RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 DEFB135Q30KP9 77 aa9.54□□□□□ -0.88
UBR4-213ENST00000483922 RBM48Q5RL73 367 aaKnown RBP9.54□□□□□ -0.88
UBR4-213ENST00000483922 CLEC19AQ6UXS0 136 aa9.54□□□□□ -0.88
UBR4-213ENST00000483922 SLC16A13Q7RTY0 426 aa9.54□□□□□ -0.88
UBR4-213ENST00000483922 OR4A4PQ8NGN8 299 aa9.54□□□□□ -0.88
UBR4-213ENST00000483922 MAFIPQ8WZ33 124 aa9.54□□□□□ -0.88
UBR4-213ENST00000483922 PHYHIPQ92561 330 aa9.54□□□□□ -0.88
UBR4-213ENST00000483922 S100A14Q9HCY8 104 aa9.54□□□□□ -0.88
UBR4-213ENST00000483922 C12orf4Q9NQ89 552 aa9.54□□□□□ -0.88
UBR4-213ENST00000483922 SMPD3Q9NY59 655 aaPredicted RBP9.54□□□□□ -0.88
UBR4-213ENST00000483922 FBXL7Q9UJT9 491 aa9.54□□□□□ -0.88
UBR4-213ENST00000483922 A8MWP6 167 aa9.53□□□□□ -0.88
UBR4-213ENST00000483922 BET1O15155 118 aa9.53□□□□□ -0.88
UBR4-213ENST00000483922 MPPED1O15442 326 aa9.53□□□□□ -0.88
UBR4-213ENST00000483922 FABP7O15540 132 aa9.53□□□□□ -0.88
UBR4-213ENST00000483922 S1PR2O95136 353 aa9.53□□□□□ -0.88
UBR4-213ENST00000483922 C8orf88P0DMB2 117 aa9.53□□□□□ -0.88
UBR4-213ENST00000483922 ATF4P18848 351 aaPredicted RBP9.53□□□□□ -0.88
UBR4-213ENST00000483922 BRWD1-AS2P59051 145 aa9.53□□□□□ -0.88
UBR4-213ENST00000483922 KLK9Q2XQG4 91 aa9.53□□□□□ -0.88
UBR4-213ENST00000483922 BTNL8Q6UX41 500 aa9.53□□□□□ -0.88
UBR4-213ENST00000483922 Q6ZWC4 215 aa9.53□□□□□ -0.88
UBR4-213ENST00000483922 VKORC1L1Q8N0U8 176 aa9.53□□□□□ -0.88
UBR4-213ENST00000483922 PQLC1Q8N2U9 271 aa9.53□□□□□ -0.88
UBR4-213ENST00000483922 ZNF555Q8NEP9 628 aa9.53□□□□□ -0.88
UBR4-213ENST00000483922 PHLDA1Q8WV24 401 aaPredicted RBP9.53□□□□□ -0.88
UBR4-213ENST00000483922 THRSPQ92748 146 aa9.53□□□□□ -0.88
UBR4-213ENST00000483922 RNF183Q96D59 192 aa9.53□□□□□ -0.88
UBR4-213ENST00000483922 CMSS1Q9BQ75 279 aaKnown RBP9.53□□□□□ -0.88
UBR4-213ENST00000483922 CABLES2Q9BTV7 478 aa9.53□□□□□ -0.88
UBR4-213ENST00000483922 PSORS1C1Q9UIG5 152 aa9.53□□□□□ -0.88
UBR4-213ENST00000483922 KLK9Q9UKQ9 250 aa9.53□□□□□ -0.88
UBR4-213ENST00000483922 MGAT4AQ9UM21 535 aa9.53□□□□□ -0.88
UBR4-213ENST00000483922 IGKV1D-8A0A087WSZ0 117 aa9.52□□□□□ -0.89
UBR4-213ENST00000483922 ZNF320A2RRD8 509 aa9.52□□□□□ -0.89
UBR4-213ENST00000483922 CGB1A6NKQ9 187 aa9.52□□□□□ -0.89
UBR4-213ENST00000483922 IGLV2-14P01704 120 aa9.52□□□□□ -0.89
UBR4-213ENST00000483922 UCHL1P09936 223 aa9.52□□□□□ -0.89
UBR4-213ENST00000483922 MYOD1P15172 320 aa9.52□□□□□ -0.89
UBR4-213ENST00000483922 MAPK3P27361 379 aaPredicted RBP9.52□□□□□ -0.89
UBR4-213ENST00000483922 BMI1P35226 326 aa9.52□□□□□ -0.89
UBR4-213ENST00000483922 CLDN12P56749 244 aa9.52□□□□□ -0.89
UBR4-213ENST00000483922 RPL30P62888 115 aaKnown RBP9.52□□□□□ -0.89
UBR4-213ENST00000483922 VMA21Q3ZAQ7 101 aa9.52□□□□□ -0.89
UBR4-213ENST00000483922 TMEM91Q6ZNR0 172 aa9.52□□□□□ -0.89
UBR4-213ENST00000483922 OR6M1Q8NGM8 313 aa9.52□□□□□ -0.89
UBR4-213ENST00000483922 CYGBQ8WWM9 190 aa9.52□□□□□ -0.89
UBR4-213ENST00000483922 FKBP14Q9NWM8 211 aa9.52□□□□□ -0.89
UBR4-213ENST00000483922 UBQLN2Q9UHD9 624 aa9.52□□□□□ -0.89
UBR4-213ENST00000483922 KLK5Q9Y337 293 aaPredicted RBP9.52□□□□□ -0.89
UBR4-213ENST00000483922 CRYGCP07315 174 aa9.51□□□□□ -0.89
UBR4-213ENST00000483922 FCGR3AP08637 254 aa9.51□□□□□ -0.89
UBR4-213ENST00000483922 GNAO1P09471 354 aa9.51□□□□□ -0.89
UBR4-213ENST00000483922 AREGP15514 252 aa9.51□□□□□ -0.89
UBR4-213ENST00000483922 ARL3P36405 182 aa9.51□□□□□ -0.89
UBR4-213ENST00000483922 SERPINB10P48595 397 aa9.51□□□□□ -0.89
UBR4-213ENST00000483922 CDK10Q15131 360 aa9.51□□□□□ -0.89
UBR4-213ENST00000483922 RTL8BQ17RB0 113 aa9.51□□□□□ -0.89
UBR4-213ENST00000483922 C2orf76Q3KRA6 126 aa9.51□□□□□ -0.89
UBR4-213ENST00000483922 HSD17B12Q53GQ0 312 aa9.51□□□□□ -0.89
UBR4-213ENST00000483922 OSR1Q8TAX0 266 aaPredicted RBP9.51□□□□□ -0.89
UBR4-213ENST00000483922 SPIN2AQ99865 258 aa9.51□□□□□ -0.89
UBR4-213ENST00000483922 SPIN2BQ9BPZ2 258 aa9.51□□□□□ -0.89
UBR4-213ENST00000483922 URM1Q9BTM9 101 aaKnown RBP9.51□□□□□ -0.89
UBR4-213ENST00000483922 PLCXD1Q9NUJ7 323 aa9.51□□□□□ -0.89
UBR4-213ENST00000483922 ZNF257Q9Y2Q1 563 aa9.51□□□□□ -0.89
UBR4-213ENST00000483922 AK6Q9Y3D8 172 aaKnown RBP9.51□□□□□ -0.89
UBR4-213ENST00000483922 MFSD2BA6NFX1 497 aa9.5□□□□□ -0.89
UBR4-213ENST00000483922 NPIPB5A8MRT5 1133 aa9.5□□□□□ -0.89
UBR4-213ENST00000483922 SLC17A2O00624 439 aa9.5□□□□□ -0.89
UBR4-213ENST00000483922 RRASP10301 218 aa9.5□□□□□ -0.89
UBR4-213ENST00000483922 FCGR2BP31994 310 aaPredicted RBP9.5□□□□□ -0.89
UBR4-213ENST00000483922 MED21Q13503 144 aa9.5□□□□□ -0.89
UBR4-213ENST00000483922 ODF3L2Q3SX64 289 aa9.5□□□□□ -0.89
UBR4-213ENST00000483922 ZNF585BQ52M93 769 aa9.5□□□□□ -0.89
UBR4-213ENST00000483922 AHSA2Q719I0 299 aa9.5□□□□□ -0.89
UBR4-213ENST00000483922 H1FOOQ8IZA3 346 aaPredicted RBP9.5□□□□□ -0.89
UBR4-213ENST00000483922 MS4A15Q8N5U1 240 aa9.5□□□□□ -0.89
UBR4-213ENST00000483922 OR10J5Q8NHC4 309 aa9.5□□□□□ -0.89
UBR4-213ENST00000483922 FBLIM1Q8WUP2 373 aa9.5□□□□□ -0.89
UBR4-213ENST00000483922 ELF5Q9UKW6 265 aaPredicted RBP9.5□□□□□ -0.89
UBR4-213ENST00000483922 LSM2Q9Y333 95 aaKnown RBP9.5□□□□□ -0.89
UBR4-213ENST00000483922 IGHV3-35A0A0C4DH35 117 aa9.49□□□□□ -0.89
UBR4-213ENST00000483922 J3QRK9 145 aa9.49□□□□□ -0.89
UBR4-213ENST00000483922 FCGR3BO75015 233 aa9.49□□□□□ -0.89
UBR4-213ENST00000483922 CLEC3BP05452 202 aa9.49□□□□□ -0.89
UBR4-213ENST00000483922 CDK1P06493 297 aa9.49□□□□□ -0.89
UBR4-213ENST00000483922 ZNF735P0CB33 412 aa9.49□□□□□ -0.89
UBR4-213ENST00000483922 CTRB1P17538 263 aa9.49□□□□□ -0.89
UBR4-213ENST00000483922 NANOS2P60321 138 aaKnown RBP9.49□□□□□ -0.89
UBR4-213ENST00000483922 FAM209BQ5JX69 171 aa9.49□□□□□ -0.89
UBR4-213ENST00000483922 TTC23Q5W5X9 447 aa9.49□□□□□ -0.89
UBR4-213ENST00000483922 CTRB2Q6GPI1 263 aa9.49□□□□□ -0.89
UBR4-213ENST00000483922 MMD2Q8IY49 270 aa9.49□□□□□ -0.89
UBR4-213ENST00000483922 PUSL1Q8N0Z8 303 aaKnown RBP9.49□□□□□ -0.89
UBR4-213ENST00000483922 OR2C3Q8N628 320 aa9.49□□□□□ -0.89
UBR4-213ENST00000483922 TMEM203Q969S6 136 aa9.49□□□□□ -0.89
UBR4-213ENST00000483922 ZNF414Q96IQ9 312 aa9.49□□□□□ -0.89
UBR4-213ENST00000483922 SLC2A9Q9NRM0 540 aa9.49□□□□□ -0.89
UBR4-213ENST00000483922 IGLV11-55A0A075B6I3 123 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms