RNA–Protein interactions for RNA: ENST00000481800.1

COL9A3-212, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-212ENST00000481800 FCER2P06734 321 aa13.61□□□□□ -0.23
COL9A3-212ENST00000481800 SAA1P0DJI8 122 aaPredicted RBP13.61□□□□□ -0.23
COL9A3-212ENST00000481800 FCGR2CP31995 323 aa13.61□□□□□ -0.23
COL9A3-212ENST00000481800 RPL30P62888 115 aaKnown RBP13.61□□□□□ -0.23
COL9A3-212ENST00000481800 CDK10Q15131 360 aa13.61□□□□□ -0.23
COL9A3-212ENST00000481800 OVCH2Q7RTZ1 564 aa13.61□□□□□ -0.23
COL9A3-212ENST00000481800 MMD2Q8IY49 270 aa13.61□□□□□ -0.23
COL9A3-212ENST00000481800 OR4S2Q8NH73 311 aa13.61□□□□□ -0.23
COL9A3-212ENST00000481800 SECTM1Q8WVN6 248 aa13.61□□□□□ -0.23
COL9A3-212ENST00000481800 RANGRFQ9HD47 186 aaPredicted RBP13.61□□□□□ -0.23
COL9A3-212ENST00000481800 IFT46Q9NQC8 304 aa13.61□□□□□ -0.23
COL9A3-212ENST00000481800 TAS2R8Q9NYW2 309 aa13.61□□□□□ -0.23
COL9A3-212ENST00000481800 XRCC3O43542 346 aa13.6□□□□□ -0.23
COL9A3-212ENST00000481800 APELAP0DMC3 54 aa13.6□□□□□ -0.23
COL9A3-212ENST00000481800 PTHLHP12272 177 aa13.6□□□□□ -0.23
COL9A3-212ENST00000481800 MRGPRG-AS1Q2M3A8 158 aa13.6□□□□□ -0.23
COL9A3-212ENST00000481800 UBE2NLQ5JXB2 153 aa13.6□□□□□ -0.23
COL9A3-212ENST00000481800 ZNF66Q6ZN08 573 aa13.6□□□□□ -0.23
COL9A3-212ENST00000481800 MFSD4AQ8N468 514 aa13.6□□□□□ -0.23
COL9A3-212ENST00000481800 SAMD12Q8N8I0 201 aa13.6□□□□□ -0.23
COL9A3-212ENST00000481800 OR13F1Q8NGS4 319 aa13.6□□□□□ -0.23
COL9A3-212ENST00000481800 VSTM2AQ8TAG5 236 aa13.6□□□□□ -0.23
COL9A3-212ENST00000481800 SRSF12Q8WXF0 261 aaKnown RBP13.6□□□□□ -0.23
COL9A3-212ENST00000481800 OR4C12Q96R67 309 aa13.6□□□□□ -0.23
COL9A3-212ENST00000481800 TINAGL1Q9GZM7 467 aaPredicted RBP13.6□□□□□ -0.23
COL9A3-212ENST00000481800 ZNF430Q9H8G1 570 aaPredicted RBP13.6□□□□□ -0.23
COL9A3-212ENST00000481800 ANKRD34BA5PLL1 514 aa13.59□□□□□ -0.23
COL9A3-212ENST00000481800 BRI3O95415 125 aa13.59□□□□□ -0.23
COL9A3-212ENST00000481800 OR9G9P0C7N8 305 aa13.59□□□□□ -0.23
COL9A3-212ENST00000481800 ZP3P21754 424 aa13.59□□□□□ -0.23
COL9A3-212ENST00000481800 VAX1Q5SQQ9 334 aa13.59□□□□□ -0.23
COL9A3-212ENST00000481800 TMEM69Q5SWH9 247 aa13.59□□□□□ -0.23
COL9A3-212ENST00000481800 ACSM6Q6P461 480 aa13.59□□□□□ -0.23
COL9A3-212ENST00000481800 SPIN2AQ99865 258 aa13.59□□□□□ -0.23
COL9A3-212ENST00000481800 SPIN2BQ9BPZ2 258 aa13.59□□□□□ -0.23
COL9A3-212ENST00000481800 ELOVL1Q9BW60 279 aa13.59□□□□□ -0.23
COL9A3-212ENST00000481800 CCL28Q9NRJ3 127 aa13.59□□□□□ -0.23
COL9A3-212ENST00000481800 MEIS3P1A6NDR6 274 aa13.58□□□□□ -0.24
COL9A3-212ENST00000481800 OR2A4O95047 310 aa13.58□□□□□ -0.24
COL9A3-212ENST00000481800 PPYP01298 95 aa13.58□□□□□ -0.24
COL9A3-212ENST00000481800 KIR2DS2P43631 304 aa13.58□□□□□ -0.24
COL9A3-212ENST00000481800 FXYD4P59646 89 aa13.58□□□□□ -0.24
COL9A3-212ENST00000481800 MSMO1Q15800 293 aa13.58□□□□□ -0.24
COL9A3-212ENST00000481800 VKORC1L1Q8N0U8 176 aa13.58□□□□□ -0.24
COL9A3-212ENST00000481800 ZBTB34Q8NCN2 500 aa13.58□□□□□ -0.24
COL9A3-212ENST00000481800 OR5AP2Q8NGF4 316 aa13.58□□□□□ -0.24
COL9A3-212ENST00000481800 OR6Q1Q8NGQ2 317 aa13.58□□□□□ -0.24
COL9A3-212ENST00000481800 USMG5Q96IX5 58 aa13.58□□□□□ -0.24
COL9A3-212ENST00000481800 OR2A7Q96R45 310 aa13.58□□□□□ -0.24
COL9A3-212ENST00000481800 SLC5A7Q9GZV3 580 aa13.58□□□□□ -0.24
COL9A3-212ENST00000481800 LSM4Q9Y4Z0 139 aaKnown RBP13.58□□□□□ -0.24
COL9A3-212ENST00000481800 DNAH3Q8TD57 4116 aa13.58□□□□□ -0.24
COL9A3-212ENST00000481800 TNFSF12O43508 249 aa13.57□□□□□ -0.24
COL9A3-212ENST00000481800 HRASP01112 189 aa13.57□□□□□ -0.24
COL9A3-212ENST00000481800 TAS2R20P59543 309 aa13.57□□□□□ -0.24
COL9A3-212ENST00000481800 EIF4EBP1Q13541 118 aaPredicted RBP13.57□□□□□ -0.24
COL9A3-212ENST00000481800 ADAD2Q8NCV1 583 aaKnown RBP13.57□□□□□ -0.24
COL9A3-212ENST00000481800 GIMAP1Q8WWP7 306 aa13.57□□□□□ -0.24
COL9A3-212ENST00000481800 SNAPC3Q92966 411 aa13.57□□□□□ -0.24
COL9A3-212ENST00000481800 SLC25A46Q96AG3 418 aa13.57□□□□□ -0.24
COL9A3-212ENST00000481800 KCTD12Q96CX2 325 aaKnown RBP13.57□□□□□ -0.24
COL9A3-212ENST00000481800 GPHA2Q96T91 129 aa13.57□□□□□ -0.24
COL9A3-212ENST00000481800 AIFM2Q9BRQ8 373 aa13.57□□□□□ -0.24
COL9A3-212ENST00000481800 HERV-K104P61576 105 aa13.56□□□□□ -0.24
COL9A3-212ENST00000481800 DEFA5Q01523 94 aa13.56□□□□□ -0.24
COL9A3-212ENST00000481800 CATR1Q13166 79 aa13.56□□□□□ -0.24
COL9A3-212ENST00000481800 C11orf87Q6NUJ2 197 aa13.56□□□□□ -0.24
COL9A3-212ENST00000481800 SLC25A42Q86VD7 318 aa13.56□□□□□ -0.24
COL9A3-212ENST00000481800 FUNDC2Q9BWH2 189 aa13.56□□□□□ -0.24
COL9A3-212ENST00000481800 PEF1Q9UBV8 284 aaKnown RBP13.56□□□□□ -0.24
COL9A3-212ENST00000481800 SMIM31A0A1B0GVY4 71 aa13.55□□□□□ -0.24
COL9A3-212ENST00000481800 DPPA5A6NC42 116 aa13.55□□□□□ -0.24
COL9A3-212ENST00000481800 KBTBD11O94819 623 aa13.55□□□□□ -0.24
COL9A3-212ENST00000481800 NHLRC4P0CG21 123 aaPredicted RBP13.55□□□□□ -0.24
COL9A3-212ENST00000481800 PRSS3P35030 304 aa13.55□□□□□ -0.24
COL9A3-212ENST00000481800 DYRK1AQ13627 763 aa13.55□□□□□ -0.24
COL9A3-212ENST00000481800 TATDN3Q17R31 274 aa13.55□□□□□ -0.24
COL9A3-212ENST00000481800 C10orf55Q5SWW7 151 aa13.55□□□□□ -0.24
COL9A3-212ENST00000481800 ZNF343Q6P1L6 599 aa13.55□□□□□ -0.24
COL9A3-212ENST00000481800 SSX9Q7RTT3 188 aa13.55□□□□□ -0.24
COL9A3-212ENST00000481800 TMEM17Q86X19 198 aa13.55□□□□□ -0.24
COL9A3-212ENST00000481800 SPAG16Q8N0X2 631 aa13.55□□□□□ -0.24
COL9A3-212ENST00000481800 TMEM167AQ8TBQ9 72 aa13.55□□□□□ -0.24
COL9A3-212ENST00000481800 BORCS5Q969J3 196 aa13.55□□□□□ -0.24
COL9A3-212ENST00000481800 RSRP1Q9BUV0 290 aa13.55□□□□□ -0.24
COL9A3-212ENST00000481800 EHFQ9NZC4 300 aa13.55□□□□□ -0.24
COL9A3-212ENST00000481800 COMMD3Q9UBI1 195 aa13.55□□□□□ -0.24
COL9A3-212ENST00000481800 FAM223BA6NKX1 122 aa13.54□□□□□ -0.24
COL9A3-212ENST00000481800 TRIM64CA6NLI5 447 aa13.54□□□□□ -0.24
COL9A3-212ENST00000481800 SULT1C2O00338 296 aa13.54□□□□□ -0.24
COL9A3-212ENST00000481800 PRH1P02810 166 aa13.54□□□□□ -0.24
COL9A3-212ENST00000481800 SPNP16150 400 aa13.54□□□□□ -0.24
COL9A3-212ENST00000481800 MAS1LP35410 378 aa13.54□□□□□ -0.24
COL9A3-212ENST00000481800 RPL27AP46776 148 aaKnown RBP13.54□□□□□ -0.24
COL9A3-212ENST00000481800 BRWD1-AS2P59051 145 aa13.54□□□□□ -0.24
COL9A3-212ENST00000481800 VBP1P61758 197 aa13.54□□□□□ -0.24
COL9A3-212ENST00000481800 NCS1P62166 190 aa13.54□□□□□ -0.24
COL9A3-212ENST00000481800 RHOGP84095 191 aa13.54□□□□□ -0.24
COL9A3-212ENST00000481800 ATP5G2Q06055 141 aa13.54□□□□□ -0.24
COL9A3-212ENST00000481800 ANKRD13BQ86YJ7 626 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms