RNA–Protein interactions for RNA: ENST00000482519.1

VAMP4-204, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 3

Gene VAMP4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-204ENST00000482519 HPGDSO60760 199 aa12.84□□□□□ -0.35
VAMP4-204ENST00000482519 ACTL6BO94805 426 aa12.84□□□□□ -0.35
VAMP4-204ENST00000482519 PMP2P02689 132 aa12.84□□□□□ -0.35
VAMP4-204ENST00000482519 SAA1P0DJI8 122 aaPredicted RBP12.84□□□□□ -0.35
VAMP4-204ENST00000482519 RFX2P48378 723 aa12.84□□□□□ -0.35
VAMP4-204ENST00000482519 RUNX1Q01196 453 aa12.84□□□□□ -0.35
VAMP4-204ENST00000482519 FHL3Q13643 280 aa12.84□□□□□ -0.35
VAMP4-204ENST00000482519 DEFB121Q5J5C9 76 aa12.84□□□□□ -0.35
VAMP4-204ENST00000482519 TMEM17Q86X19 198 aa12.84□□□□□ -0.35
VAMP4-204ENST00000482519 OR4S2Q8NH73 311 aa12.84□□□□□ -0.35
VAMP4-204ENST00000482519 SLA2Q9H6Q3 261 aa12.84□□□□□ -0.35
VAMP4-204ENST00000482519 EHFQ9NZC4 300 aa12.84□□□□□ -0.35
VAMP4-204ENST00000482519 DNAH3Q8TD57 4116 aa12.84□□□□□ -0.35
VAMP4-204ENST00000482519 APOA1P02647 267 aa12.83□□□□□ -0.36
VAMP4-204ENST00000482519 LGALS1P09382 135 aaKnown RBP12.83□□□□□ -0.36
VAMP4-204ENST00000482519 ELK1P19419 428 aa12.83□□□□□ -0.36
VAMP4-204ENST00000482519 HERV-K104P61576 105 aa12.83□□□□□ -0.36
VAMP4-204ENST00000482519 EGFEM1PQ0D2K5 195 aa12.83□□□□□ -0.36
VAMP4-204ENST00000482519 CTF1Q16619 201 aa12.83□□□□□ -0.36
VAMP4-204ENST00000482519 ZNF66Q6ZN08 573 aa12.83□□□□□ -0.36
VAMP4-204ENST00000482519 OVCH2Q7RTZ1 564 aa12.83□□□□□ -0.36
VAMP4-204ENST00000482519 GPR141Q7Z602 305 aa12.83□□□□□ -0.36
VAMP4-204ENST00000482519 ANKRD13BQ86YJ7 626 aa12.83□□□□□ -0.36
VAMP4-204ENST00000482519 SNX29P2Q8IUI4 249 aa12.83□□□□□ -0.36
VAMP4-204ENST00000482519 POC5Q8NA72 575 aa12.83□□□□□ -0.36
VAMP4-204ENST00000482519 OR5H2Q8NGV7 314 aa12.83□□□□□ -0.36
VAMP4-204ENST00000482519 ZNF430Q9H8G1 570 aaPredicted RBP12.83□□□□□ -0.36
VAMP4-204ENST00000482519 COA4Q9NYJ1 87 aa12.83□□□□□ -0.36
VAMP4-204ENST00000482519 C13orf42A0A1B0GVH6 325 aa12.82□□□□□ -0.36
VAMP4-204ENST00000482519 WI2-2373I1.2A0A1W2PRP0 233 aa12.82□□□□□ -0.36
VAMP4-204ENST00000482519 FAM25AB3EWG3 89 aa12.82□□□□□ -0.36
VAMP4-204ENST00000482519 FAM25CB3EWG5 89 aa12.82□□□□□ -0.36
VAMP4-204ENST00000482519 FAM25GB3EWG6 89 aa12.82□□□□□ -0.36
VAMP4-204ENST00000482519 K7EIL1 84 aa12.82□□□□□ -0.36
VAMP4-204ENST00000482519 SULT1C2O00338 296 aa12.82□□□□□ -0.36
VAMP4-204ENST00000482519 GABARAPO95166 117 aa12.82□□□□□ -0.36
VAMP4-204ENST00000482519 HLA-DMAP28067 261 aa12.82□□□□□ -0.36
VAMP4-204ENST00000482519 SLURP1P55000 103 aa12.82□□□□□ -0.36
VAMP4-204ENST00000482519 EIF4EBP1Q13541 118 aaPredicted RBP12.82□□□□□ -0.36
VAMP4-204ENST00000482519 MRGPRG-AS1Q2M3A8 158 aa12.82□□□□□ -0.36
VAMP4-204ENST00000482519 C9orf66Q5T8R8 295 aa12.82□□□□□ -0.36
VAMP4-204ENST00000482519 ASPHD1Q5U4P2 390 aa12.82□□□□□ -0.36
VAMP4-204ENST00000482519 MZT2AQ6P582 158 aa12.82□□□□□ -0.36
VAMP4-204ENST00000482519 GIMAP1Q8WWP7 306 aa12.82□□□□□ -0.36
VAMP4-204ENST00000482519 SRSF12Q8WXF0 261 aaKnown RBP12.82□□□□□ -0.36
VAMP4-204ENST00000482519 DCUN1D4Q92564 292 aa12.82□□□□□ -0.36
VAMP4-204ENST00000482519 IGHV4OR15-8A0A075B7B6 117 aa12.81□□□□□ -0.36
VAMP4-204ENST00000482519 A0A087WW49 117 aa12.81□□□□□ -0.36
VAMP4-204ENST00000482519 LINC01619G3V211 115 aa12.81□□□□□ -0.36
VAMP4-204ENST00000482519 CREBL2O60519 120 aaPredicted RBP12.81□□□□□ -0.36
VAMP4-204ENST00000482519 BRWD1-AS2P59051 145 aa12.81□□□□□ -0.36
VAMP4-204ENST00000482519 TAS2R46P59540 309 aa12.81□□□□□ -0.36
VAMP4-204ENST00000482519 DGCR2P98153 550 aa12.81□□□□□ -0.36
VAMP4-204ENST00000482519 DEFA5Q01523 94 aa12.81□□□□□ -0.36
VAMP4-204ENST00000482519 SSX9Q7RTT3 188 aa12.81□□□□□ -0.36
VAMP4-204ENST00000482519 SPAG16Q8N0X2 631 aa12.81□□□□□ -0.36
VAMP4-204ENST00000482519 AP3S1Q92572 193 aa12.81□□□□□ -0.36
VAMP4-204ENST00000482519 TMEM68Q96MH6 324 aa12.81□□□□□ -0.36
VAMP4-204ENST00000482519 CMTM3Q96MX0 182 aa12.81□□□□□ -0.36
VAMP4-204ENST00000482519 ZNF2Q9BSG1 426 aaPredicted RBP12.81□□□□□ -0.36
VAMP4-204ENST00000482519 TNCP24821 2201 aa12.81□□□□□ -0.36
VAMP4-204ENST00000482519 RAMP3O60896 148 aa12.8□□□□□ -0.36
VAMP4-204ENST00000482519 OR2A4O95047 310 aa12.8□□□□□ -0.36
VAMP4-204ENST00000482519 ZNF182P17025 639 aaPredicted RBP12.8□□□□□ -0.36
VAMP4-204ENST00000482519 KIR2DS2P43631 304 aa12.8□□□□□ -0.36
VAMP4-204ENST00000482519 DYRK1AQ13627 763 aa12.8□□□□□ -0.36
VAMP4-204ENST00000482519 C10orf55Q5SWW7 151 aa12.8□□□□□ -0.36
VAMP4-204ENST00000482519 ZNF818PQ6ZRF7 136 aa12.8□□□□□ -0.36
VAMP4-204ENST00000482519 MMD2Q8IY49 270 aa12.8□□□□□ -0.36
VAMP4-204ENST00000482519 ZBTB34Q8NCN2 500 aa12.8□□□□□ -0.36
VAMP4-204ENST00000482519 OR51H1Q8NH63 302 aa12.8□□□□□ -0.36
VAMP4-204ENST00000482519 RHOVQ96L33 236 aa12.8□□□□□ -0.36
VAMP4-204ENST00000482519 OR2A7Q96R45 310 aa12.8□□□□□ -0.36
VAMP4-204ENST00000482519 ZMAT5Q9UDW3 170 aaKnown RBP12.8□□□□□ -0.36
VAMP4-204ENST00000482519 ANAPC10Q9UM13 185 aa12.8□□□□□ -0.36
VAMP4-204ENST00000482519 A0A0G2JLM5 398 aa12.79□□□□□ -0.36
VAMP4-204ENST00000482519 ANKRD34BA5PLL1 514 aa12.79□□□□□ -0.36
VAMP4-204ENST00000482519 H3BUA1 57 aa12.79□□□□□ -0.36
VAMP4-204ENST00000482519 OVOL1O14753 267 aa12.79□□□□□ -0.36
VAMP4-204ENST00000482519 HRASP01112 189 aa12.79□□□□□ -0.36
VAMP4-204ENST00000482519 HSPB1P04792 205 aaKnown RBP12.79□□□□□ -0.36
VAMP4-204ENST00000482519 HRH1P35367 487 aa12.79□□□□□ -0.36
VAMP4-204ENST00000482519 ECI1P42126 302 aa12.79□□□□□ -0.36
VAMP4-204ENST00000482519 ALDH3B2P48448 385 aa12.79□□□□□ -0.36
VAMP4-204ENST00000482519 CATR1Q13166 79 aa12.79□□□□□ -0.36
VAMP4-204ENST00000482519 MSMO1Q15800 293 aa12.79□□□□□ -0.36
VAMP4-204ENST00000482519 RNASE12Q5GAN4 147 aaKnown RBP12.79□□□□□ -0.36
VAMP4-204ENST00000482519 AADACL3Q5VUY0 350 aa12.79□□□□□ -0.36
VAMP4-204ENST00000482519 DHRS11Q6UWP2 260 aa12.79□□□□□ -0.36
VAMP4-204ENST00000482519 LYSMD2Q8IV50 215 aa12.79□□□□□ -0.36
VAMP4-204ENST00000482519 VSTM2AQ8TAG5 236 aa12.79□□□□□ -0.36
VAMP4-204ENST00000482519 GPX8Q8TED1 209 aa12.79□□□□□ -0.36
VAMP4-204ENST00000482519 DLX4Q92988 240 aaPredicted RBP12.79□□□□□ -0.36
VAMP4-204ENST00000482519 SCOCQ9UIL1 159 aa12.79□□□□□ -0.36
VAMP4-204ENST00000482519 KBTBD11O94819 623 aa12.78□□□□□ -0.36
VAMP4-204ENST00000482519 PRH1P02810 166 aa12.78□□□□□ -0.36
VAMP4-204ENST00000482519 OR9G9P0C7N8 305 aa12.78□□□□□ -0.36
VAMP4-204ENST00000482519 NAT1P18440 290 aa12.78□□□□□ -0.36
VAMP4-204ENST00000482519 GNRHRP30968 328 aa12.78□□□□□ -0.36
VAMP4-204ENST00000482519 TSPAN5P62079 268 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms