RNA–Protein interactions for RNA: ENST00000485140.1

VPS50-217, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-217ENST00000485140 SLCO1A2P46721 670 aa0.49□□□□□ -2.33
VPS50-217ENST00000485140 HAAOP46952 286 aa0.49□□□□□ -2.33
VPS50-217ENST00000485140 SLAMF1Q13291 335 aa0.49□□□□□ -2.33
VPS50-217ENST00000485140 ANGPT1Q15389 498 aa0.49□□□□□ -2.33
VPS50-217ENST00000485140 MOGQ16653 247 aa0.49□□□□□ -2.33
VPS50-217ENST00000485140 PLPPR5Q32ZL2 321 aa0.49□□□□□ -2.33
VPS50-217ENST00000485140 AADACL4Q5VUY2 407 aa0.49□□□□□ -2.33
VPS50-217ENST00000485140 OR10D3Q8NH80 312 aa0.49□□□□□ -2.33
VPS50-217ENST00000485140 C19orf60Q96EN9 201 aa0.49□□□□□ -2.33
VPS50-217ENST00000485140 MRPL57Q9BQC6 102 aaKnown RBP0.49□□□□□ -2.33
VPS50-217ENST00000485140 TMEM109Q9BVC6 243 aa0.49□□□□□ -2.33
VPS50-217ENST00000485140 CD300AQ9UGN4 299 aa0.49□□□□□ -2.33
VPS50-217ENST00000485140 THSD7AQ9UPZ6 1657 aa0.49□□□□□ -2.33
VPS50-217ENST00000485140 LRPPRCP42704 1394 aaKnown RBP0.48□□□□□ -2.33
VPS50-217ENST00000485140 TMEM94Q12767 1356 aa0.48□□□□□ -2.33
VPS50-217ENST00000485140 BAZ2BQ9UIF8 2168 aaKnown RBP0.48□□□□□ -2.33
VPS50-217ENST00000485140 A0A0D9SEW6 157 aa0.48□□□□□ -2.33
VPS50-217ENST00000485140 MEIS3P1A6NDR6 274 aa0.48□□□□□ -2.33
VPS50-217ENST00000485140 GOLGA6L10A6NI86 522 aa0.48□□□□□ -2.33
VPS50-217ENST00000485140 C9JCJ5 164 aa0.48□□□□□ -2.33
VPS50-217ENST00000485140 H3BT86 120 aa0.48□□□□□ -2.33
VPS50-217ENST00000485140 ATP6V1G2O95670 118 aa0.48□□□□□ -2.33
VPS50-217ENST00000485140 LGALS1P09382 135 aaKnown RBP0.48□□□□□ -2.33
VPS50-217ENST00000485140 TRGC1P0CF51 173 aa0.48□□□□□ -2.33
VPS50-217ENST00000485140 AQP4P55087 323 aa0.48□□□□□ -2.33
VPS50-217ENST00000485140 RAB14P61106 215 aa0.48□□□□□ -2.33
VPS50-217ENST00000485140 CDK10Q15131 360 aa0.48□□□□□ -2.33
VPS50-217ENST00000485140 ZNHIT3Q15649 155 aaPredicted RBP0.48□□□□□ -2.33
VPS50-217ENST00000485140 NDUFA5Q16718 116 aa0.48□□□□□ -2.33
VPS50-217ENST00000485140 RPP25LQ8N5L8 163 aaKnown RBP0.48□□□□□ -2.33
VPS50-217ENST00000485140 SPERTQ8NA61 448 aa0.48□□□□□ -2.33
VPS50-217ENST00000485140 PPCDCQ96CD2 204 aa0.48□□□□□ -2.33
VPS50-217ENST00000485140 TIPINQ9BVW5 301 aa0.48□□□□□ -2.33
VPS50-217ENST00000485140 TTTY13Q9BZ97 58 aa0.48□□□□□ -2.33
VPS50-217ENST00000485140 CHST6Q9GZX3 395 aa0.48□□□□□ -2.33
VPS50-217ENST00000485140 HES4Q9HCC6 221 aa0.48□□□□□ -2.33
VPS50-217ENST00000485140 XAGE1AQ9HD64 81 aa0.48□□□□□ -2.33
VPS50-217ENST00000485140 POLEQ07864 2286 aa0.48□□□□□ -2.33
VPS50-217ENST00000485140 ARFGEF3Q5TH69 2177 aa0.47□□□□□ -2.33
VPS50-217ENST00000485140 WDR90Q96KV7 1748 aa0.47□□□□□ -2.33
VPS50-217ENST00000485140 A0A1W2PP64 1363 aa0.47□□□□□ -2.33
VPS50-217ENST00000485140 FLT4P35916 1363 aa0.47□□□□□ -2.33
VPS50-217ENST00000485140 CHD5Q8TDI0 1954 aa0.47□□□□□ -2.33
VPS50-217ENST00000485140 K7ERQ8 282 aa0.47□□□□□ -2.33
VPS50-217ENST00000485140 YKT6O15498 198 aa0.47□□□□□ -2.33
VPS50-217ENST00000485140 MSNP26038 577 aaKnown RBP0.47□□□□□ -2.33
VPS50-217ENST00000485140 CD40LGP29965 261 aa0.47□□□□□ -2.33
VPS50-217ENST00000485140 GRPRP30550 384 aa0.47□□□□□ -2.33
VPS50-217ENST00000485140 RPL28P46779 137 aaKnown RBP0.47□□□□□ -2.33
VPS50-217ENST00000485140 ETV1P50549 477 aa0.47□□□□□ -2.33
VPS50-217ENST00000485140 CTAG1AP78358 180 aa0.47□□□□□ -2.33
VPS50-217ENST00000485140 HLA-DRB3P79483 266 aa0.47□□□□□ -2.33
VPS50-217ENST00000485140 HLA-DRB5Q30154 266 aa0.47□□□□□ -2.33
VPS50-217ENST00000485140 FAM173BQ6P4H8 233 aa0.47□□□□□ -2.33
VPS50-217ENST00000485140 RASSF6Q6ZTQ3 369 aa0.47□□□□□ -2.33
VPS50-217ENST00000485140 SPATA24Q86W54 205 aa0.47□□□□□ -2.33
VPS50-217ENST00000485140 UMODL1-AS1Q8N2C9 162 aa0.47□□□□□ -2.33
VPS50-217ENST00000485140 PACRGLQ8N7B6 248 aa0.47□□□□□ -2.33
VPS50-217ENST00000485140 OR5L1Q8NGL2 311 aa0.47□□□□□ -2.33
VPS50-217ENST00000485140 RAB2BQ8WUD1 216 aa0.47□□□□□ -2.33
VPS50-217ENST00000485140 RNASE6Q93091 150 aaKnown RBP0.47□□□□□ -2.33
VPS50-217ENST00000485140 ANKRD36BP1Q96IX9 119 aa0.47□□□□□ -2.33
VPS50-217ENST00000485140 SERPINI1Q99574 410 aa0.47□□□□□ -2.33
VPS50-217ENST00000485140 NSRP1Q9H0G5 558 aaKnown RBP0.47□□□□□ -2.33
VPS50-217ENST00000485140 SPANXB1Q9NS25 103 aaPredicted RBP0.47□□□□□ -2.33
VPS50-217ENST00000485140 NAT8Q9UHE5 227 aa0.47□□□□□ -2.33
VPS50-217ENST00000485140 REREQ9P2R6 1566 aa0.47□□□□□ -2.33
VPS50-217ENST00000485140 TECTAO75443 2155 aa0.47□□□□□ -2.33
VPS50-217ENST00000485140 MDN1Q9NU22 5596 aa0.47□□□□□ -2.33
VPS50-217ENST00000485140 SIPA1L1O43166 1804 aa0.46□□□□□ -2.34
VPS50-217ENST00000485140 TMEM269A0A1B0GVZ9 245 aa0.46□□□□□ -2.34
VPS50-217ENST00000485140 OR51F1A6NGY5 319 aa0.46□□□□□ -2.34
VPS50-217ENST00000485140 SDCBPO00560 298 aaPredicted RBP0.46□□□□□ -2.34
VPS50-217ENST00000485140 GEMIN2O14893 280 aaKnown RBP0.46□□□□□ -2.34
VPS50-217ENST00000485140 AZIN1O14977 448 aa0.46□□□□□ -2.34
VPS50-217ENST00000485140 TOX3O15405 576 aaPredicted RBP0.46□□□□□ -2.34
VPS50-217ENST00000485140 ORM1P02763 201 aa0.46□□□□□ -2.34
VPS50-217ENST00000485140 PPBPP02775 128 aa0.46□□□□□ -2.34
VPS50-217ENST00000485140 MSMBP08118 114 aa0.46□□□□□ -2.34
VPS50-217ENST00000485140 PET100P0DJ07 73 aa0.46□□□□□ -2.34
VPS50-217ENST00000485140 DDTP30046 118 aa0.46□□□□□ -2.34
VPS50-217ENST00000485140 ACSM3Q53FZ2 586 aa0.46□□□□□ -2.34
VPS50-217ENST00000485140 GPHB5Q86YW7 130 aa0.46□□□□□ -2.34
VPS50-217ENST00000485140 DYNAPQ8N1N2 210 aa0.46□□□□□ -2.34
VPS50-217ENST00000485140 Q8N2B8 174 aa0.46□□□□□ -2.34
VPS50-217ENST00000485140 TBC1D19Q8N5T2 526 aa0.46□□□□□ -2.34
VPS50-217ENST00000485140 C12orf29Q8N999 325 aa0.46□□□□□ -2.34
VPS50-217ENST00000485140 OR8B3Q8NGG8 313 aa0.46□□□□□ -2.34
VPS50-217ENST00000485140 ACOT12Q8WYK0 555 aa0.46□□□□□ -2.34
VPS50-217ENST00000485140 TESCQ96BS2 214 aa0.46□□□□□ -2.34
VPS50-217ENST00000485140 OR52A5Q9H2C5 316 aa0.46□□□□□ -2.34
VPS50-217ENST00000485140 C22orf24Q9Y442 160 aa0.46□□□□□ -2.34
VPS50-217ENST00000485140 RBM7Q9Y580 266 aaKnown RBP0.46□□□□□ -2.34
VPS50-217ENST00000485140 RIMS2Q9UQ26 1411 aa0.46□□□□□ -2.34
VPS50-217ENST00000485140 HEATR5BQ9P2D3 2071 aa0.45□□□□□ -2.34
VPS50-217ENST00000485140 ABCC12Q96J65 1359 aa0.45□□□□□ -2.34
VPS50-217ENST00000485140 EIF4G1Q04637 1599 aaKnown RBP0.45□□□□□ -2.34
VPS50-217ENST00000485140 PTPRSQ13332 1948 aa0.45□□□□□ -2.34
VPS50-217ENST00000485140 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.45□□□□□ -2.34
VPS50-217ENST00000485140 FTCDNL1E5RQL4 147 aa0.45□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms