RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 A0A0B4J293 547 aa10.02□□□□□ -0.81
TRAPPC12-218ENST00000479897 MARCH11A6NNE9 402 aa10.02□□□□□ -0.81
TRAPPC12-218ENST00000479897 SNRPGP15A8MWD9 76 aa10.02□□□□□ -0.81
TRAPPC12-218ENST00000479897 SHOXO15266 292 aa10.02□□□□□ -0.81
TRAPPC12-218ENST00000479897 NBR2O15453 112 aa10.02□□□□□ -0.81
TRAPPC12-218ENST00000479897 FGF16O43320 207 aa10.02□□□□□ -0.81
TRAPPC12-218ENST00000479897 HOXA3O43365 443 aaPredicted RBP10.02□□□□□ -0.81
TRAPPC12-218ENST00000479897 ATG12O94817 140 aa10.02□□□□□ -0.81
TRAPPC12-218ENST00000479897 HRASP01112 189 aa10.02□□□□□ -0.81
TRAPPC12-218ENST00000479897 IGLV2-23P01705 113 aa10.02□□□□□ -0.81
TRAPPC12-218ENST00000479897 FGF2P09038 288 aa10.02□□□□□ -0.81
TRAPPC12-218ENST00000479897 CD24P25063 80 aa10.02□□□□□ -0.81
TRAPPC12-218ENST00000479897 LPAR6P43657 344 aa10.02□□□□□ -0.81
TRAPPC12-218ENST00000479897 RAB25P57735 213 aa10.02□□□□□ -0.81
TRAPPC12-218ENST00000479897 RPS16P62249 146 aaKnown RBP10.02□□□□□ -0.81
TRAPPC12-218ENST00000479897 HES1Q14469 280 aa10.02□□□□□ -0.81
TRAPPC12-218ENST00000479897 SLC9A3R2Q15599 337 aa10.02□□□□□ -0.81
TRAPPC12-218ENST00000479897 SP6Q3SY56 376 aa10.02□□□□□ -0.81
TRAPPC12-218ENST00000479897 LHFPL5Q8TAF8 219 aa10.02□□□□□ -0.81
TRAPPC12-218ENST00000479897 ZNF431Q8TF32 576 aaPredicted RBP10.02□□□□□ -0.81
TRAPPC12-218ENST00000479897 MITD1Q8WV92 249 aa10.02□□□□□ -0.81
TRAPPC12-218ENST00000479897 SEC22AQ96IW7 307 aa10.02□□□□□ -0.81
TRAPPC12-218ENST00000479897 RBM14Q96PK6 669 aaKnown RBP10.02□□□□□ -0.81
TRAPPC12-218ENST00000479897 JMJD8Q96S16 334 aa10.02□□□□□ -0.81
TRAPPC12-218ENST00000479897 GPN1Q9HCN4 374 aaPredicted RBP10.02□□□□□ -0.81
TRAPPC12-218ENST00000479897 C1RLQ9NZP8 487 aa10.02□□□□□ -0.81
TRAPPC12-218ENST00000479897 DNAJC9-AS1A6NH13 148 aa10.01□□□□□ -0.81
TRAPPC12-218ENST00000479897 SRRM4A7MD48 611 aaKnown RBP10.01□□□□□ -0.81
TRAPPC12-218ENST00000479897 M0QZK8 103 aa10.01□□□□□ -0.81
TRAPPC12-218ENST00000479897 P0C879 139 aa10.01□□□□□ -0.81
TRAPPC12-218ENST00000479897 UBE2KP61086 200 aa10.01□□□□□ -0.81
TRAPPC12-218ENST00000479897 RPL15P61313 204 aaKnown RBP10.01□□□□□ -0.81
TRAPPC12-218ENST00000479897 MMDQ15546 238 aa10.01□□□□□ -0.81
TRAPPC12-218ENST00000479897 TATDN3Q17R31 274 aa10.01□□□□□ -0.81
TRAPPC12-218ENST00000479897 ANKRD55Q3KP44 614 aa10.01□□□□□ -0.81
TRAPPC12-218ENST00000479897 FAM219AQ8IW50 185 aa10.01□□□□□ -0.81
TRAPPC12-218ENST00000479897 PUSL1Q8N0Z8 303 aaKnown RBP10.01□□□□□ -0.81
TRAPPC12-218ENST00000479897 LGI3Q8N145 548 aa10.01□□□□□ -0.81
TRAPPC12-218ENST00000479897 FAM71E2Q8N5Q1 922 aa10.01□□□□□ -0.81
TRAPPC12-218ENST00000479897 COQ8AQ8NI60 647 aa10.01□□□□□ -0.81
TRAPPC12-218ENST00000479897 VSTM2AQ8TAG5 236 aa10.01□□□□□ -0.81
TRAPPC12-218ENST00000479897 R3HDM4Q96D70 268 aa10.01□□□□□ -0.81
TRAPPC12-218ENST00000479897 RHOVQ96L33 236 aa10.01□□□□□ -0.81
TRAPPC12-218ENST00000479897 SEC22CQ9BRL7 303 aa10.01□□□□□ -0.81
TRAPPC12-218ENST00000479897 SLC25A33Q9BSK2 321 aa10.01□□□□□ -0.81
TRAPPC12-218ENST00000479897 BEX1Q9HBH7 125 aa10.01□□□□□ -0.81
TRAPPC12-218ENST00000479897 RAB18Q9NP72 206 aa10.01□□□□□ -0.81
TRAPPC12-218ENST00000479897 PLSCR3Q9NRY6 295 aa10.01□□□□□ -0.81
TRAPPC12-218ENST00000479897 BET1LQ9NYM9 111 aa10.01□□□□□ -0.81
TRAPPC12-218ENST00000479897 MOB4Q9Y3A3 225 aa10.01□□□□□ -0.81
TRAPPC12-218ENST00000479897 DBX1A6NMT0 343 aa10□□□□□ -0.81
TRAPPC12-218ENST00000479897 RRHO14718 337 aa10□□□□□ -0.81
TRAPPC12-218ENST00000479897 CREBL2O60519 120 aaPredicted RBP10□□□□□ -0.81
TRAPPC12-218ENST00000479897 CRYGBP07316 175 aa10□□□□□ -0.81
TRAPPC12-218ENST00000479897 IL6RP08887 468 aaPredicted RBP10□□□□□ -0.81
TRAPPC12-218ENST00000479897 SAA1P0DJI8 122 aaPredicted RBP10□□□□□ -0.81
TRAPPC12-218ENST00000479897 ERVK-16P61578 105 aa10□□□□□ -0.81
TRAPPC12-218ENST00000479897 PSG5Q15238 335 aa10□□□□□ -0.81
TRAPPC12-218ENST00000479897 VMA21Q3ZAQ7 101 aa10□□□□□ -0.81
TRAPPC12-218ENST00000479897 SELENOHQ8IZQ5 122 aaKnown RBP10□□□□□ -0.81
TRAPPC12-218ENST00000479897 Q8N9W7 124 aa10□□□□□ -0.81
TRAPPC12-218ENST00000479897 TEX45Q8NA69 505 aa10□□□□□ -0.81
TRAPPC12-218ENST00000479897 OR52B4Q8NGK2 314 aa10□□□□□ -0.81
TRAPPC12-218ENST00000479897 CASTOR1Q8WTX7 329 aa10□□□□□ -0.81
TRAPPC12-218ENST00000479897 LSM10Q969L4 123 aaKnown RBP10□□□□□ -0.81
TRAPPC12-218ENST00000479897 RITA1Q96K30 269 aa10□□□□□ -0.81
TRAPPC12-218ENST00000479897 PHB2Q99623 299 aa10□□□□□ -0.81
TRAPPC12-218ENST00000479897 CHIAQ9BZP6 476 aa10□□□□□ -0.81
TRAPPC12-218ENST00000479897 ESM1Q9NQ30 184 aa10□□□□□ -0.81
TRAPPC12-218ENST00000479897 KIAA1456Q9P272 454 aa10□□□□□ -0.81
TRAPPC12-218ENST00000479897 TNCP24821 2201 aa9.99□□□□□ -0.81
TRAPPC12-218ENST00000479897 CHST1O43916 411 aa9.99□□□□□ -0.81
TRAPPC12-218ENST00000479897 KBTBD11O94819 623 aa9.99□□□□□ -0.81
TRAPPC12-218ENST00000479897 IGKV1-5P01602 117 aa9.99□□□□□ -0.81
TRAPPC12-218ENST00000479897 RNASE1P07998 156 aaKnown RBP9.99□□□□□ -0.81
TRAPPC12-218ENST00000479897 VDAC1P21796 283 aa9.99□□□□□ -0.81
TRAPPC12-218ENST00000479897 CNTFRP26992 372 aa9.99□□□□□ -0.81
TRAPPC12-218ENST00000479897 AKR1C2P52895 323 aa9.99□□□□□ -0.81
TRAPPC12-218ENST00000479897 F2RL1P55085 397 aa9.99□□□□□ -0.81
TRAPPC12-218ENST00000479897 LY6EQ16553 131 aa9.99□□□□□ -0.81
TRAPPC12-218ENST00000479897 C5orf64Q2M2E5 130 aa9.99□□□□□ -0.81
TRAPPC12-218ENST00000479897 TMEM268Q5VZI3 342 aa9.99□□□□□ -0.81
TRAPPC12-218ENST00000479897 OR4A47Q6IF82 309 aa9.99□□□□□ -0.81
TRAPPC12-218ENST00000479897 TMEM219Q86XT9 240 aa9.99□□□□□ -0.81
TRAPPC12-218ENST00000479897 ZNF695Q8IW36 515 aa9.99□□□□□ -0.81
TRAPPC12-218ENST00000479897 C12orf45Q8N5I9 185 aaPredicted RBP9.99□□□□□ -0.81
TRAPPC12-218ENST00000479897 SLC35G3Q8N808 338 aa9.99□□□□□ -0.81
TRAPPC12-218ENST00000479897 C5orf56Q8N8D9 126 aa9.99□□□□□ -0.81
TRAPPC12-218ENST00000479897 OR4A5Q8NH83 315 aa9.99□□□□□ -0.81
TRAPPC12-218ENST00000479897 TMEM167AQ8TBQ9 72 aa9.99□□□□□ -0.81
TRAPPC12-218ENST00000479897 RBMXL1Q96E39 390 aaKnown RBP9.99□□□□□ -0.81
TRAPPC12-218ENST00000479897 TMEM140Q9NV12 185 aa9.99□□□□□ -0.81
TRAPPC12-218ENST00000479897 TMED3Q9Y3Q3 217 aa9.99□□□□□ -0.81
TRAPPC12-218ENST00000479897 TCF21O43680 179 aa9.98□□□□□ -0.81
TRAPPC12-218ENST00000479897 SLC25A17O43808 307 aa9.98□□□□□ -0.81
TRAPPC12-218ENST00000479897 OR2A4O95047 310 aa9.98□□□□□ -0.81
TRAPPC12-218ENST00000479897 KRASP01116 189 aa9.98□□□□□ -0.81
TRAPPC12-218ENST00000479897 HLA-DRB1P01911 266 aa9.98□□□□□ -0.81
TRAPPC12-218ENST00000479897 G6PCP35575 357 aa9.98□□□□□ -0.81
TRAPPC12-218ENST00000479897 UBA52P62987 128 aaKnown RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms