RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 Q6ZS92 163 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 Q6ZVL8 140 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 OLIG3Q7RTU3 272 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 ERASQ7Z444 233 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 HSD11B1LQ7Z5J1 315 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 HMGN2P46Q86SG4 172 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 SELENOHQ8IZQ5 122 aaKnown RBP3.96□□□□□ -1.78
PTCD3-212ENST00000477520 TMEM105Q8N8V8 129 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 OR8B3Q8NGG8 313 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 OR10V1Q8NGI7 309 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 OR52M1Q8NGK5 317 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 OR5D13Q8NGL4 314 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 OR5AR1Q8NGP9 310 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 OR1N2Q8NGR9 330 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 OR4F5Q8NH21 305 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 CT45A3Q8NHU0 189 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 VSTM2AQ8TAG5 236 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 C18orf32Q8TCD1 76 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 RNF133Q8WVZ7 376 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 PP6455Q8WZ26 134 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 DAZLQ92904 295 aaKnown RBP3.96□□□□□ -1.78
PTCD3-212ENST00000477520 LSM10Q969L4 123 aaKnown RBP3.96□□□□□ -1.78
PTCD3-212ENST00000477520 FAM131CQ96AQ9 280 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 GRAMD2BQ96HH9 432 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 ARHGAP5-AS1Q96IT6 56 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 BMFQ96LC9 184 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 OR2A5Q96R48 311 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 OR8B2Q96RD0 313 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 TMEM70Q9BUB7 260 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 APOOQ9BUR5 198 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 LRRC61Q9BV99 259 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 SPANXDQ9BXN6 97 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 QTRT1Q9BXR0 403 aaKnown RBP3.96□□□□□ -1.78
PTCD3-212ENST00000477520 KCNK15Q9H427 330 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 WSB2Q9NYS7 404 aaPredicted RBP3.96□□□□□ -1.78
PTCD3-212ENST00000477520 TAAR3PQ9P1P4 343 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 NAT8BQ9UHF3 227 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 TP53TG3Q9ULZ0 132 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 UBE2J1Q9Y385 318 aaPredicted RBP3.96□□□□□ -1.78
PTCD3-212ENST00000477520 WASHC3Q9Y3C0 194 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 HEBP2Q9Y5Z4 205 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 EP300Q09472 2414 aaPredicted RBP3.96□□□□□ -1.78
PTCD3-212ENST00000477520 PLXNA2O75051 1894 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 MDC1Q14676 2089 aaKnown RBP3.96□□□□□ -1.78
PTCD3-212ENST00000477520 FAM186AA6NE01 2351 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 TRAV36DV7A0A075B6V5 113 aa3.95□□□□□ -1.78
PTCD3-212ENST00000477520 A0A1B0GTH9 108 aa3.95□□□□□ -1.78
PTCD3-212ENST00000477520 A0A1W2PPV9 198 aa3.95□□□□□ -1.78
PTCD3-212ENST00000477520 A0A1W2PS18 150 aa3.95□□□□□ -1.78
PTCD3-212ENST00000477520 hADV38S2A0JD32 116 aa3.95□□□□□ -1.78
PTCD3-212ENST00000477520 C7orf71A4D174 169 aa3.95□□□□□ -1.78
PTCD3-212ENST00000477520 GAGE12HA6NDE8 117 aa3.95□□□□□ -1.78
PTCD3-212ENST00000477520 IGLON5A6NGN9 336 aa3.95□□□□□ -1.78
PTCD3-212ENST00000477520 ALG1L2C9J202 215 aa3.95□□□□□ -1.78
PTCD3-212ENST00000477520 H0Y980 276 aa3.95□□□□□ -1.78
PTCD3-212ENST00000477520 GNG7O60262 68 aa3.95□□□□□ -1.78
PTCD3-212ENST00000477520 MPDU1O75352 247 aa3.95□□□□□ -1.78
PTCD3-212ENST00000477520 HSBP1O75506 76 aa3.95□□□□□ -1.78
PTCD3-212ENST00000477520 CA2P00918 260 aa3.95□□□□□ -1.78
PTCD3-212ENST00000477520 IGHG4P01861 327 aa3.95□□□□□ -1.78
PTCD3-212ENST00000477520 TTRP02766 147 aa3.95□□□□□ -1.78
PTCD3-212ENST00000477520 C8orf89P0DMQ9 161 aa3.95□□□□□ -1.78
PTCD3-212ENST00000477520 SMIM10L1P0DMW3 83 aa3.95□□□□□ -1.78
PTCD3-212ENST00000477520 CD27P26842 260 aa3.95□□□□□ -1.78
PTCD3-212ENST00000477520 S100A7P31151 101 aa3.95□□□□□ -1.78
PTCD3-212ENST00000477520 SSTR5P35346 364 aa3.95□□□□□ -1.78
PTCD3-212ENST00000477520 ARL3P36405 182 aa3.95□□□□□ -1.78
PTCD3-212ENST00000477520 DAP3P51398 398 aaKnown RBP3.95□□□□□ -1.78
PTCD3-212ENST00000477520 LGALS4P56470 323 aa3.95□□□□□ -1.78
PTCD3-212ENST00000477520 UBE2G1P62253 170 aa3.95□□□□□ -1.78
PTCD3-212ENST00000477520 CX3CL1P78423 397 aa3.95□□□□□ -1.78
PTCD3-212ENST00000477520 DUSP2Q05923 314 aa3.95□□□□□ -1.78
PTCD3-212ENST00000477520 LTC4SQ16873 150 aa3.95□□□□□ -1.78
PTCD3-212ENST00000477520 BEAN1Q3B7T3 259 aa3.95□□□□□ -1.78
PTCD3-212ENST00000477520 CEACAM21Q3KPI0 293 aa3.95□□□□□ -1.78
PTCD3-212ENST00000477520 MPV17L2Q567V2 206 aa3.95□□□□□ -1.78
PTCD3-212ENST00000477520 TMEM97Q5BJF2 176 aa3.95□□□□□ -1.78
PTCD3-212ENST00000477520 NMSQ5H8A3 153 aa3.95□□□□□ -1.78
PTCD3-212ENST00000477520 SPATA46Q5T0L3 261 aa3.95□□□□□ -1.78
PTCD3-212ENST00000477520 PRAMEF5Q5TYX0 476 aa3.95□□□□□ -1.78
PTCD3-212ENST00000477520 PRAMEF6Q5VXH4 476 aa3.95□□□□□ -1.78
PTCD3-212ENST00000477520 Q6ZSR3 168 aa3.95□□□□□ -1.78
PTCD3-212ENST00000477520 Q6ZSR6 202 aa3.95□□□□□ -1.78
PTCD3-212ENST00000477520 LINC00346Q8IVM7 164 aa3.95□□□□□ -1.78
PTCD3-212ENST00000477520 ZNF525Q8N782 197 aa3.95□□□□□ -1.78
PTCD3-212ENST00000477520 ZNF439Q8NDP4 499 aa3.95□□□□□ -1.78
PTCD3-212ENST00000477520 OR2Z1Q8NG97 314 aa3.95□□□□□ -1.78
PTCD3-212ENST00000477520 OR9G4Q8NGQ1 327 aa3.95□□□□□ -1.78
PTCD3-212ENST00000477520 OR2A1Q8NGT9 310 aa3.95□□□□□ -1.78
PTCD3-212ENST00000477520 OR4A16Q8NH70 328 aa3.95□□□□□ -1.78
PTCD3-212ENST00000477520 OR2AE1Q8NHA4 323 aa3.95□□□□□ -1.78
PTCD3-212ENST00000477520 ZPLD1Q8TCW7 415 aa3.95□□□□□ -1.78
PTCD3-212ENST00000477520 ZNF721Q8TF20 911 aa3.95□□□□□ -1.78
PTCD3-212ENST00000477520 ZNF418Q8TF45 676 aaPredicted RBP3.95□□□□□ -1.78
PTCD3-212ENST00000477520 WIPF2Q8TF74 440 aaPredicted RBP3.95□□□□□ -1.78
PTCD3-212ENST00000477520 SSC4DQ8WTU2 575 aa3.95□□□□□ -1.78
PTCD3-212ENST00000477520 RLN3Q8WXF3 142 aa3.95□□□□□ -1.78
PTCD3-212ENST00000477520 TAF15Q92804 592 aaKnown RBP eCLIP3.95□□□□□ -1.78
PTCD3-212ENST00000477520 SCAMP4Q969E2 229 aa3.95□□□□□ -1.78
PTCD3-212ENST00000477520 CHCHD1Q96BP2 118 aaKnown RBP3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms