RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 FOXI3A8MTJ6 420 aaPredicted RBP12.16□□□□□ -0.46
APOBEC3F-203ENST00000476513 ACTL6BO94805 426 aa12.16□□□□□ -0.46
APOBEC3F-203ENST00000476513 SAA1P0DJI8 122 aaPredicted RBP12.16□□□□□ -0.46
APOBEC3F-203ENST00000476513 SERPINB10P48595 397 aa12.16□□□□□ -0.46
APOBEC3F-203ENST00000476513 RASSF2P50749 326 aa12.16□□□□□ -0.46
APOBEC3F-203ENST00000476513 TMEM50BP56557 158 aa12.16□□□□□ -0.46
APOBEC3F-203ENST00000476513 TTC23Q5W5X9 447 aa12.16□□□□□ -0.46
APOBEC3F-203ENST00000476513 OR4A47Q6IF82 309 aa12.16□□□□□ -0.46
APOBEC3F-203ENST00000476513 RBPMS2Q6ZRY4 209 aaKnown RBP12.16□□□□□ -0.46
APOBEC3F-203ENST00000476513 FAM89BQ8N5H3 189 aa12.16□□□□□ -0.46
APOBEC3F-203ENST00000476513 OR4A4PQ8NGN8 299 aa12.16□□□□□ -0.46
APOBEC3F-203ENST00000476513 FBLIM1Q8WUP2 373 aa12.16□□□□□ -0.46
APOBEC3F-203ENST00000476513 CMSS1Q9BQ75 279 aaKnown RBP12.16□□□□□ -0.46
APOBEC3F-203ENST00000476513 HSF4Q9ULV5 492 aa12.16□□□□□ -0.46
APOBEC3F-203ENST00000476513 BET1O15155 118 aa12.15□□□□□ -0.46
APOBEC3F-203ENST00000476513 BPNT1O95861 308 aa12.15□□□□□ -0.46
APOBEC3F-203ENST00000476513 C8orf88P0DMB2 117 aa12.15□□□□□ -0.46
APOBEC3F-203ENST00000476513 CTRB1P17538 263 aa12.15□□□□□ -0.46
APOBEC3F-203ENST00000476513 DUTP33316 252 aaKnown RBP12.15□□□□□ -0.46
APOBEC3F-203ENST00000476513 TPBGQ13641 420 aa12.15□□□□□ -0.46
APOBEC3F-203ENST00000476513 CDK10Q15131 360 aa12.15□□□□□ -0.46
APOBEC3F-203ENST00000476513 IGSF11Q5DX21 431 aa12.15□□□□□ -0.46
APOBEC3F-203ENST00000476513 CTRB2Q6GPI1 263 aa12.15□□□□□ -0.46
APOBEC3F-203ENST00000476513 UNQ9165/PRO28630Q6UXU0 137 aa12.15□□□□□ -0.46
APOBEC3F-203ENST00000476513 MMD2Q8IY49 270 aa12.15□□□□□ -0.46
APOBEC3F-203ENST00000476513 SLC38A6Q8IZM9 456 aa12.15□□□□□ -0.46
APOBEC3F-203ENST00000476513 OSR1Q8TAX0 266 aaPredicted RBP12.15□□□□□ -0.46
APOBEC3F-203ENST00000476513 ARHGAP5-AS1Q96IT6 56 aa12.15□□□□□ -0.46
APOBEC3F-203ENST00000476513 FANCD2OSQ96PS1 177 aa12.15□□□□□ -0.46
APOBEC3F-203ENST00000476513 URM1Q9BTM9 101 aaKnown RBP12.15□□□□□ -0.46
APOBEC3F-203ENST00000476513 C9orf16Q9BUW7 83 aa12.15□□□□□ -0.46
APOBEC3F-203ENST00000476513 DNAH6Q9C0G6 4158 aa12.15□□□□□ -0.47
APOBEC3F-203ENST00000476513 LINC00473A8K010 186 aa12.14□□□□□ -0.47
APOBEC3F-203ENST00000476513 TEX22C9J3V5 150 aa12.14□□□□□ -0.47
APOBEC3F-203ENST00000476513 FABP7O15540 132 aa12.14□□□□□ -0.47
APOBEC3F-203ENST00000476513 CREBL2O60519 120 aaPredicted RBP12.14□□□□□ -0.47
APOBEC3F-203ENST00000476513 MED14OSP0DP75 135 aa12.14□□□□□ -0.47
APOBEC3F-203ENST00000476513 CD37P11049 281 aa12.14□□□□□ -0.47
APOBEC3F-203ENST00000476513 NANOS2P60321 138 aaKnown RBP12.14□□□□□ -0.47
APOBEC3F-203ENST00000476513 ZNF585BQ52M93 769 aa12.14□□□□□ -0.47
APOBEC3F-203ENST00000476513 ACSM3Q53FZ2 586 aa12.14□□□□□ -0.47
APOBEC3F-203ENST00000476513 RBM48Q5RL73 367 aaKnown RBP12.14□□□□□ -0.47
APOBEC3F-203ENST00000476513 PHYHIPQ92561 330 aa12.14□□□□□ -0.47
APOBEC3F-203ENST00000476513 MARC2Q969Z3 335 aa12.14□□□□□ -0.47
APOBEC3F-203ENST00000476513 ADTRPQ96IZ2 230 aa12.14□□□□□ -0.47
APOBEC3F-203ENST00000476513 CABLES2Q9BTV7 478 aa12.14□□□□□ -0.47
APOBEC3F-203ENST00000476513 FBXL17Q9UF56 701 aa12.14□□□□□ -0.47
APOBEC3F-203ENST00000476513 ABCA13Q86UQ4 5058 aa12.14□□□□□ -0.47
APOBEC3F-203ENST00000476513 TRBV6-7A0A0A0MS04 114 aa12.13□□□□□ -0.47
APOBEC3F-203ENST00000476513 EFCAB10A6NFE3 127 aa12.13□□□□□ -0.47
APOBEC3F-203ENST00000476513 NPIPB5A8MRT5 1133 aa12.13□□□□□ -0.47
APOBEC3F-203ENST00000476513 RPL35AP18077 110 aaKnown RBP12.13□□□□□ -0.47
APOBEC3F-203ENST00000476513 FCGR2BP31994 310 aaPredicted RBP12.13□□□□□ -0.47
APOBEC3F-203ENST00000476513 ST3GAL4Q11206 333 aa12.13□□□□□ -0.47
APOBEC3F-203ENST00000476513 RBMS2Q15434 407 aaKnown RBP12.13□□□□□ -0.47
APOBEC3F-203ENST00000476513 ODF3L2Q3SX64 289 aa12.13□□□□□ -0.47
APOBEC3F-203ENST00000476513 OR10J5Q8NHC4 309 aa12.13□□□□□ -0.47
APOBEC3F-203ENST00000476513 EEF1AKMT3Q96AZ1 226 aa12.13□□□□□ -0.47
APOBEC3F-203ENST00000476513 SPAG8Q99932 426 aaPredicted RBP12.13□□□□□ -0.47
APOBEC3F-203ENST00000476513 PECRQ9BY49 303 aa12.13□□□□□ -0.47
APOBEC3F-203ENST00000476513 MRPL27Q9P0M9 148 aaKnown RBP12.13□□□□□ -0.47
APOBEC3F-203ENST00000476513 A0A1B0GVY2 172 aa12.12□□□□□ -0.47
APOBEC3F-203ENST00000476513 S1PR2O95136 353 aa12.12□□□□□ -0.47
APOBEC3F-203ENST00000476513 IFNA4P05014 189 aa12.12□□□□□ -0.47
APOBEC3F-203ENST00000476513 IL6RP08887 468 aaPredicted RBP12.12□□□□□ -0.47
APOBEC3F-203ENST00000476513 P2RY14Q15391 338 aa12.12□□□□□ -0.47
APOBEC3F-203ENST00000476513 ZFP1Q6P2D0 407 aa12.12□□□□□ -0.47
APOBEC3F-203ENST00000476513 LINC00336Q6ZUF6 198 aa12.12□□□□□ -0.47
APOBEC3F-203ENST00000476513 ZNF555Q8NEP9 628 aa12.12□□□□□ -0.47
APOBEC3F-203ENST00000476513 OR6M1Q8NGM8 313 aa12.12□□□□□ -0.47
APOBEC3F-203ENST00000476513 C11orf45Q8TAV5 145 aa12.12□□□□□ -0.47
APOBEC3F-203ENST00000476513 MFFQ9GZY8 342 aa12.12□□□□□ -0.47
APOBEC3F-203ENST00000476513 C5orf66Q9H5L9 145 aa12.12□□□□□ -0.47
APOBEC3F-203ENST00000476513 MAP6D1Q9H9H5 199 aa12.12□□□□□ -0.47
APOBEC3F-203ENST00000476513 SLC2A9Q9NRM0 540 aa12.12□□□□□ -0.47
APOBEC3F-203ENST00000476513 RBM7Q9Y580 266 aaKnown RBP12.12□□□□□ -0.47
APOBEC3F-203ENST00000476513 FAT2Q9NYQ8 4349 aa12.11□□□□□ -0.47
APOBEC3F-203ENST00000476513 A0A1B0GW64 132 aa12.11□□□□□ -0.47
APOBEC3F-203ENST00000476513 DPPA5A6NC42 116 aa12.11□□□□□ -0.47
APOBEC3F-203ENST00000476513 E7EUB6 86 aa12.11□□□□□ -0.47
APOBEC3F-203ENST00000476513 ATP5HO75947 161 aa12.11□□□□□ -0.47
APOBEC3F-203ENST00000476513 CLEC3BP05452 202 aa12.11□□□□□ -0.47
APOBEC3F-203ENST00000476513 GSTT2P0CG29 244 aa12.11□□□□□ -0.47
APOBEC3F-203ENST00000476513 GSTT2BP0CG30 244 aa12.11□□□□□ -0.47
APOBEC3F-203ENST00000476513 GALP22466 123 aa12.11□□□□□ -0.47
APOBEC3F-203ENST00000476513 WNT4P56705 351 aa12.11□□□□□ -0.47
APOBEC3F-203ENST00000476513 PLAC9Q5JTB6 97 aa12.11□□□□□ -0.47
APOBEC3F-203ENST00000476513 SETD9Q8NE22 299 aa12.11□□□□□ -0.47
APOBEC3F-203ENST00000476513 C2CD4CQ8TF44 421 aa12.11□□□□□ -0.47
APOBEC3F-203ENST00000476513 RRP15Q9Y3B9 282 aaKnown RBP12.11□□□□□ -0.47
APOBEC3F-203ENST00000476513 TSPAN4O14817 238 aa12.1□□□□□ -0.47
APOBEC3F-203ENST00000476513 DIRAS3O95661 229 aa12.1□□□□□ -0.47
APOBEC3F-203ENST00000476513 CRYGCP07315 174 aa12.1□□□□□ -0.47
APOBEC3F-203ENST00000476513 AREGP15514 252 aa12.1□□□□□ -0.47
APOBEC3F-203ENST00000476513 PSMB6P28072 239 aa12.1□□□□□ -0.47
APOBEC3F-203ENST00000476513 RPL27AP46776 148 aaKnown RBP12.1□□□□□ -0.47
APOBEC3F-203ENST00000476513 TCTAP57738 103 aa12.1□□□□□ -0.47
APOBEC3F-203ENST00000476513 MED22Q15528 200 aa12.1□□□□□ -0.47
APOBEC3F-203ENST00000476513 KLK9Q2XQG4 91 aa12.1□□□□□ -0.47
APOBEC3F-203ENST00000476513 VKORC1L1Q8N0U8 176 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms