RNA–Protein interactions for RNA: ENST00000482928.5

TSPAN1-208, Transcript of tetraspanin 1, humanhuman

TSL 2

Gene TSPAN1, Length 844 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-208ENST00000482928 SIRPDQ9H106 197 aa10.13□□□□□ -0.79
TSPAN1-208ENST00000482928 UNKLQ9H9P5 680 aaKnown RBP10.13□□□□□ -0.79
TSPAN1-208ENST00000482928 ZC4H2Q9NQZ6 224 aa10.13□□□□□ -0.79
TSPAN1-208ENST00000482928 DPM3Q9P2X0 92 aa10.13□□□□□ -0.79
TSPAN1-208ENST00000482928 WASHC3Q9Y3C0 194 aa10.13□□□□□ -0.79
TSPAN1-208ENST00000482928 MALRD1Q5VYJ5 2156 aa10.13□□□□□ -0.79
TSPAN1-208ENST00000482928 MARCH11A6NNE9 402 aa10.12□□□□□ -0.79
TSPAN1-208ENST00000482928 L7N2F9 121 aa10.12□□□□□ -0.79
TSPAN1-208ENST00000482928 SHOXO15266 292 aa10.12□□□□□ -0.79
TSPAN1-208ENST00000482928 ST8SIA3O43173 380 aa10.12□□□□□ -0.79
TSPAN1-208ENST00000482928 MPC2O95563 127 aa10.12□□□□□ -0.79
TSPAN1-208ENST00000482928 GATA3P23771 443 aa10.12□□□□□ -0.79
TSPAN1-208ENST00000482928 NKX2-1P43699 371 aaPredicted RBP10.12□□□□□ -0.79
TSPAN1-208ENST00000482928 LINC00205P59089 165 aa10.12□□□□□ -0.79
TSPAN1-208ENST00000482928 VAMP2P63027 116 aa10.12□□□□□ -0.79
TSPAN1-208ENST00000482928 PAX2Q02962 417 aa10.12□□□□□ -0.79
TSPAN1-208ENST00000482928 LOXL1Q08397 574 aaPredicted RBP10.12□□□□□ -0.79
TSPAN1-208ENST00000482928 NMSQ5H8A3 153 aa10.12□□□□□ -0.79
TSPAN1-208ENST00000482928 TPTE2P1Q5T6R2 138 aa10.12□□□□□ -0.79
TSPAN1-208ENST00000482928 C11orf87Q6NUJ2 197 aa10.12□□□□□ -0.79
TSPAN1-208ENST00000482928 SSX9Q7RTT3 188 aa10.12□□□□□ -0.79
TSPAN1-208ENST00000482928 INO80EQ8NBZ0 244 aaPredicted RBP10.12□□□□□ -0.79
TSPAN1-208ENST00000482928 OR4P4Q8NGL7 312 aa10.12□□□□□ -0.79
TSPAN1-208ENST00000482928 OR4A16Q8NH70 328 aa10.12□□□□□ -0.79
TSPAN1-208ENST00000482928 DDB2Q92466 427 aa10.12□□□□□ -0.79
TSPAN1-208ENST00000482928 GPR146Q96CH1 333 aa10.12□□□□□ -0.79
TSPAN1-208ENST00000482928 FLYWCH2Q96CP2 140 aaKnown RBP10.12□□□□□ -0.79
TSPAN1-208ENST00000482928 WDR89Q96FK6 387 aaPredicted RBP10.12□□□□□ -0.79
TSPAN1-208ENST00000482928 NABP2Q9BQ15 211 aa10.12□□□□□ -0.79
TSPAN1-208ENST00000482928 REG4Q9BYZ8 158 aa10.12□□□□□ -0.79
TSPAN1-208ENST00000482928 CACNG5Q9UF02 275 aa10.12□□□□□ -0.79
TSPAN1-208ENST00000482928 AUP1Q9Y679 476 aa10.12□□□□□ -0.79
TSPAN1-208ENST00000482928 AKAP6Q13023 2319 aa10.12□□□□□ -0.79
TSPAN1-208ENST00000482928 H0YJW9 148 aa10.11□□□□□ -0.79
TSPAN1-208ENST00000482928 ARPC5O15511 151 aa10.11□□□□□ -0.79
TSPAN1-208ENST00000482928 PROP1O75360 226 aa10.11□□□□□ -0.79
TSPAN1-208ENST00000482928 IGKV1-39P01597 117 aa10.11□□□□□ -0.79
TSPAN1-208ENST00000482928 IGKV1-5P01602 117 aa10.11□□□□□ -0.79
TSPAN1-208ENST00000482928 IGKV1D-39P04432 117 aa10.11□□□□□ -0.79
TSPAN1-208ENST00000482928 UBE2E1P51965 193 aa10.11□□□□□ -0.79
TSPAN1-208ENST00000482928 RPS16P62249 146 aaKnown RBP10.11□□□□□ -0.79
TSPAN1-208ENST00000482928 RAB32Q13637 225 aa10.11□□□□□ -0.79
TSPAN1-208ENST00000482928 MINOS1Q5TGZ0 78 aa10.11□□□□□ -0.79
TSPAN1-208ENST00000482928 PRSS54Q6PEW0 395 aa10.11□□□□□ -0.79
TSPAN1-208ENST00000482928 ZNF546Q86UE3 836 aa10.11□□□□□ -0.79
TSPAN1-208ENST00000482928 OR4C13Q8NGP0 309 aa10.11□□□□□ -0.79
TSPAN1-208ENST00000482928 GRPEL2Q8TAA5 225 aa10.11□□□□□ -0.79
TSPAN1-208ENST00000482928 OSR1Q8TAX0 266 aaPredicted RBP10.11□□□□□ -0.79
TSPAN1-208ENST00000482928 ST6GALNAC6Q969X2 333 aa10.11□□□□□ -0.79
TSPAN1-208ENST00000482928 HARBI1Q96MB7 349 aa10.11□□□□□ -0.79
TSPAN1-208ENST00000482928 CLCC1Q96S66 551 aa10.11□□□□□ -0.79
TSPAN1-208ENST00000482928 TBX15Q96SF7 602 aa10.11□□□□□ -0.79
TSPAN1-208ENST00000482928 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.11□□□□□ -0.79
TSPAN1-208ENST00000482928 MBD2Q9UBB5 411 aa10.11□□□□□ -0.79
TSPAN1-208ENST00000482928 CACFD1Q9UGQ2 172 aa10.11□□□□□ -0.79
TSPAN1-208ENST00000482928 TBL2Q9Y4P3 447 aaKnown RBP10.11□□□□□ -0.79
TSPAN1-208ENST00000482928 MINOS1-NBL1R4GNA1 71 aa10.11□□□□□ -0.79
TSPAN1-208ENST00000482928 HRNRQ86YZ3 2850 aaPredicted RBP10.11□□□□□ -0.79
TSPAN1-208ENST00000482928 IGHV1-3A0A0C4DH29 117 aa10.1□□□□□ -0.79
TSPAN1-208ENST00000482928 ODF3BA8MYP8 253 aa10.1□□□□□ -0.79
TSPAN1-208ENST00000482928 OOSP1A8MZH6 123 aa10.1□□□□□ -0.79
TSPAN1-208ENST00000482928 RNASEK-C17orf49H0YIS7 233 aa10.1□□□□□ -0.79
TSPAN1-208ENST00000482928 MED6O75586 246 aa10.1□□□□□ -0.79
TSPAN1-208ENST00000482928 NXPH3O95157 252 aa10.1□□□□□ -0.79
TSPAN1-208ENST00000482928 SLC25A4P12235 298 aa10.1□□□□□ -0.79
TSPAN1-208ENST00000482928 MMP9P14780 707 aa10.1□□□□□ -0.79
TSPAN1-208ENST00000482928 PAX8Q06710 450 aa10.1□□□□□ -0.79
TSPAN1-208ENST00000482928 VMA21Q3ZAQ7 101 aa10.1□□□□□ -0.79
TSPAN1-208ENST00000482928 Q5BKY6 102 aa10.1□□□□□ -0.79
TSPAN1-208ENST00000482928 GPR157Q5UAW9 335 aa10.1□□□□□ -0.79
TSPAN1-208ENST00000482928 C1orf229Q6ZS94 237 aaPredicted RBP10.1□□□□□ -0.79
TSPAN1-208ENST00000482928 OR8H3Q8N146 312 aa10.1□□□□□ -0.79
TSPAN1-208ENST00000482928 OR5AN1Q8NGI8 311 aa10.1□□□□□ -0.79
TSPAN1-208ENST00000482928 OR4D5Q8NGN0 318 aa10.1□□□□□ -0.79
TSPAN1-208ENST00000482928 C7orf69Q9H7B7 122 aa10.1□□□□□ -0.79
TSPAN1-208ENST00000482928 TMEM140Q9NV12 185 aa10.1□□□□□ -0.79
TSPAN1-208ENST00000482928 HIF1ANQ9NWT6 349 aa10.1□□□□□ -0.79
TSPAN1-208ENST00000482928 HSPB11Q9Y547 144 aa10.1□□□□□ -0.79
TSPAN1-208ENST00000482928 HILPDAQ9Y5L2 63 aa10.1□□□□□ -0.79
TSPAN1-208ENST00000482928 POMT1Q9Y6A1 747 aa10.1□□□□□ -0.79
TSPAN1-208ENST00000482928 TRAV14DV4A0A0A6YYC5 116 aa10.09□□□□□ -0.79
TSPAN1-208ENST00000482928 FAM90A9PA6NNJ1 464 aa10.09□□□□□ -0.79
TSPAN1-208ENST00000482928 HMSDA8MTL9 139 aa10.09□□□□□ -0.79
TSPAN1-208ENST00000482928 E5RGE8 158 aa10.09□□□□□ -0.79
TSPAN1-208ENST00000482928 J3QLI3 93 aa10.09□□□□□ -0.79
TSPAN1-208ENST00000482928 K7EPK0 472 aa10.09□□□□□ -0.79
TSPAN1-208ENST00000482928 MBPP02686 304 aaPredicted RBP10.09□□□□□ -0.79
TSPAN1-208ENST00000482928 AP2S1P53680 142 aaPredicted RBP10.09□□□□□ -0.79
TSPAN1-208ENST00000482928 DIAPH2-AS1Q14236 149 aa10.09□□□□□ -0.79
TSPAN1-208ENST00000482928 MIDNQ504T8 468 aa10.09□□□□□ -0.79
TSPAN1-208ENST00000482928 FAM71E2Q8N5Q1 922 aa10.09□□□□□ -0.79
TSPAN1-208ENST00000482928 VSTM2AQ8TAG5 236 aa10.09□□□□□ -0.79
TSPAN1-208ENST00000482928 RHOVQ96L33 236 aa10.09□□□□□ -0.79
TSPAN1-208ENST00000482928 MS4A7Q9GZW8 240 aaPredicted RBP10.09□□□□□ -0.79
TSPAN1-208ENST00000482928 MFFQ9GZY8 342 aa10.09□□□□□ -0.79
TSPAN1-208ENST00000482928 COA4Q9NYJ1 87 aa10.09□□□□□ -0.79
TSPAN1-208ENST00000482928 NUP50Q9UKX7 468 aa10.09□□□□□ -0.79
TSPAN1-208ENST00000482928 RCL1Q9Y2P8 373 aaKnown RBP10.09□□□□□ -0.79
TSPAN1-208ENST00000482928 NSG2Q9Y328 171 aa10.09□□□□□ -0.79
TSPAN1-208ENST00000482928 SONP18583 2426 aaKnown RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms