RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 OR2A4O95047 310 aa6.57□□□□□ -1.36
SF3A1-208ENST00000485618 NDUFA3O95167 84 aa6.57□□□□□ -1.36
SF3A1-208ENST00000485618 IGLV2-14P01704 120 aa6.57□□□□□ -1.36
SF3A1-208ENST00000485618 IGHG2P01859 326 aa6.57□□□□□ -1.36
SF3A1-208ENST00000485618 IGKV1-16P04430 117 aa6.57□□□□□ -1.36
SF3A1-208ENST00000485618 VSIG10L2P0DP72 767 aa6.57□□□□□ -1.36
SF3A1-208ENST00000485618 MDKP21741 143 aaPredicted RBP6.57□□□□□ -1.36
SF3A1-208ENST00000485618 VDAC1P21796 283 aa6.57□□□□□ -1.36
SF3A1-208ENST00000485618 MAS1LP35410 378 aa6.57□□□□□ -1.36
SF3A1-208ENST00000485618 PIGPP57054 158 aa6.57□□□□□ -1.36
SF3A1-208ENST00000485618 SRPXP78539 464 aa6.57□□□□□ -1.36
SF3A1-208ENST00000485618 RELBQ01201 579 aa6.57□□□□□ -1.36
SF3A1-208ENST00000485618 DHODHQ02127 395 aa6.57□□□□□ -1.36
SF3A1-208ENST00000485618 KLF9Q13886 244 aaPredicted RBP6.57□□□□□ -1.36
SF3A1-208ENST00000485618 TBC1D26Q86UD7 250 aa6.57□□□□□ -1.36
SF3A1-208ENST00000485618 SGPP2Q8IWX5 399 aa6.57□□□□□ -1.36
SF3A1-208ENST00000485618 MRPL41Q8IXM3 137 aaKnown RBP6.57□□□□□ -1.36
SF3A1-208ENST00000485618 MMD2Q8IY49 270 aa6.57□□□□□ -1.36
SF3A1-208ENST00000485618 FAM71E2Q8N5Q1 922 aa6.57□□□□□ -1.36
SF3A1-208ENST00000485618 DMBX1Q8NFW5 382 aa6.57□□□□□ -1.36
SF3A1-208ENST00000485618 OR4X2Q8NGF9 303 aa6.57□□□□□ -1.36
SF3A1-208ENST00000485618 OR13C8Q8NGS7 320 aa6.57□□□□□ -1.36
SF3A1-208ENST00000485618 ABHD5Q8WTS1 349 aa6.57□□□□□ -1.36
SF3A1-208ENST00000485618 RHOVQ96L33 236 aa6.57□□□□□ -1.36
SF3A1-208ENST00000485618 TMEM68Q96MH6 324 aa6.57□□□□□ -1.36
SF3A1-208ENST00000485618 OR2A7Q96R45 310 aa6.57□□□□□ -1.36
SF3A1-208ENST00000485618 TSC22D3Q99576 134 aa6.57□□□□□ -1.36
SF3A1-208ENST00000485618 ZNF747Q9BV97 191 aa6.57□□□□□ -1.36
SF3A1-208ENST00000485618 ZNF702PQ9H963 129 aa6.57□□□□□ -1.36
SF3A1-208ENST00000485618 HRASLSQ9HDD0 168 aa6.57□□□□□ -1.36
SF3A1-208ENST00000485618 SLC2A9Q9NRM0 540 aa6.57□□□□□ -1.36
SF3A1-208ENST00000485618 FKBP11Q9NYL4 201 aa6.57□□□□□ -1.36
SF3A1-208ENST00000485618 COMMD9Q9P000 198 aa6.57□□□□□ -1.36
SF3A1-208ENST00000485618 ZNF580Q9UK33 172 aa6.57□□□□□ -1.36
SF3A1-208ENST00000485618 C3orf85A0A1B0GTC6 90 aa6.56□□□□□ -1.36
SF3A1-208ENST00000485618 PSMB11A5LHX3 300 aa6.56□□□□□ -1.36
SF3A1-208ENST00000485618 LINC00473A8K010 186 aa6.56□□□□□ -1.36
SF3A1-208ENST00000485618 CYB5BO43169 146 aa6.56□□□□□ -1.36
SF3A1-208ENST00000485618 OPN1MWP04001 364 aa6.56□□□□□ -1.36
SF3A1-208ENST00000485618 RLN1P04808 185 aa6.56□□□□□ -1.36
SF3A1-208ENST00000485618 IGF1P05019 195 aa6.56□□□□□ -1.36
SF3A1-208ENST00000485618 FGF2P09038 288 aa6.56□□□□□ -1.36
SF3A1-208ENST00000485618 OPN1MW2P0DN77 364 aa6.56□□□□□ -1.36
SF3A1-208ENST00000485618 OPN1MW3P0DN78 364 aa6.56□□□□□ -1.36
SF3A1-208ENST00000485618 IL7P13232 177 aa6.56□□□□□ -1.36
SF3A1-208ENST00000485618 RAB25P57735 213 aa6.56□□□□□ -1.36
SF3A1-208ENST00000485618 PROK1P58294 105 aa6.56□□□□□ -1.36
SF3A1-208ENST00000485618 DEFA1P59665 94 aa6.56□□□□□ -1.36
SF3A1-208ENST00000485618 DEFA3P59666 94 aa6.56□□□□□ -1.36
SF3A1-208ENST00000485618 EIF4EBP1Q13541 118 aaPredicted RBP6.56□□□□□ -1.36
SF3A1-208ENST00000485618 RBMS2Q15434 407 aaKnown RBP6.56□□□□□ -1.36
SF3A1-208ENST00000485618 OR2B11Q5JQS5 317 aa6.56□□□□□ -1.36
SF3A1-208ENST00000485618 PRR31Q5SQ13 230 aa6.56□□□□□ -1.36
SF3A1-208ENST00000485618 TEX38Q6PEX7 206 aa6.56□□□□□ -1.36
SF3A1-208ENST00000485618 TMEM65Q6PI78 240 aa6.56□□□□□ -1.36
SF3A1-208ENST00000485618 SLC25A42Q86VD7 318 aa6.56□□□□□ -1.36
SF3A1-208ENST00000485618 CADM3Q8N126 398 aa6.56□□□□□ -1.36
SF3A1-208ENST00000485618 KLHDC1Q8N7A1 406 aa6.56□□□□□ -1.36
SF3A1-208ENST00000485618 OR4D10Q8NGI6 311 aa6.56□□□□□ -1.36
SF3A1-208ENST00000485618 MARCH1Q8TCQ1 289 aa6.56□□□□□ -1.36
SF3A1-208ENST00000485618 TRIM63Q969Q1 353 aa6.56□□□□□ -1.36
SF3A1-208ENST00000485618 RRNAD1Q96FB5 475 aaKnown RBP6.56□□□□□ -1.36
SF3A1-208ENST00000485618 SPIN2AQ99865 258 aa6.56□□□□□ -1.36
SF3A1-208ENST00000485618 SPIN2BQ9BPZ2 258 aa6.56□□□□□ -1.36
SF3A1-208ENST00000485618 FXYD6Q9H0Q3 95 aa6.56□□□□□ -1.36
SF3A1-208ENST00000485618 OR51J1Q9H342 316 aa6.56□□□□□ -1.36
SF3A1-208ENST00000485618 FBXL15Q9H469 300 aa6.56□□□□□ -1.36
SF3A1-208ENST00000485618 AKIP1Q9NQ31 210 aa6.56□□□□□ -1.36
SF3A1-208ENST00000485618 SIGLEC9Q9Y336 463 aa6.56□□□□□ -1.36
SF3A1-208ENST00000485618 TENM1Q9UKZ4 2725 aa6.55□□□□□ -1.36
SF3A1-208ENST00000485618 H0Y980 276 aa6.55□□□□□ -1.36
SF3A1-208ENST00000485618 FBXO24O75426 580 aa6.55□□□□□ -1.36
SF3A1-208ENST00000485618 DHFRP00374 187 aa6.55□□□□□ -1.36
SF3A1-208ENST00000485618 AMY1AP04745 511 aa6.55□□□□□ -1.36
SF3A1-208ENST00000485618 ZNF735P0CB33 412 aa6.55□□□□□ -1.36
SF3A1-208ENST00000485618 LPAR6P43657 344 aa6.55□□□□□ -1.36
SF3A1-208ENST00000485618 LINC00205P59089 165 aa6.55□□□□□ -1.36
SF3A1-208ENST00000485618 UBE2MP61081 183 aaKnown RBP6.55□□□□□ -1.36
SF3A1-208ENST00000485618 GNB1P62873 340 aa6.55□□□□□ -1.36
SF3A1-208ENST00000485618 RPL30P62888 115 aaKnown RBP6.55□□□□□ -1.36
SF3A1-208ENST00000485618 CX3CL1P78423 397 aa6.55□□□□□ -1.36
SF3A1-208ENST00000485618 FXYD3Q14802 87 aa6.55□□□□□ -1.36
SF3A1-208ENST00000485618 PRSS8Q16651 343 aa6.55□□□□□ -1.36
SF3A1-208ENST00000485618 TRIM16LQ309B1 348 aa6.55□□□□□ -1.36
SF3A1-208ENST00000485618 H2BFWTQ7Z2G1 175 aa6.55□□□□□ -1.36
SF3A1-208ENST00000485618 OR5AU1Q8NGC0 362 aa6.55□□□□□ -1.36
SF3A1-208ENST00000485618 RNASE11Q8TAA1 199 aaKnown RBP6.55□□□□□ -1.36
SF3A1-208ENST00000485618 RITA1Q96K30 269 aa6.55□□□□□ -1.36
SF3A1-208ENST00000485618 CLCC1Q96S66 551 aa6.55□□□□□ -1.36
SF3A1-208ENST00000485618 PHB2Q99623 299 aa6.55□□□□□ -1.36
SF3A1-208ENST00000485618 COMMD5Q9GZQ3 224 aa6.55□□□□□ -1.36
SF3A1-208ENST00000485618 GPR132Q9UNW8 380 aa6.55□□□□□ -1.36
SF3A1-208ENST00000485618 TRAV41A0A0B4J266 112 aa6.54□□□□□ -1.36
SF3A1-208ENST00000485618 LINC00854A0A1B0GVQ3 168 aa6.54□□□□□ -1.36
SF3A1-208ENST00000485618 M0QZ24 198 aa6.54□□□□□ -1.36
SF3A1-208ENST00000485618 KRASP01116 189 aa6.54□□□□□ -1.36
SF3A1-208ENST00000485618 AKR1C4P17516 323 aa6.54□□□□□ -1.36
SF3A1-208ENST00000485618 PI3P19957 117 aa6.54□□□□□ -1.36
SF3A1-208ENST00000485618 SLC6A1P30531 599 aa6.54□□□□□ -1.36
SF3A1-208ENST00000485618 RPL8P62917 257 aaKnown RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms