RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 CENPOQ9BU64 300 aa9.42□□□□□ -0.9
SKA3-206ENST00000475251 TRAV25A0A0B4J276 109 aa9.41□□□□□ -0.9
SKA3-206ENST00000475251 ZNF320A2RRD8 509 aa9.41□□□□□ -0.9
SKA3-206ENST00000475251 DPPA5A6NC42 116 aa9.41□□□□□ -0.9
SKA3-206ENST00000475251 A8MWP6 167 aa9.41□□□□□ -0.9
SKA3-206ENST00000475251 BET1O15155 118 aa9.41□□□□□ -0.9
SKA3-206ENST00000475251 FABP7O15540 132 aa9.41□□□□□ -0.9
SKA3-206ENST00000475251 OR2C1O95371 312 aa9.41□□□□□ -0.9
SKA3-206ENST00000475251 CRYZL1O95825 349 aa9.41□□□□□ -0.9
SKA3-206ENST00000475251 DHFRP00374 187 aa9.41□□□□□ -0.9
SKA3-206ENST00000475251 GSTT2P0CG29 244 aa9.41□□□□□ -0.9
SKA3-206ENST00000475251 GSTT2BP0CG30 244 aa9.41□□□□□ -0.9
SKA3-206ENST00000475251 ARL3P36405 182 aa9.41□□□□□ -0.9
SKA3-206ENST00000475251 CDK10Q15131 360 aa9.41□□□□□ -0.9
SKA3-206ENST00000475251 MRGPRG-AS1Q2M3A8 158 aa9.41□□□□□ -0.9
SKA3-206ENST00000475251 HSD17B12Q53GQ0 312 aa9.41□□□□□ -0.9
SKA3-206ENST00000475251 IDO2Q6ZQW0 420 aa9.41□□□□□ -0.9
SKA3-206ENST00000475251 RBPMS2Q6ZRY4 209 aaKnown RBP9.41□□□□□ -0.9
SKA3-206ENST00000475251 SLC38A6Q8IZM9 456 aa9.41□□□□□ -0.9
SKA3-206ENST00000475251 OR56B1Q8NGI3 324 aa9.41□□□□□ -0.9
SKA3-206ENST00000475251 OR1L6Q8NGR2 347 aa9.41□□□□□ -0.9
SKA3-206ENST00000475251 MARC2Q969Z3 335 aa9.41□□□□□ -0.9
SKA3-206ENST00000475251 KCNK15Q9H427 330 aa9.41□□□□□ -0.9
SKA3-206ENST00000475251 TMEM213A2RRL7 107 aa9.4□□□□□ -0.9
SKA3-206ENST00000475251 SCAF4O95104 1147 aaKnown RBP9.4□□□□□ -0.9
SKA3-206ENST00000475251 HLA-AP01891 365 aaKnown RBP9.4□□□□□ -0.9
SKA3-206ENST00000475251 EDN2P20800 178 aa9.4□□□□□ -0.9
SKA3-206ENST00000475251 TM4SF20Q53R12 229 aa9.4□□□□□ -0.9
SKA3-206ENST00000475251 PQLC1Q8N2U9 271 aa9.4□□□□□ -0.9
SKA3-206ENST00000475251 UXS1Q8NBZ7 420 aa9.4□□□□□ -0.9
SKA3-206ENST00000475251 VSTM2AQ8TAG5 236 aa9.4□□□□□ -0.9
SKA3-206ENST00000475251 CACNG8Q8WXS5 425 aa9.4□□□□□ -0.9
SKA3-206ENST00000475251 EEF1AKMT3Q96AZ1 226 aa9.4□□□□□ -0.9
SKA3-206ENST00000475251 ARHGAP5-AS1Q96IT6 56 aa9.4□□□□□ -0.9
SKA3-206ENST00000475251 CABLES2Q9BTV7 478 aa9.4□□□□□ -0.9
SKA3-206ENST00000475251 PECRQ9BY49 303 aa9.4□□□□□ -0.9
SKA3-206ENST00000475251 ZNF430Q9H8G1 570 aaPredicted RBP9.4□□□□□ -0.9
SKA3-206ENST00000475251 PLGRKTQ9HBL7 147 aa9.4□□□□□ -0.9
SKA3-206ENST00000475251 MLXQ9UH92 298 aa9.4□□□□□ -0.9
SKA3-206ENST00000475251 FBXL7Q9UJT9 491 aa9.4□□□□□ -0.9
SKA3-206ENST00000475251 DMRT1Q9Y5R6 373 aa9.4□□□□□ -0.9
SKA3-206ENST00000475251 TRBV6-7A0A0A0MS04 114 aa9.39□□□□□ -0.91
SKA3-206ENST00000475251 KIR2DL5BA0A0G2JN68 375 aa9.39□□□□□ -0.91
SKA3-206ENST00000475251 KIR2DL5BA0A0G2JPC4 375 aa9.39□□□□□ -0.91
SKA3-206ENST00000475251 NPIPB5A8MRT5 1133 aa9.39□□□□□ -0.91
SKA3-206ENST00000475251 FOXI3A8MTJ6 420 aaPredicted RBP9.39□□□□□ -0.91
SKA3-206ENST00000475251 CDK1P06493 297 aa9.39□□□□□ -0.91
SKA3-206ENST00000475251 CD3GP09693 182 aa9.39□□□□□ -0.91
SKA3-206ENST00000475251 SAA1P0DJI8 122 aaPredicted RBP9.39□□□□□ -0.91
SKA3-206ENST00000475251 CD37P11049 281 aa9.39□□□□□ -0.91
SKA3-206ENST00000475251 DUTP33316 252 aaKnown RBP9.39□□□□□ -0.91
SKA3-206ENST00000475251 SSX1Q16384 188 aa9.39□□□□□ -0.91
SKA3-206ENST00000475251 DEFB135Q30KP9 77 aa9.39□□□□□ -0.91
SKA3-206ENST00000475251 CEACAM19Q7Z692 300 aa9.39□□□□□ -0.91
SKA3-206ENST00000475251 KIR2DL5AQ8N109 375 aa9.39□□□□□ -0.91
SKA3-206ENST00000475251 OR2C3Q8N628 320 aa9.39□□□□□ -0.91
SKA3-206ENST00000475251 NANOGP1Q8N7R0 232 aa9.39□□□□□ -0.91
SKA3-206ENST00000475251 STPG3Q8N7X2 389 aa9.39□□□□□ -0.91
SKA3-206ENST00000475251 KIR2DL5BQ8NHK3 375 aa9.39□□□□□ -0.91
SKA3-206ENST00000475251 GATAD1Q8WUU5 269 aa9.39□□□□□ -0.91
SKA3-206ENST00000475251 CYGBQ8WWM9 190 aa9.39□□□□□ -0.91
SKA3-206ENST00000475251 GINS4Q9BRT9 223 aa9.39□□□□□ -0.91
SKA3-206ENST00000475251 DCUN1D5Q9BTE7 237 aa9.39□□□□□ -0.91
SKA3-206ENST00000475251 MRPS7Q9Y2R9 242 aaKnown RBP9.39□□□□□ -0.91
SKA3-206ENST00000475251 SLC17A2O00624 439 aa9.38□□□□□ -0.91
SKA3-206ENST00000475251 DEDDO75618 318 aa9.38□□□□□ -0.91
SKA3-206ENST00000475251 HIST1H1BP16401 226 aaKnown RBP9.38□□□□□ -0.91
SKA3-206ENST00000475251 TMEM50BP56557 158 aa9.38□□□□□ -0.91
SKA3-206ENST00000475251 EWSR1Q01844 656 aaKnown RBP eCLIP9.38□□□□□ -0.91
SKA3-206ENST00000475251 INSL4Q14641 139 aa9.38□□□□□ -0.91
SKA3-206ENST00000475251 P2RY14Q15391 338 aa9.38□□□□□ -0.91
SKA3-206ENST00000475251 MED22Q15528 200 aa9.38□□□□□ -0.91
SKA3-206ENST00000475251 IGSF11Q5DX21 431 aa9.38□□□□□ -0.91
SKA3-206ENST00000475251 BTNL8Q6UX41 500 aa9.38□□□□□ -0.91
SKA3-206ENST00000475251 CLEC19AQ6UXS0 136 aa9.38□□□□□ -0.91
SKA3-206ENST00000475251 AHSA2Q719I0 299 aa9.38□□□□□ -0.91
SKA3-206ENST00000475251 PHLDA1Q8WV24 401 aaPredicted RBP9.38□□□□□ -0.91
SKA3-206ENST00000475251 CCDC140Q96MF4 163 aa9.38□□□□□ -0.91
SKA3-206ENST00000475251 SPAG8Q99932 426 aaPredicted RBP9.38□□□□□ -0.91
SKA3-206ENST00000475251 S100A14Q9HCY8 104 aa9.38□□□□□ -0.91
SKA3-206ENST00000475251 MRPL27Q9P0M9 148 aaKnown RBP9.38□□□□□ -0.91
SKA3-206ENST00000475251 PRELID3BQ9Y3B1 194 aa9.38□□□□□ -0.91
SKA3-206ENST00000475251 KMT2AQ03164 3969 aa9.38□□□□□ -0.91
SKA3-206ENST00000475251 TRBV7-1A0A0A6YYK4 115 aa9.37□□□□□ -0.91
SKA3-206ENST00000475251 FCGR3AP08637 254 aa9.37□□□□□ -0.91
SKA3-206ENST00000475251 UCHL1P09936 223 aa9.37□□□□□ -0.91
SKA3-206ENST00000475251 MYOD1P15172 320 aa9.37□□□□□ -0.91
SKA3-206ENST00000475251 GALP22466 123 aa9.37□□□□□ -0.91
SKA3-206ENST00000475251 MAS1LP35410 378 aa9.37□□□□□ -0.91
SKA3-206ENST00000475251 ELLP55199 621 aaPredicted RBP9.37□□□□□ -0.91
SKA3-206ENST00000475251 RAB11BQ15907 218 aa9.37□□□□□ -0.91
SKA3-206ENST00000475251 C10orf55Q5SWW7 151 aa9.37□□□□□ -0.91
SKA3-206ENST00000475251 RNF183Q96D59 192 aa9.37□□□□□ -0.91
SKA3-206ENST00000475251 C5orf30Q96GV9 206 aa9.37□□□□□ -0.91
SKA3-206ENST00000475251 CXorf58Q96LI9 332 aa9.37□□□□□ -0.91
SKA3-206ENST00000475251 FYTTD1Q96QD9 318 aaKnown RBP9.37□□□□□ -0.91
SKA3-206ENST00000475251 MND1Q9BWT6 205 aa9.37□□□□□ -0.91
SKA3-206ENST00000475251 MFFQ9GZY8 342 aa9.37□□□□□ -0.91
SKA3-206ENST00000475251 OR51E2Q9H255 320 aa9.37□□□□□ -0.91
SKA3-206ENST00000475251 C8orf4Q9NR00 106 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms