RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 TAAR3PQ9P1P4 343 aa1.1□□□□□ -2.23
LTN1-204ENST00000475344 POLR3HQ9Y535 204 aaPredicted RBP1.1□□□□□ -2.23
LTN1-204ENST00000475344 RGS12O14924 1447 aa1.09□□□□□ -2.23
LTN1-204ENST00000475344 NUP160Q12769 1436 aa1.09□□□□□ -2.23
LTN1-204ENST00000475344 TMED7-TICAM2A0A0A6YYA0 188 aa1.09□□□□□ -2.23
LTN1-204ENST00000475344 ZNF705FA8MVS1 300 aaPredicted RBP1.09□□□□□ -2.23
LTN1-204ENST00000475344 TXNDC9O14530 226 aa1.09□□□□□ -2.23
LTN1-204ENST00000475344 APOMO95445 188 aa1.09□□□□□ -2.23
LTN1-204ENST00000475344 YEATS4O95619 227 aa1.09□□□□□ -2.23
LTN1-204ENST00000475344 CXCR4P61073 352 aa1.09□□□□□ -2.23
LTN1-204ENST00000475344 AP1S1P61966 158 aa1.09□□□□□ -2.23
LTN1-204ENST00000475344 AKR1C1Q04828 323 aa1.09□□□□□ -2.23
LTN1-204ENST00000475344 MIAQ16674 131 aa1.09□□□□□ -2.23
LTN1-204ENST00000475344 SAPCD1Q5SSQ6 148 aa1.09□□□□□ -2.23
LTN1-204ENST00000475344 TMEM42Q69YG0 159 aa1.09□□□□□ -2.23
LTN1-204ENST00000475344 LYZL1Q6UWQ5 148 aa1.09□□□□□ -2.23
LTN1-204ENST00000475344 COA5Q86WW8 74 aa1.09□□□□□ -2.23
LTN1-204ENST00000475344 OR8B12Q8NGG6 310 aa1.09□□□□□ -2.23
LTN1-204ENST00000475344 OR13C8Q8NGS7 320 aa1.09□□□□□ -2.23
LTN1-204ENST00000475344 SPACA4Q8TDM5 124 aa1.09□□□□□ -2.23
LTN1-204ENST00000475344 SLC7A6Q92536 515 aa1.09□□□□□ -2.23
LTN1-204ENST00000475344 C12orf43Q96C57 262 aaKnown RBP1.09□□□□□ -2.23
LTN1-204ENST00000475344 SFRP2Q96HF1 295 aa1.09□□□□□ -2.23
LTN1-204ENST00000475344 NAA38Q9BRA0 125 aaKnown RBP1.09□□□□□ -2.23
LTN1-204ENST00000475344 TMEM109Q9BVC6 243 aa1.09□□□□□ -2.23
LTN1-204ENST00000475344 CYSTM1Q9H1C7 97 aa1.09□□□□□ -2.23
LTN1-204ENST00000475344 CPAMD8Q8IZJ3 1885 aa1.09□□□□□ -2.24
LTN1-204ENST00000475344 MED12LQ86YW9 2145 aa1.09□□□□□ -2.24
LTN1-204ENST00000475344 REREQ9P2R6 1566 aa1.08□□□□□ -2.24
LTN1-204ENST00000475344 CETN3O15182 167 aa1.08□□□□□ -2.24
LTN1-204ENST00000475344 SSNA1O43805 119 aa1.08□□□□□ -2.24
LTN1-204ENST00000475344 NAPSAO96009 420 aa1.08□□□□□ -2.24
LTN1-204ENST00000475344 REG1AP05451 166 aa1.08□□□□□ -2.24
LTN1-204ENST00000475344 HLA-DQB2P05538 268 aa1.08□□□□□ -2.24
LTN1-204ENST00000475344 BPGMP07738 259 aa1.08□□□□□ -2.24
LTN1-204ENST00000475344 PSMB8P28062 276 aa1.08□□□□□ -2.24
LTN1-204ENST00000475344 ALDH3A1P30838 453 aa1.08□□□□□ -2.24
LTN1-204ENST00000475344 CDC34P49427 236 aaPredicted RBP1.08□□□□□ -2.24
LTN1-204ENST00000475344 EMP2P54851 167 aa1.08□□□□□ -2.24
LTN1-204ENST00000475344 TMEM258P61165 79 aa1.08□□□□□ -2.24
LTN1-204ENST00000475344 PPP1R1AQ13522 171 aa1.08□□□□□ -2.24
LTN1-204ENST00000475344 ZNF791Q3KP31 576 aaPredicted RBP1.08□□□□□ -2.24
LTN1-204ENST00000475344 NAA40Q86UY6 237 aa1.08□□□□□ -2.24
LTN1-204ENST00000475344 ZNF675Q8TD23 568 aa1.08□□□□□ -2.24
LTN1-204ENST00000475344 CMTM5Q96DZ9 223 aa1.08□□□□□ -2.24
LTN1-204ENST00000475344 KCTD7Q96MP8 289 aa1.08□□□□□ -2.24
LTN1-204ENST00000475344 DOHHQ9BU89 302 aa1.08□□□□□ -2.24
LTN1-204ENST00000475344 XAGE1AQ9HD64 81 aa1.08□□□□□ -2.24
LTN1-204ENST00000475344 AMMECR1Q9Y4X0 333 aaPredicted RBP1.08□□□□□ -2.24
LTN1-204ENST00000475344 RP1P56715 2156 aa1.08□□□□□ -2.24
LTN1-204ENST00000475344 ABCC12Q96J65 1359 aa1.08□□□□□ -2.24
LTN1-204ENST00000475344 MYOFQ9NZM1 2061 aa1.08□□□□□ -2.24
LTN1-204ENST00000475344 INTS1Q8N201 2190 aaKnown RBP1.07□□□□□ -2.24
LTN1-204ENST00000475344 A0A1B0GVG6 124 aa1.07□□□□□ -2.24
LTN1-204ENST00000475344 KLRC4O43908 158 aa1.07□□□□□ -2.24
LTN1-204ENST00000475344 HLA-DRAP01903 254 aa1.07□□□□□ -2.24
LTN1-204ENST00000475344 C1QCP02747 245 aa1.07□□□□□ -2.24
LTN1-204ENST00000475344 ANGP03950 147 aaKnown RBP1.07□□□□□ -2.24
LTN1-204ENST00000475344 C8orf88P0DMB2 117 aa1.07□□□□□ -2.24
LTN1-204ENST00000475344 COX5BP10606 129 aa1.07□□□□□ -2.24
LTN1-204ENST00000475344 MAP3K7CLP57077 242 aa1.07□□□□□ -2.24
LTN1-204ENST00000475344 GPHB5Q86YW7 130 aa1.07□□□□□ -2.24
LTN1-204ENST00000475344 TMEM156Q8N614 296 aa1.07□□□□□ -2.24
LTN1-204ENST00000475344 HAVCR2Q8TDQ0 301 aa1.07□□□□□ -2.24
LTN1-204ENST00000475344 EEF1AKMT1Q8WVE0 214 aa1.07□□□□□ -2.24
LTN1-204ENST00000475344 ASB17Q8WXJ9 295 aa1.07□□□□□ -2.24
LTN1-204ENST00000475344 CCL13Q99616 98 aa1.07□□□□□ -2.24
LTN1-204ENST00000475344 SPZ1Q9BXG8 430 aa1.07□□□□□ -2.24
LTN1-204ENST00000475344 HDHD2Q9H0R4 259 aa1.07□□□□□ -2.24
LTN1-204ENST00000475344 ZNHIT6Q9NWK9 470 aaKnown RBP1.07□□□□□ -2.24
LTN1-204ENST00000475344 POLR1DQ9Y2S0 133 aa1.07□□□□□ -2.24
LTN1-204ENST00000475344 CCDC88AQ3V6T2 1871 aa1.07□□□□□ -2.24
LTN1-204ENST00000475344 MICAL3Q7RTP6 2002 aa1.06□□□□□ -2.24
LTN1-204ENST00000475344 A0A0A6YYH2 397 aa1.06□□□□□ -2.24
LTN1-204ENST00000475344 A0A0J9YW62 118 aa1.06□□□□□ -2.24
LTN1-204ENST00000475344 A6NJ64 397 aa1.06□□□□□ -2.24
LTN1-204ENST00000475344 RFPL4AA6NLU0 287 aa1.06□□□□□ -2.24
LTN1-204ENST00000475344 RFPL4AL1F8VTS6 287 aa1.06□□□□□ -2.24
LTN1-204ENST00000475344 TYMSP04818 313 aa1.06□□□□□ -2.24
LTN1-204ENST00000475344 SERPINA7P05543 415 aa1.06□□□□□ -2.24
LTN1-204ENST00000475344 TPM3P06753 285 aa1.06□□□□□ -2.24
LTN1-204ENST00000475344 IL3P08700 152 aa1.06□□□□□ -2.24
LTN1-204ENST00000475344 ZNF705DP0CH99 300 aaPredicted RBP1.06□□□□□ -2.24
LTN1-204ENST00000475344 ZNF705BP0CI00 300 aaPredicted RBP1.06□□□□□ -2.24
LTN1-204ENST00000475344 CA5AP35218 305 aa1.06□□□□□ -2.24
LTN1-204ENST00000475344 BLVRAP53004 296 aa1.06□□□□□ -2.24
LTN1-204ENST00000475344 TPI1P60174 286 aa1.06□□□□□ -2.24
LTN1-204ENST00000475344 SLC36A2Q495M3 483 aa1.06□□□□□ -2.24
LTN1-204ENST00000475344 FAM78BQ5VT40 261 aa1.06□□□□□ -2.24
LTN1-204ENST00000475344 SBSNQ6UWP8 590 aa1.06□□□□□ -2.24
LTN1-204ENST00000475344 FAM151BQ6UXP7 276 aa1.06□□□□□ -2.24
LTN1-204ENST00000475344 UBL4BQ8N7F7 174 aa1.06□□□□□ -2.24
LTN1-204ENST00000475344 OR1L8Q8NGR8 309 aa1.06□□□□□ -2.24
LTN1-204ENST00000475344 NMNAT3Q96T66 252 aa1.06□□□□□ -2.24
LTN1-204ENST00000475344 MRPL32Q9BYC8 188 aaKnown RBP1.06□□□□□ -2.24
LTN1-204ENST00000475344 TTTY13Q9BZ97 58 aa1.06□□□□□ -2.24
LTN1-204ENST00000475344 VCX3BQ9H321 246 aa1.06□□□□□ -2.24
LTN1-204ENST00000475344 C15orf41Q9Y2V0 281 aa1.06□□□□□ -2.24
LTN1-204ENST00000475344 TIMM9Q9Y5J7 89 aa1.06□□□□□ -2.24
LTN1-204ENST00000475344 ATP6V1DQ9Y5K8 247 aa1.06□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms