.24□□□□□ -0.13
COL1A1-206ENST00000485870 MMD2Q8IY49 270 aa14.24□□□□□ -0.13
COL1A1-206ENST00000485870 SPAG16Q8N0X2 631 aa14.24□□□□□ -0.13
COL1A1-206ENST00000485870 RHOVQ96L33 236 aa14.24□□□□□ -0.13
COL1A1-206ENST00000485870 COA4Q9NYJ1 87 aa14.24□□□□□ -0.13
COL1A1-206ENST00000485870 C13orf42A0A1B0GVH6 325 aa14.23□□□□□ -0.13
COL1A1-206ENST00000485870 RAMP3O60896 148 aa14.23□□□□□ -0.13
COL1A1-206ENST00000485870 KBTBD11O94819 623 aa14.23□□□□□ -0.13
COL1A1-206ENST00000485870 OR2A4O95047 310 aa14.23□□□□□ -0.13
COL1A1-206ENST00000485870 CATR1Q13166 79 aa14.23□□□□□ -0.13
COL1A1-206ENST00000485870 RNASE12Q5GAN4 147 aaKnown RBP14.23□□□□□ -0.13
COL1A1-206ENST00000485870 AADACL3Q5VUY0 350 aa14.23□□□□□ -0.13
COL1A1-206ENST00000485870 DHRS11Q6UWP2 260 aa14.23□□□□□ -0.13
COL1A1-206ENST00000485870 CLVS1Q8IUQ0 354 aaPredicted RBP14.23□□□□□ -0.13
COL1A1-206ENST00000485870 LYSMD2Q8IV50 215 aa14.23□□□□□ -0.13
COL1A1-206ENST00000485870 OR51H1Q8NH63 302 aa14.23□□□□□ -0.13
COL1A1-206ENST00000485870 VSTM2AQ8TAG5 236 aa14.23□□□□□ -0.13
COL1A1-206ENST00000485870 DCUN1D4Q92564 292 aa14.23□□□□□ -0.13
COL1A1-206ENST00000485870 OR2A7Q96R45 310 aa14.23□□□□□ -0.13
COL1A1-206ENST00000485870 SCPEP1Q9HB40 452 aa14.23□□□□□ -0.13
COL1A1-206ENST00000485870 HRASP01112 189 aa14.22□□□□□ -0.13
COL1A1-206ENST00000485870 GNRHRP30968 328 aa14.22□□□□□ -0.13
COL1A1-206ENST00000485870 SPCS2Q15005 226 aa14.22□□□□□ -0.13
COL1A1-206ENST00000485870 PUSL1Q8N0Z8 303 aaKnown RBP14.22□□□□□ -0.13
COL1A1-206ENST00000485870 DLX4Q92988 240 aaPredicted RBP14.22□□□□□ -0.13
COL1A1-206ENST00000485870 MOB3AQ96BX8 217 aa14.22□□□□□ -0.13
COL1A1-206ENST00000485870 TINAGL1Q9GZM7 467 aaPredicted RBP14.22□□□□□ -0.13
COL1A1-206ENST00000485870 FXYD6Q9H0Q3 95 aa14.22□□□□□ -0.13
COL1A1-206ENST00000485870 EXTL2Q9UBQ6 330 aa14.22□□□□□ -0.13
COL1A1-206ENST00000485870 OVOL1O14753 267 aa14.21□□□□□ -0.13
COL1A1-206ENST00000485870 HSPB1P04792 205 aaKnown RBP14.21□□□□□ -0.13
COL1A1-206ENST00000485870 OR9G9P0C7N8 305 aa14.21□□□□□ -0.13
COL1A1-206ENST00000485870 RCVRNP35243 200 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms