RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 SRD5A3Q9H8P0 318 aa12.04□□□□□ -0.48
NPHP4-208ENST00000478423 TMEM106BQ9NUM4 274 aa12.04□□□□□ -0.48
NPHP4-208ENST00000478423 HYPMO75409 117 aa12.03□□□□□ -0.48
NPHP4-208ENST00000478423 PLAUP00749 431 aa12.03□□□□□ -0.48
NPHP4-208ENST00000478423 UCP1P25874 307 aa12.03□□□□□ -0.48
NPHP4-208ENST00000478423 ID4P47928 161 aa12.03□□□□□ -0.48
NPHP4-208ENST00000478423 FHITP49789 147 aa12.03□□□□□ -0.48
NPHP4-208ENST00000478423 MEF2BQ02080 365 aaPredicted RBP12.03□□□□□ -0.48
NPHP4-208ENST00000478423 FAM74A3Q4VXF1 159 aa12.03□□□□□ -0.48
NPHP4-208ENST00000478423 OR4C13Q8NGP0 309 aa12.03□□□□□ -0.48
NPHP4-208ENST00000478423 MYLKQ15746 1914 aa12.03□□□□□ -0.48
NPHP4-208ENST00000478423 PGA5P0DJD9 388 aa12.03□□□□□ -0.48
NPHP4-208ENST00000478423 SMIM17P0DL12 118 aa12.03□□□□□ -0.48
NPHP4-208ENST00000478423 PUSL1Q8N0Z8 303 aaKnown RBP12.03□□□□□ -0.48
NPHP4-208ENST00000478423 NABP1Q96AH0 204 aa12.03□□□□□ -0.48
NPHP4-208ENST00000478423 SH3BGRL3Q9H299 93 aa12.03□□□□□ -0.48
NPHP4-208ENST00000478423 RALYQ9UKM9 306 aaKnown RBP12.03□□□□□ -0.48
NPHP4-208ENST00000478423 DNASE2O00115 360 aaPredicted RBP12.03□□□□□ -0.48
NPHP4-208ENST00000478423 RND2P52198 227 aa12.03□□□□□ -0.48
NPHP4-208ENST00000478423 GFRA1P56159 465 aa12.03□□□□□ -0.48
NPHP4-208ENST00000478423 SELENOTP62341 195 aa12.03□□□□□ -0.48
NPHP4-208ENST00000478423 FAM209AQ5JX71 171 aa12.03□□□□□ -0.48
NPHP4-208ENST00000478423 RAB24Q969Q5 203 aa12.03□□□□□ -0.48
NPHP4-208ENST00000478423 SEC14L6B5MCN3 397 aa12.03□□□□□ -0.48
NPHP4-208ENST00000478423 SRSF10O75494 262 aaKnown RBP12.03□□□□□ -0.48
NPHP4-208ENST00000478423 USF1P22415 310 aaPredicted RBP12.03□□□□□ -0.48
NPHP4-208ENST00000478423 FAM89BQ8N5H3 189 aa12.03□□□□□ -0.48
NPHP4-208ENST00000478423 ANAPC16Q96DE5 110 aa12.03□□□□□ -0.48
NPHP4-208ENST00000478423 STARD4Q96DR4 205 aa12.03□□□□□ -0.48
NPHP4-208ENST00000478423 PLSCR2Q9NRY7 297 aa12.03□□□□□ -0.48
NPHP4-208ENST00000478423 TLNRD1Q9H1K6 362 aa12.02□□□□□ -0.48
NPHP4-208ENST00000478423 MIOXQ9UGB7 285 aa12.02□□□□□ -0.48
NPHP4-208ENST00000478423 NAGKQ9UJ70 344 aa12.02□□□□□ -0.48
NPHP4-208ENST00000478423 NUBP1P53384 320 aa12.02□□□□□ -0.49
NPHP4-208ENST00000478423 LDLRAD3Q86YD5 345 aa12.02□□□□□ -0.49
NPHP4-208ENST00000478423 PAXXQ9BUH6 204 aa12.02□□□□□ -0.49
NPHP4-208ENST00000478423 ARL2-SNX15V9GYD0 113 aa12.02□□□□□ -0.49
NPHP4-208ENST00000478423 PLAURQ03405 335 aa12.02□□□□□ -0.49
NPHP4-208ENST00000478423 FOXF2Q12947 444 aa12.02□□□□□ -0.49
NPHP4-208ENST00000478423 DHRS11Q6UWP2 260 aa12.02□□□□□ -0.49
NPHP4-208ENST00000478423 ZCCHC24Q8N2G6 241 aaKnown RBP12.02□□□□□ -0.49
NPHP4-208ENST00000478423 TMEM186Q96B77 213 aa12.02□□□□□ -0.49
NPHP4-208ENST00000478423 RSPO3Q9BXY4 272 aaPredicted RBP12.02□□□□□ -0.49
NPHP4-208ENST00000478423 LIPFP07098 398 aa12.01□□□□□ -0.49
NPHP4-208ENST00000478423 RNASEKQ6P5S7 137 aaKnown RBP12.01□□□□□ -0.49
NPHP4-208ENST00000478423 NDUFB4O95168 129 aa12.01□□□□□ -0.49
NPHP4-208ENST00000478423 MRPL54Q6P161 138 aaKnown RBP12.01□□□□□ -0.49
NPHP4-208ENST00000478423 OR5R1Q8NH85 324 aa12.01□□□□□ -0.49
NPHP4-208ENST00000478423 SMIM8Q96KF7 97 aa12.01□□□□□ -0.49
NPHP4-208ENST00000478423 CLEC7AQ9BXN2 247 aa12.01□□□□□ -0.49
NPHP4-208ENST00000478423 AP4M1O00189 453 aa12.01□□□□□ -0.49
NPHP4-208ENST00000478423 IGHV3-48P01763 117 aa12.01□□□□□ -0.49
NPHP4-208ENST00000478423 LAMTOR1Q6IAA8 161 aa12.01□□□□□ -0.49
NPHP4-208ENST00000478423 QTRT1Q9BXR0 403 aaKnown RBP12.01□□□□□ -0.49
NPHP4-208ENST00000478423 P01737 135 aa12.01□□□□□ -0.49
NPHP4-208ENST00000478423 CRISP2P16562 243 aa12.01□□□□□ -0.49
NPHP4-208ENST00000478423 ATP5J2P56134 94 aa12.01□□□□□ -0.49
NPHP4-208ENST00000478423 PMS2P11Q13670 270 aa12.01□□□□□ -0.49
NPHP4-208ENST00000478423 TMEM30BQ3MIR4 351 aa12.01□□□□□ -0.49
NPHP4-208ENST00000478423 PNKDQ8N490 385 aa12.01□□□□□ -0.49
NPHP4-208ENST00000478423 PLPPR1Q8TBJ4 325 aa12.01□□□□□ -0.49
NPHP4-208ENST00000478423 TMPRSS5Q9H3S3 457 aa12.01□□□□□ -0.49
NPHP4-208ENST00000478423 RAXQ9Y2V3 346 aa12.01□□□□□ -0.49
NPHP4-208ENST00000478423 SCN8AQ9UQD0 1980 aa12.01□□□□□ -0.49
NPHP4-208ENST00000478423 FAM74A7A6NL05 159 aa12□□□□□ -0.49
NPHP4-208ENST00000478423 CORTO00230 105 aa12□□□□□ -0.49
NPHP4-208ENST00000478423 ZNF253O75346 499 aa12□□□□□ -0.49
NPHP4-208ENST00000478423 FAM106CPP0CH98 169 aa12□□□□□ -0.49
NPHP4-208ENST00000478423 NCMAPQ5T1S8 102 aa12□□□□□ -0.49
NPHP4-208ENST00000478423 WDR73Q6P4I2 378 aa12□□□□□ -0.49
NPHP4-208ENST00000478423 TOMM20LQ6UXN7 152 aa12□□□□□ -0.49
NPHP4-208ENST00000478423 SPACA3Q8IXA5 215 aa12□□□□□ -0.49
NPHP4-208ENST00000478423 MS4A10Q96PG2 267 aa12□□□□□ -0.49
NPHP4-208ENST00000478423 LOC105371242A0A075B767 164 aa12□□□□□ -0.49
NPHP4-208ENST00000478423 IGKV1-12A0A0C4DH73 117 aa12□□□□□ -0.49
NPHP4-208ENST00000478423 C17orf100A8MU93 164 aa12□□□□□ -0.49
NPHP4-208ENST00000478423 C17orf98A8MV24 154 aa12□□□□□ -0.49
NPHP4-208ENST00000478423 IGKV1D-12P01611 117 aa12□□□□□ -0.49
NPHP4-208ENST00000478423 AMTP48728 403 aa12□□□□□ -0.49
NPHP4-208ENST00000478423 PRSS3P2Q8NHM4 247 aa12□□□□□ -0.49
NPHP4-208ENST00000478423 HIGD1AQ9Y241 93 aa12□□□□□ -0.49
NPHP4-208ENST00000478423 OR2J3O76001 311 aa12□□□□□ -0.49
NPHP4-208ENST00000478423 SGMS2Q8NHU3 365 aa12□□□□□ -0.49
NPHP4-208ENST00000478423 C5orf63A6NC05 138 aa12□□□□□ -0.49
NPHP4-208ENST00000478423 DLL1O00548 723 aa12□□□□□ -0.49
NPHP4-208ENST00000478423 PQLC2Q6ZP29 291 aa12□□□□□ -0.49
NPHP4-208ENST00000478423 OR5AU1Q8NGC0 362 aa12□□□□□ -0.49
NPHP4-208ENST00000478423 HELZP42694 1942 aaKnown RBP11.99□□□□□ -0.49
NPHP4-208ENST00000478423 TICRRQ7Z2Z1 1910 aa11.99□□□□□ -0.49
NPHP4-208ENST00000478423 IGKV1D-8A0A087WSZ0 117 aa11.99□□□□□ -0.49
NPHP4-208ENST00000478423 A0A0A6YYD4 124 aa11.99□□□□□ -0.49
NPHP4-208ENST00000478423 IGKV1D-13A0A0B4J2D9 117 aa11.99□□□□□ -0.49
NPHP4-208ENST00000478423 IGSF23A1L1A6 192 aa11.99□□□□□ -0.49
NPHP4-208ENST00000478423 DANCRP0C864 163 aa11.99□□□□□ -0.49
NPHP4-208ENST00000478423 IGKV1-13P0DP09 117 aa11.99□□□□□ -0.49
NPHP4-208ENST00000478423 COX6B1P14854 86 aa11.99□□□□□ -0.49
NPHP4-208ENST00000478423 FCER1GP30273 86 aa11.99□□□□□ -0.49
NPHP4-208ENST00000478423 C1QTNF12Q5T7M4 302 aa11.99□□□□□ -0.49
NPHP4-208ENST00000478423 RPRMQ9NS64 109 aa11.99□□□□□ -0.49
NPHP4-208ENST00000478423 MFSD2BA6NFX1 497 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms