RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 DGCR14Q96DF8 476 aaKnown RBP12.45□□□□□ -0.42
UPF3A-208ENST00000484246 OR4F4Q96R69 305 aa12.45□□□□□ -0.42
UPF3A-208ENST00000484246 NUBP2Q9Y5Y2 271 aa12.45□□□□□ -0.42
UPF3A-208ENST00000484246 M0QYG6 137 aa12.44□□□□□ -0.42
UPF3A-208ENST00000484246 GPR31O00270 319 aa12.44□□□□□ -0.42
UPF3A-208ENST00000484246 WIPF1O43516 503 aa12.44□□□□□ -0.42
UPF3A-208ENST00000484246 SAA1P0DJI8 122 aaPredicted RBP12.44□□□□□ -0.42
UPF3A-208ENST00000484246 PTBP1P26599 531 aaKnown RBP eCLIP12.44□□□□□ -0.42
UPF3A-208ENST00000484246 TSPAN5P62079 268 aa12.44□□□□□ -0.42
UPF3A-208ENST00000484246 PRSS8Q16651 343 aa12.44□□□□□ -0.42
UPF3A-208ENST00000484246 AKIRIN2Q53H80 203 aa12.44□□□□□ -0.42
UPF3A-208ENST00000484246 RNASE12Q5GAN4 147 aaKnown RBP12.44□□□□□ -0.42
UPF3A-208ENST00000484246 CXorf66Q5JRM2 361 aaPredicted RBP12.44□□□□□ -0.42
UPF3A-208ENST00000484246 HIST2H2BDQ6DRA6 164 aa12.44□□□□□ -0.42
UPF3A-208ENST00000484246 CMTM1Q8IZ96 169 aa12.44□□□□□ -0.42
UPF3A-208ENST00000484246 VSTM2AQ8TAG5 236 aa12.44□□□□□ -0.42
UPF3A-208ENST00000484246 RSRP1Q9BUV0 290 aa12.44□□□□□ -0.42
UPF3A-208ENST00000484246 TINAGL1Q9GZM7 467 aaPredicted RBP12.44□□□□□ -0.42
UPF3A-208ENST00000484246 FAM212BQ9NTI7 297 aaPredicted RBP12.44□□□□□ -0.42
UPF3A-208ENST00000484246 MGAM2Q2M2H8 2515 aa12.43□□□□□ -0.42
UPF3A-208ENST00000484246 FABP12A6NFH5 140 aa12.43□□□□□ -0.42
UPF3A-208ENST00000484246 G3V318 75 aa12.43□□□□□ -0.42
UPF3A-208ENST00000484246 ARPC1BO15143 372 aaKnown RBP12.43□□□□□ -0.42
UPF3A-208ENST00000484246 TNFSF12O43508 249 aa12.43□□□□□ -0.42
UPF3A-208ENST00000484246 PGLYRP1O75594 196 aaPredicted RBP12.43□□□□□ -0.42
UPF3A-208ENST00000484246 IFNA6P05013 189 aa12.43□□□□□ -0.42
UPF3A-208ENST00000484246 FGF2P09038 288 aa12.43□□□□□ -0.42
UPF3A-208ENST00000484246 ETV6P41212 452 aa12.43□□□□□ -0.42
UPF3A-208ENST00000484246 TMEM267Q0VDI3 215 aaPredicted RBP12.43□□□□□ -0.42
UPF3A-208ENST00000484246 MEF2DQ14814 521 aa12.43□□□□□ -0.42
UPF3A-208ENST00000484246 NSUN5P1Q3KNT7 163 aa12.43□□□□□ -0.42
UPF3A-208ENST00000484246 OR2B11Q5JQS5 317 aa12.43□□□□□ -0.42
UPF3A-208ENST00000484246 STEAP1BQ6NZ63 245 aa12.43□□□□□ -0.42
UPF3A-208ENST00000484246 CCDC190Q86UF4 302 aa12.43□□□□□ -0.42
UPF3A-208ENST00000484246 SLC38A6Q8IZM9 456 aa12.43□□□□□ -0.42
UPF3A-208ENST00000484246 SPAG16Q8N0X2 631 aa12.43□□□□□ -0.42
UPF3A-208ENST00000484246 PUSL1Q8N0Z8 303 aaKnown RBP12.43□□□□□ -0.42
UPF3A-208ENST00000484246 CADM3Q8N126 398 aa12.43□□□□□ -0.42
UPF3A-208ENST00000484246 TMEM68Q96MH6 324 aa12.43□□□□□ -0.42
UPF3A-208ENST00000484246 GPHA2Q96T91 129 aa12.43□□□□□ -0.42
UPF3A-208ENST00000484246 AIFM2Q9BRQ8 373 aa12.43□□□□□ -0.42
UPF3A-208ENST00000484246 PLEKHA2Q9HB19 425 aa12.43□□□□□ -0.42
UPF3A-208ENST00000484246 COMMD9Q9P000 198 aa12.43□□□□□ -0.42
UPF3A-208ENST00000484246 FOXA2Q9Y261 457 aaPredicted RBP12.43□□□□□ -0.42
UPF3A-208ENST00000484246 V9GYH0 126 aa12.43□□□□□ -0.42
UPF3A-208ENST00000484246 DPPA5A6NC42 116 aa12.42□□□□□ -0.42
UPF3A-208ENST00000484246 RAMP3O60896 148 aa12.42□□□□□ -0.42
UPF3A-208ENST00000484246 BRI3O95415 125 aa12.42□□□□□ -0.42
UPF3A-208ENST00000484246 RAB3DO95716 219 aa12.42□□□□□ -0.42
UPF3A-208ENST00000484246 HRASP01112 189 aa12.42□□□□□ -0.42
UPF3A-208ENST00000484246 S100A5P33763 92 aa12.42□□□□□ -0.42
UPF3A-208ENST00000484246 CDX1P47902 265 aaPredicted RBP12.42□□□□□ -0.42
UPF3A-208ENST00000484246 TAS2R31P59538 309 aa12.42□□□□□ -0.42
UPF3A-208ENST00000484246 PJVKQ0ZLH3 352 aa12.42□□□□□ -0.42
UPF3A-208ENST00000484246 FXYD3Q14802 87 aa12.42□□□□□ -0.42
UPF3A-208ENST00000484246 FOXB2Q5VYV0 432 aa12.42□□□□□ -0.42
UPF3A-208ENST00000484246 MMD2Q8IY49 270 aa12.42□□□□□ -0.42
UPF3A-208ENST00000484246 POC5Q8NA72 575 aa12.42□□□□□ -0.42
UPF3A-208ENST00000484246 OR5M8Q8NGP6 311 aa12.42□□□□□ -0.42
UPF3A-208ENST00000484246 TMEM167AQ8TBQ9 72 aa12.42□□□□□ -0.42
UPF3A-208ENST00000484246 ZNF486Q96H40 463 aaPredicted RBP12.42□□□□□ -0.42
UPF3A-208ENST00000484246 RHOVQ96L33 236 aa12.42□□□□□ -0.42
UPF3A-208ENST00000484246 WSB1Q9Y6I7 421 aa12.42□□□□□ -0.42
UPF3A-208ENST00000484246 TET2Q6N021 2002 aaPredicted RBP12.42□□□□□ -0.42
UPF3A-208ENST00000484246 ANKRD20A5PA0PJZ0 165 aa12.41□□□□□ -0.42
UPF3A-208ENST00000484246 SOX15O60248 233 aa12.41□□□□□ -0.42
UPF3A-208ENST00000484246 HPRT1P00492 218 aa12.41□□□□□ -0.42
UPF3A-208ENST00000484246 ZNF735P0CB33 412 aa12.41□□□□□ -0.42
UPF3A-208ENST00000484246 F2RP25116 425 aa12.41□□□□□ -0.42
UPF3A-208ENST00000484246 S100GP29377 79 aa12.41□□□□□ -0.42
UPF3A-208ENST00000484246 RND3P61587 244 aa12.41□□□□□ -0.42
UPF3A-208ENST00000484246 ECSCRQ19T08 205 aa12.41□□□□□ -0.42
UPF3A-208ENST00000484246 OR4D10Q8NGI6 311 aa12.41□□□□□ -0.42
UPF3A-208ENST00000484246 OR51H1Q8NH63 302 aa12.41□□□□□ -0.42
UPF3A-208ENST00000484246 OR4A5Q8NH83 315 aa12.41□□□□□ -0.42
UPF3A-208ENST00000484246 TRIM63Q969Q1 353 aa12.41□□□□□ -0.42
UPF3A-208ENST00000484246 R3HDM4Q96D70 268 aa12.41□□□□□ -0.42
UPF3A-208ENST00000484246 CLCC1Q96S66 551 aa12.41□□□□□ -0.42
UPF3A-208ENST00000484246 ZNF430Q9H8G1 570 aaPredicted RBP12.41□□□□□ -0.42
UPF3A-208ENST00000484246 SLC2A8Q9NY64 477 aa12.41□□□□□ -0.42
UPF3A-208ENST00000484246 BET1LQ9NYM9 111 aa12.41□□□□□ -0.42
UPF3A-208ENST00000484246 H3BUA1 57 aa12.4□□□□□ -0.42
UPF3A-208ENST00000484246 KBTBD11O94819 623 aa12.4□□□□□ -0.42
UPF3A-208ENST00000484246 OR2A4O95047 310 aa12.4□□□□□ -0.42
UPF3A-208ENST00000484246 RLN1P04808 185 aa12.4□□□□□ -0.42
UPF3A-208ENST00000484246 RPLP1P05386 114 aaKnown RBP12.4□□□□□ -0.42
UPF3A-208ENST00000484246 IL6RP08887 468 aaPredicted RBP12.4□□□□□ -0.42
UPF3A-208ENST00000484246 AKAIN1P0CW23 69 aa12.4□□□□□ -0.42
UPF3A-208ENST00000484246 MAS1LP35410 378 aa12.4□□□□□ -0.42
UPF3A-208ENST00000484246 ECI1P42126 302 aa12.4□□□□□ -0.42
UPF3A-208ENST00000484246 KIAA0141Q14154 515 aaPredicted RBP12.4□□□□□ -0.42
UPF3A-208ENST00000484246 ZNF79Q15937 498 aa12.4□□□□□ -0.42
UPF3A-208ENST00000484246 KHDC1LQ5JSQ8 128 aa12.4□□□□□ -0.42
UPF3A-208ENST00000484246 IDO2Q6ZQW0 420 aa12.4□□□□□ -0.42
UPF3A-208ENST00000484246 ZNF695Q8IW36 515 aa12.4□□□□□ -0.42
UPF3A-208ENST00000484246 TERB2Q8NHR7 220 aa12.4□□□□□ -0.42
UPF3A-208ENST00000484246 GRPEL2Q8TAA5 225 aa12.4□□□□□ -0.42
UPF3A-208ENST00000484246 FAM110DQ8TAY7 271 aaPredicted RBP12.4□□□□□ -0.42
UPF3A-208ENST00000484246 OR2A7Q96R45 310 aa12.4□□□□□ -0.42
UPF3A-208ENST00000484246 SLC2A9Q9NRM0 540 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms