RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 DYNLT3P51808 116 aa7.25□□□□□ -1.25
CDC42SE1-204ENST00000483763 DLX1P56177 255 aa7.25□□□□□ -1.25
CDC42SE1-204ENST00000483763 VAMP2P63027 116 aa7.25□□□□□ -1.25
CDC42SE1-204ENST00000483763 ARL16Q0P5N6 197 aa7.25□□□□□ -1.25
CDC42SE1-204ENST00000483763 SSX9Q7RTT3 188 aa7.25□□□□□ -1.25
CDC42SE1-204ENST00000483763 CLRN3Q8NCR9 226 aa7.25□□□□□ -1.25
CDC42SE1-204ENST00000483763 H1FXQ92522 213 aaKnown RBP7.25□□□□□ -1.25
CDC42SE1-204ENST00000483763 MS4A7Q9GZW8 240 aaPredicted RBP7.25□□□□□ -1.25
CDC42SE1-204ENST00000483763 LPAR3Q9UBY5 353 aa7.25□□□□□ -1.25
CDC42SE1-204ENST00000483763 SESN1Q9Y6P5 492 aa7.25□□□□□ -1.25
CDC42SE1-204ENST00000483763 UNC79Q9P2D8 2635 aa7.24□□□□□ -1.25
CDC42SE1-204ENST00000483763 DNASE2O00115 360 aaPredicted RBP7.24□□□□□ -1.25
CDC42SE1-204ENST00000483763 AGAP20933 346 aa7.24□□□□□ -1.25
CDC42SE1-204ENST00000483763 UBE2KP61086 200 aa7.24□□□□□ -1.25
CDC42SE1-204ENST00000483763 SRSF3P84103 164 aaKnown RBP7.24□□□□□ -1.25
CDC42SE1-204ENST00000483763 PRB3Q04118 309 aaPredicted RBP7.24□□□□□ -1.25
CDC42SE1-204ENST00000483763 TNFRSF9Q07011 255 aa7.24□□□□□ -1.25
CDC42SE1-204ENST00000483763 TMEM267Q0VDI3 215 aaPredicted RBP7.24□□□□□ -1.25
CDC42SE1-204ENST00000483763 SPINK9Q5DT21 86 aa7.24□□□□□ -1.25
CDC42SE1-204ENST00000483763 HSD17B13Q7Z5P4 300 aaPredicted RBP7.24□□□□□ -1.25
CDC42SE1-204ENST00000483763 HAPLN4Q86UW8 402 aa7.24□□□□□ -1.25
CDC42SE1-204ENST00000483763 STPG2Q8N412 459 aa7.24□□□□□ -1.25
CDC42SE1-204ENST00000483763 C11orf42Q8N5U0 333 aa7.24□□□□□ -1.25
CDC42SE1-204ENST00000483763 ZNF383Q8NA42 475 aa7.24□□□□□ -1.25
CDC42SE1-204ENST00000483763 ZDHHC16Q969W1 377 aa7.24□□□□□ -1.25
CDC42SE1-204ENST00000483763 COA4Q9NYJ1 87 aa7.24□□□□□ -1.25
CDC42SE1-204ENST00000483763 KAAG1Q9UBP8 84 aa7.24□□□□□ -1.25
CDC42SE1-204ENST00000483763 WSB1Q9Y6I7 421 aa7.24□□□□□ -1.25
CDC42SE1-204ENST00000483763 APCP25054 2843 aa7.24□□□□□ -1.25
CDC42SE1-204ENST00000483763 ZFHX3Q15911 3703 aa7.24□□□□□ -1.25
CDC42SE1-204ENST00000483763 TRAV3A0A0B4J244 114 aa7.24□□□□□ -1.25
CDC42SE1-204ENST00000483763 ITGB1BP1O14713 200 aa7.24□□□□□ -1.25
CDC42SE1-204ENST00000483763 RAB29O14966 203 aa7.24□□□□□ -1.25
CDC42SE1-204ENST00000483763 NDUFB3O43676 98 aa7.24□□□□□ -1.25
CDC42SE1-204ENST00000483763 CIDEAO60543 219 aa7.24□□□□□ -1.25
CDC42SE1-204ENST00000483763 H2AFB1P0C5Y9 115 aa7.24□□□□□ -1.25
CDC42SE1-204ENST00000483763 OR9G9P0C7N8 305 aa7.24□□□□□ -1.25
CDC42SE1-204ENST00000483763 METTL15P1P0C7V9 234 aa7.24□□□□□ -1.25
CDC42SE1-204ENST00000483763 SPP1P10451 314 aa7.24□□□□□ -1.25
CDC42SE1-204ENST00000483763 MMP9P14780 707 aa7.24□□□□□ -1.25
CDC42SE1-204ENST00000483763 AKR1C1Q04828 323 aa7.24□□□□□ -1.25
CDC42SE1-204ENST00000483763 LRRC10Q5BKY1 277 aa7.24□□□□□ -1.25
CDC42SE1-204ENST00000483763 AVPI1Q5T686 147 aa7.24□□□□□ -1.25
CDC42SE1-204ENST00000483763 C11orf71Q6IPW1 123 aa7.24□□□□□ -1.25
CDC42SE1-204ENST00000483763 HEPN1Q6WQI6 88 aa7.24□□□□□ -1.25
CDC42SE1-204ENST00000483763 ZNF841Q6ZN19 808 aa7.24□□□□□ -1.25
CDC42SE1-204ENST00000483763 SLC25A48Q6ZT89 311 aaKnown RBP7.24□□□□□ -1.25
CDC42SE1-204ENST00000483763 SMIM8Q96KF7 97 aa7.24□□□□□ -1.25
CDC42SE1-204ENST00000483763 ZNF714Q96N38 554 aa7.24□□□□□ -1.25
CDC42SE1-204ENST00000483763 RAB40CQ96S21 281 aa7.24□□□□□ -1.25
CDC42SE1-204ENST00000483763 GINS3Q9BRX5 216 aa7.24□□□□□ -1.25
CDC42SE1-204ENST00000483763 TAS2R3Q9NYW6 316 aa7.24□□□□□ -1.25
CDC42SE1-204ENST00000483763 HSPB7Q9UBY9 170 aa7.24□□□□□ -1.25
CDC42SE1-204ENST00000483763 TNCP24821 2201 aa7.24□□□□□ -1.25
CDC42SE1-204ENST00000483763 PIGBOS1A0A0B4J2F0 54 aa7.23□□□□□ -1.25
CDC42SE1-204ENST00000483763 IGKV1-16P04430 117 aa7.23□□□□□ -1.25
CDC42SE1-204ENST00000483763 FABP1P07148 127 aa7.23□□□□□ -1.25
CDC42SE1-204ENST00000483763 DANCRP0C864 163 aa7.23□□□□□ -1.25
CDC42SE1-204ENST00000483763 SULT1A2P50226 295 aa7.23□□□□□ -1.25
CDC42SE1-204ENST00000483763 RAB7AP51149 207 aa7.23□□□□□ -1.25
CDC42SE1-204ENST00000483763 OR2B8PP59922 312 aa7.23□□□□□ -1.25
CDC42SE1-204ENST00000483763 MRPS11P82912 194 aaKnown RBP7.23□□□□□ -1.25
CDC42SE1-204ENST00000483763 RUNX1Q01196 453 aa7.23□□□□□ -1.25
CDC42SE1-204ENST00000483763 MEF2CQ06413 473 aaPredicted RBP7.23□□□□□ -1.25
CDC42SE1-204ENST00000483763 DIAPH2-AS1Q14236 149 aa7.23□□□□□ -1.25
CDC42SE1-204ENST00000483763 H2BFWTQ7Z2G1 175 aa7.23□□□□□ -1.25
CDC42SE1-204ENST00000483763 R3HDM4Q96D70 268 aa7.23□□□□□ -1.25
CDC42SE1-204ENST00000483763 SLC25A31Q9H0C2 315 aa7.23□□□□□ -1.25
CDC42SE1-204ENST00000483763 RBKSQ9H477 322 aa7.23□□□□□ -1.25
CDC42SE1-204ENST00000483763 FAM212BQ9NTI7 297 aaPredicted RBP7.23□□□□□ -1.25
CDC42SE1-204ENST00000483763 GAB2Q9UQC2 676 aa7.23□□□□□ -1.25
CDC42SE1-204ENST00000483763 ARHGAP32A7KAX9 2087 aa7.23□□□□□ -1.25
CDC42SE1-204ENST00000483763 CELSR1Q9NYQ6 3014 aa7.23□□□□□ -1.25
CDC42SE1-204ENST00000483763 MED6O75586 246 aa7.23□□□□□ -1.25
CDC42SE1-204ENST00000483763 HPRT1P00492 218 aa7.23□□□□□ -1.25
CDC42SE1-204ENST00000483763 F12P00748 615 aaPredicted RBP7.23□□□□□ -1.25
CDC42SE1-204ENST00000483763 CT45A6P0DMU7 189 aa7.23□□□□□ -1.25
CDC42SE1-204ENST00000483763 CT45A5P0DMU8 189 aa7.23□□□□□ -1.25
CDC42SE1-204ENST00000483763 CT45A7P0DMV0 189 aa7.23□□□□□ -1.25
CDC42SE1-204ENST00000483763 PPOXP50336 477 aa7.23□□□□□ -1.25
CDC42SE1-204ENST00000483763 DLX6P56179 175 aa7.23□□□□□ -1.25
CDC42SE1-204ENST00000483763 SPANXN5Q5MJ07 72 aa7.23□□□□□ -1.25
CDC42SE1-204ENST00000483763 TCTEX1D1Q8N7M0 179 aa7.23□□□□□ -1.25
CDC42SE1-204ENST00000483763 S1PR3Q99500 378 aa7.23□□□□□ -1.25
CDC42SE1-204ENST00000483763 QTRT1Q9BXR0 403 aaKnown RBP7.23□□□□□ -1.25
CDC42SE1-204ENST00000483763 HRH4Q9H3N8 390 aa7.23□□□□□ -1.25
CDC42SE1-204ENST00000483763 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.23□□□□□ -1.25
CDC42SE1-204ENST00000483763 PSENENQ9NZ42 101 aa7.23□□□□□ -1.25
CDC42SE1-204ENST00000483763 LAMP3Q9UQV4 416 aa7.23□□□□□ -1.25
CDC42SE1-204ENST00000483763 BORCS7-ASMTA0A0B4J1R7 106 aa7.22□□□□□ -1.25
CDC42SE1-204ENST00000483763 NDUFS7O75251 213 aa7.22□□□□□ -1.25
CDC42SE1-204ENST00000483763 IGHV2-70P01814 119 aa7.22□□□□□ -1.25
CDC42SE1-204ENST00000483763 ATP6V0CP27449 155 aa7.22□□□□□ -1.25
CDC42SE1-204ENST00000483763 SULT1A1P50225 295 aa7.22□□□□□ -1.25
CDC42SE1-204ENST00000483763 RPS16P62249 146 aaKnown RBP7.22□□□□□ -1.25
CDC42SE1-204ENST00000483763 EIF5AP63241 154 aaKnown RBP7.22□□□□□ -1.25
CDC42SE1-204ENST00000483763 ZNF787Q6DD87 383 aa7.22□□□□□ -1.25
CDC42SE1-204ENST00000483763 CD300LFQ8TDQ1 290 aa7.22□□□□□ -1.25
CDC42SE1-204ENST00000483763 FAM216AQ8WUB2 273 aa7.22□□□□□ -1.25
CDC42SE1-204ENST00000483763 PSMG3-AS1Q96PY0 264 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms