RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 RAB40CQ96S21 281 aa11.14□□□□□ -0.63
TRAF4-210ENST00000475329 ARPC5LQ9BPX5 153 aa11.14□□□□□ -0.63
TRAF4-210ENST00000475329 MMP26Q9NRE1 261 aa11.14□□□□□ -0.63
TRAF4-210ENST00000475329 TMEM140Q9NV12 185 aa11.14□□□□□ -0.63
TRAF4-210ENST00000475329 USP9YO00507 2555 aaPredicted RBP11.14□□□□□ -0.63
TRAF4-210ENST00000475329 LEUTXA8MZ59 168 aa11.13□□□□□ -0.63
TRAF4-210ENST00000475329 SHOXO15266 292 aa11.13□□□□□ -0.63
TRAF4-210ENST00000475329 SYNGR2O43760 224 aa11.13□□□□□ -0.63
TRAF4-210ENST00000475329 GPR137BO60478 399 aa11.13□□□□□ -0.63
TRAF4-210ENST00000475329 RBMXL2O75526 392 aaKnown RBP11.13□□□□□ -0.63
TRAF4-210ENST00000475329 OR9G9P0C7N8 305 aa11.13□□□□□ -0.63
TRAF4-210ENST00000475329 HTR1DP28221 377 aa11.13□□□□□ -0.63
TRAF4-210ENST00000475329 CEACAM3P40198 252 aa11.13□□□□□ -0.63
TRAF4-210ENST00000475329 TNFRSF9Q07011 255 aa11.13□□□□□ -0.63
TRAF4-210ENST00000475329 DEFB113Q30KQ7 82 aa11.13□□□□□ -0.63
TRAF4-210ENST00000475329 TMEM177Q53S58 311 aa11.13□□□□□ -0.63
TRAF4-210ENST00000475329 TPTE2P1Q5T6R2 138 aa11.13□□□□□ -0.63
TRAF4-210ENST00000475329 GPR157Q5UAW9 335 aa11.13□□□□□ -0.63
TRAF4-210ENST00000475329 HCP5Q6MZN7 132 aa11.13□□□□□ -0.63
TRAF4-210ENST00000475329 SLC51BQ86UW2 128 aa11.13□□□□□ -0.63
TRAF4-210ENST00000475329 VKORC1L1Q8N0U8 176 aa11.13□□□□□ -0.63
TRAF4-210ENST00000475329 OR4A16Q8NH70 328 aa11.13□□□□□ -0.63
TRAF4-210ENST00000475329 HARBI1Q96MB7 349 aa11.13□□□□□ -0.63
TRAF4-210ENST00000475329 LPAR2Q9HBW0 351 aa11.13□□□□□ -0.63
TRAF4-210ENST00000475329 HSPB7Q9UBY9 170 aa11.13□□□□□ -0.63
TRAF4-210ENST00000475329 CACFD1Q9UGQ2 172 aa11.13□□□□□ -0.63
TRAF4-210ENST00000475329 ANKRD17O75179 2603 aaKnown RBP11.13□□□□□ -0.63
TRAF4-210ENST00000475329 IGHV1-3A0A0C4DH29 117 aa11.12□□□□□ -0.63
TRAF4-210ENST00000475329 LY6LH3BQJ8 138 aa11.12□□□□□ -0.63
TRAF4-210ENST00000475329 CHST1O43916 411 aa11.12□□□□□ -0.63
TRAF4-210ENST00000475329 IGKV1-16P04430 117 aa11.12□□□□□ -0.63
TRAF4-210ENST00000475329 USF1P22415 310 aaPredicted RBP11.12□□□□□ -0.63
TRAF4-210ENST00000475329 OR2B8PP59922 312 aa11.12□□□□□ -0.63
TRAF4-210ENST00000475329 RPL23AP62750 156 aaKnown RBP11.12□□□□□ -0.63
TRAF4-210ENST00000475329 UBA52P62987 128 aaKnown RBP11.12□□□□□ -0.63
TRAF4-210ENST00000475329 AARDQ4LEZ3 155 aa11.12□□□□□ -0.63
TRAF4-210ENST00000475329 OR4A47Q6IF82 309 aa11.12□□□□□ -0.63
TRAF4-210ENST00000475329 ZNF767PQ75MW2 155 aa11.12□□□□□ -0.63
TRAF4-210ENST00000475329 OR2C3Q8N628 320 aa11.12□□□□□ -0.63
TRAF4-210ENST00000475329 OR8H1Q8NGG4 311 aa11.12□□□□□ -0.63
TRAF4-210ENST00000475329 OR4C13Q8NGP0 309 aa11.12□□□□□ -0.63
TRAF4-210ENST00000475329 LHX4Q969G2 390 aa11.12□□□□□ -0.63
TRAF4-210ENST00000475329 FLYWCH2Q96CP2 140 aaKnown RBP11.12□□□□□ -0.63
TRAF4-210ENST00000475329 SLC25A31Q9H0C2 315 aa11.12□□□□□ -0.63
TRAF4-210ENST00000475329 LYRM2Q9NU23 88 aaPredicted RBP11.12□□□□□ -0.63
TRAF4-210ENST00000475329 DPM3Q9P2X0 92 aa11.12□□□□□ -0.63
TRAF4-210ENST00000475329 INSIG2Q9Y5U4 225 aa11.12□□□□□ -0.63
TRAF4-210ENST00000475329 WNK2Q9Y3S1 2297 aa11.12□□□□□ -0.63
TRAF4-210ENST00000475329 RNASEK-C17orf49H0YIS7 233 aa11.11□□□□□ -0.63
TRAF4-210ENST00000475329 TAAR5O14804 337 aa11.11□□□□□ -0.63
TRAF4-210ENST00000475329 IFNA7P01567 189 aa11.11□□□□□ -0.63
TRAF4-210ENST00000475329 IAPPP10997 89 aa11.11□□□□□ -0.63
TRAF4-210ENST00000475329 CAV2P51636 162 aa11.11□□□□□ -0.63
TRAF4-210ENST00000475329 TAS2R30P59541 319 aa11.11□□□□□ -0.63
TRAF4-210ENST00000475329 UBE2KP61086 200 aa11.11□□□□□ -0.63
TRAF4-210ENST00000475329 RELBQ01201 579 aa11.11□□□□□ -0.63
TRAF4-210ENST00000475329 TEX261Q6UWH6 196 aa11.11□□□□□ -0.63
TRAF4-210ENST00000475329 MOB3BQ86TA1 216 aa11.11□□□□□ -0.63
TRAF4-210ENST00000475329 OR8H3Q8N146 312 aa11.11□□□□□ -0.63
TRAF4-210ENST00000475329 MBD6Q96DN6 1003 aa11.11□□□□□ -0.63
TRAF4-210ENST00000475329 TBX15Q96SF7 602 aa11.11□□□□□ -0.63
TRAF4-210ENST00000475329 ZNF471Q9BX82 626 aaPredicted RBP11.11□□□□□ -0.63
TRAF4-210ENST00000475329 QTRT1Q9BXR0 403 aaKnown RBP11.11□□□□□ -0.63
TRAF4-210ENST00000475329 MS4A7Q9GZW8 240 aaPredicted RBP11.11□□□□□ -0.63
TRAF4-210ENST00000475329 RBKSQ9H477 322 aa11.11□□□□□ -0.63
TRAF4-210ENST00000475329 WSB1Q9Y6I7 421 aa11.11□□□□□ -0.63
TRAF4-210ENST00000475329 U3KQ87 197 aa11.11□□□□□ -0.63
TRAF4-210ENST00000475329 A0A1W2PPI3 338 aa11.1□□□□□ -0.63
TRAF4-210ENST00000475329 IGSF23A1L1A6 192 aa11.1□□□□□ -0.63
TRAF4-210ENST00000475329 FAM24AA6NFZ4 105 aa11.1□□□□□ -0.63
TRAF4-210ENST00000475329 C15orf61A6NNL5 157 aa11.1□□□□□ -0.63
TRAF4-210ENST00000475329 TMEM50AO95807 157 aa11.1□□□□□ -0.63
TRAF4-210ENST00000475329 SAA1P0DJI8 122 aaPredicted RBP11.1□□□□□ -0.63
TRAF4-210ENST00000475329 PAX9P55771 341 aa11.1□□□□□ -0.63
TRAF4-210ENST00000475329 LGALS4P56470 323 aa11.1□□□□□ -0.63
TRAF4-210ENST00000475329 RPS16P62249 146 aaKnown RBP11.1□□□□□ -0.63
TRAF4-210ENST00000475329 EWSR1Q01844 656 aaKnown RBP eCLIP11.1□□□□□ -0.632e-6■■■■□ 23.3
TRAF4-210ENST00000475329 MINOS1Q5TGZ0 78 aa11.1□□□□□ -0.63
TRAF4-210ENST00000475329 OR52E5Q8NH55 327 aa11.1□□□□□ -0.63
TRAF4-210ENST00000475329 SMIM8Q96KF7 97 aa11.1□□□□□ -0.63
TRAF4-210ENST00000475329 CIB3Q96Q77 187 aaPredicted RBP11.1□□□□□ -0.63
TRAF4-210ENST00000475329 BET1LQ9NYM9 111 aa11.1□□□□□ -0.63
TRAF4-210ENST00000475329 FBXL17Q9UF56 701 aa11.1□□□□□ -0.63
TRAF4-210ENST00000475329 NUP50Q9UKX7 468 aa11.1□□□□□ -0.63
TRAF4-210ENST00000475329 PRNDQ9UKY0 176 aa11.1□□□□□ -0.63
TRAF4-210ENST00000475329 PAIP2BQ9ULR5 123 aaKnown RBP11.1□□□□□ -0.63
TRAF4-210ENST00000475329 FOXA2Q9Y261 457 aaPredicted RBP11.1□□□□□ -0.63
TRAF4-210ENST00000475329 TBL2Q9Y4P3 447 aaKnown RBP11.1□□□□□ -0.63
TRAF4-210ENST00000475329 MINOS1-NBL1R4GNA1 71 aa11.1□□□□□ -0.63
TRAF4-210ENST00000475329 HECTD1Q9ULT8 2610 aa11.1□□□□□ -0.63
TRAF4-210ENST00000475329 IGHV3-72A0A0B4J1Y9 119 aa11.09□□□□□ -0.63
TRAF4-210ENST00000475329 TRAV3A0A0B4J244 114 aa11.09□□□□□ -0.63
TRAF4-210ENST00000475329 A0A1W2PRD5 423 aa11.09□□□□□ -0.63
TRAF4-210ENST00000475329 A0A1W2PRF3 423 aa11.09□□□□□ -0.63
TRAF4-210ENST00000475329 A0A1W2PRM7 423 aa11.09□□□□□ -0.63
TRAF4-210ENST00000475329 CEBPZOSA8MTT3 80 aa11.09□□□□□ -0.63
TRAF4-210ENST00000475329 OOSP1A8MZH6 123 aa11.09□□□□□ -0.63
TRAF4-210ENST00000475329 UPK2O00526 184 aa11.09□□□□□ -0.63
TRAF4-210ENST00000475329 SPDEFO95238 335 aa11.09□□□□□ -0.63
TRAF4-210ENST00000475329 LY86O95711 162 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms