RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 ELK1P19419 428 aa18.66■□□□□ 0.58
CPNE1-223ENST00000475146 EIF4EBP1Q13541 118 aaPredicted RBP18.66■□□□□ 0.58
CPNE1-223ENST00000475146 FHL3Q13643 280 aa18.66■□□□□ 0.58
CPNE1-223ENST00000475146 TNXAQ16473 311 aa18.66■□□□□ 0.58
CPNE1-223ENST00000475146 PRSS8Q16651 343 aa18.66■□□□□ 0.58
CPNE1-223ENST00000475146 TMEM17Q86X19 198 aa18.66■□□□□ 0.58
CPNE1-223ENST00000475146 SNX29P2Q8IUI4 249 aa18.66■□□□□ 0.58
CPNE1-223ENST00000475146 OR1N2Q8NGR9 330 aa18.66■□□□□ 0.58
CPNE1-223ENST00000475146 OR5H2Q8NGV7 314 aa18.66■□□□□ 0.58
CPNE1-223ENST00000475146 GIMAP1Q8WWP7 306 aa18.66■□□□□ 0.58
CPNE1-223ENST00000475146 PHB2Q99623 299 aa18.66■□□□□ 0.58
CPNE1-223ENST00000475146 I3L521 148 aa18.65■□□□□ 0.58
CPNE1-223ENST00000475146 CREBL2O60519 120 aaPredicted RBP18.65■□□□□ 0.58
CPNE1-223ENST00000475146 PMP2P02689 132 aa18.65■□□□□ 0.58
CPNE1-223ENST00000475146 TAS2R46P59540 309 aa18.65■□□□□ 0.58
CPNE1-223ENST00000475146 RUNX1Q01196 453 aa18.65■□□□□ 0.58
CPNE1-223ENST00000475146 ZNF616Q08AN1 781 aa18.65■□□□□ 0.58
CPNE1-223ENST00000475146 MSMO1Q15800 293 aa18.65■□□□□ 0.58
CPNE1-223ENST00000475146 ZBTB34Q8NCN2 500 aa18.65■□□□□ 0.58
CPNE1-223ENST00000475146 OR5T1Q8NG75 326 aa18.65■□□□□ 0.58
CPNE1-223ENST00000475146 MRAPQ8TCY5 172 aa18.65■□□□□ 0.58
CPNE1-223ENST00000475146 ALX4Q9H161 411 aaPredicted RBP18.65■□□□□ 0.58
CPNE1-223ENST00000475146 TRGV3P03979 118 aa18.64■□□□□ 0.57
CPNE1-223ENST00000475146 ZNF182P17025 639 aaPredicted RBP18.64■□□□□ 0.57
CPNE1-223ENST00000475146 RFX2P48378 723 aa18.64■□□□□ 0.57
CPNE1-223ENST00000475146 MRGPRG-AS1Q2M3A8 158 aa18.64■□□□□ 0.57
CPNE1-223ENST00000475146 POC5Q8NA72 575 aa18.64■□□□□ 0.57
CPNE1-223ENST00000475146 SLA2Q9H6Q3 261 aa18.64■□□□□ 0.57
CPNE1-223ENST00000475146 ACTL6BO94805 426 aa18.63■□□□□ 0.57
CPNE1-223ENST00000475146 IGHV3-11P01762 117 aa18.63■□□□□ 0.57
CPNE1-223ENST00000475146 OR8U8P0C7N1 319 aa18.63■□□□□ 0.57
CPNE1-223ENST00000475146 APELAP0DMC3 54 aa18.63■□□□□ 0.57
CPNE1-223ENST00000475146 NAT1P18440 290 aa18.63■□□□□ 0.57
CPNE1-223ENST00000475146 KIR2DS2P43631 304 aa18.63■□□□□ 0.57
CPNE1-223ENST00000475146 DYRK1AQ13627 763 aa18.63■□□□□ 0.57
CPNE1-223ENST00000475146 VKORC1L1Q8N0U8 176 aa18.63■□□□□ 0.57
CPNE1-223ENST00000475146 GPX8Q8TED1 209 aa18.63■□□□□ 0.57
CPNE1-223ENST00000475146 TMEM68Q96MH6 324 aa18.63■□□□□ 0.57
CPNE1-223ENST00000475146 ZNF2Q9BSG1 426 aaPredicted RBP18.63■□□□□ 0.57
CPNE1-223ENST00000475146 ZNF430Q9H8G1 570 aaPredicted RBP18.63■□□□□ 0.57
CPNE1-223ENST00000475146 MPPED1O15442 326 aa18.62■□□□□ 0.57
CPNE1-223ENST00000475146 LGALS1P09382 135 aaKnown RBP18.62■□□□□ 0.57
CPNE1-223ENST00000475146 HLA-DMAP28067 261 aa18.62■□□□□ 0.57
CPNE1-223ENST00000475146 CATR1Q13166 79 aa18.62■□□□□ 0.57
CPNE1-223ENST00000475146 ASPHD1Q5U4P2 390 aa18.62■□□□□ 0.57
CPNE1-223ENST00000475146 CLVS1Q8IUQ0 354 aaPredicted RBP18.62■□□□□ 0.57
CPNE1-223ENST00000475146 MMD2Q8IY49 270 aa18.62■□□□□ 0.57
CPNE1-223ENST00000475146 SRSF12Q8WXF0 261 aaKnown RBP18.62■□□□□ 0.57
CPNE1-223ENST00000475146 SCPEP1Q9HB40 452 aa18.62■□□□□ 0.57
CPNE1-223ENST00000475146 MSGN1A6NI15 193 aa18.61■□□□□ 0.57
CPNE1-223ENST00000475146 H3BUA1 57 aa18.61■□□□□ 0.57
CPNE1-223ENST00000475146 SULT1C2O00338 296 aa18.61■□□□□ 0.57
CPNE1-223ENST00000475146 HRH1P35367 487 aa18.61■□□□□ 0.57
CPNE1-223ENST00000475146 KRTAP10-11P60412 298 aa18.61■□□□□ 0.57
CPNE1-223ENST00000475146 EGFEM1PQ0D2K5 195 aa18.61■□□□□ 0.57
CPNE1-223ENST00000475146 ZNF818PQ6ZRF7 136 aa18.61■□□□□ 0.57
CPNE1-223ENST00000475146 VSTM2AQ8TAG5 236 aa18.61■□□□□ 0.57
CPNE1-223ENST00000475146 COA4Q9NYJ1 87 aa18.61■□□□□ 0.57
CPNE1-223ENST00000475146 SEC14L6B5MCN3 397 aa18.6■□□□□ 0.57
CPNE1-223ENST00000475146 RCVRNP35243 200 aa18.6■□□□□ 0.57
CPNE1-223ENST00000475146 BRWD1-AS2P59051 145 aa18.6■□□□□ 0.57
CPNE1-223ENST00000475146 RNASE12Q5GAN4 147 aaKnown RBP18.6■□□□□ 0.57
CPNE1-223ENST00000475146 C9orf66Q5T8R8 295 aa18.6■□□□□ 0.57
CPNE1-223ENST00000475146 AADACL3Q5VUY0 350 aa18.6■□□□□ 0.57
CPNE1-223ENST00000475146 DHRS11Q6UWP2 260 aa18.6■□□□□ 0.57
CPNE1-223ENST00000475146 SPAG16Q8N0X2 631 aa18.6■□□□□ 0.57
CPNE1-223ENST00000475146 OR51H1Q8NH63 302 aa18.6■□□□□ 0.57
CPNE1-223ENST00000475146 BORCS5Q969J3 196 aa18.6■□□□□ 0.57
CPNE1-223ENST00000475146 MOB3AQ96BX8 217 aa18.6■□□□□ 0.57
CPNE1-223ENST00000475146 EXTL2Q9UBQ6 330 aa18.6■□□□□ 0.57
CPNE1-223ENST00000475146 LINC01619G3V211 115 aa18.59■□□□□ 0.57
CPNE1-223ENST00000475146 RAMP3O60896 148 aa18.59■□□□□ 0.57
CPNE1-223ENST00000475146 KBTBD11O94819 623 aa18.59■□□□□ 0.57
CPNE1-223ENST00000475146 OR2A4O95047 310 aa18.59■□□□□ 0.57
CPNE1-223ENST00000475146 HRASP01112 189 aa18.59■□□□□ 0.57
CPNE1-223ENST00000475146 SPCS2Q15005 226 aa18.59■□□□□ 0.57
CPNE1-223ENST00000475146 C10orf55Q5SWW7 151 aa18.59■□□□□ 0.57
CPNE1-223ENST00000475146 SSX9Q7RTT3 188 aa18.59■□□□□ 0.57
CPNE1-223ENST00000475146 LYSMD2Q8IV50 215 aa18.59■□□□□ 0.57
CPNE1-223ENST00000475146 OR6F1Q8NGZ6 308 aa18.59■□□□□ 0.57
CPNE1-223ENST00000475146 RHOVQ96L33 236 aa18.59■□□□□ 0.57
CPNE1-223ENST00000475146 OR2A7Q96R45 310 aa18.59■□□□□ 0.57
CPNE1-223ENST00000475146 ADAM30Q9UKF2 790 aa18.59■□□□□ 0.57
CPNE1-223ENST00000475146 IGHV4OR15-8A0A075B7B6 117 aa18.58■□□□□ 0.56
CPNE1-223ENST00000475146 A0A087WW49 117 aa18.58■□□□□ 0.56
CPNE1-223ENST00000475146 C13orf42A0A1B0GVH6 325 aa18.58■□□□□ 0.56
CPNE1-223ENST00000475146 GNRHRP30968 328 aa18.58■□□□□ 0.56
CPNE1-223ENST00000475146 SLURP1P55000 103 aa18.58■□□□□ 0.56
CPNE1-223ENST00000475146 RAB2BQ8WUD1 216 aa18.58■□□□□ 0.56
CPNE1-223ENST00000475146 SPIN2AQ99865 258 aa18.58■□□□□ 0.56
CPNE1-223ENST00000475146 SPIN2BQ9BPZ2 258 aa18.58■□□□□ 0.56
CPNE1-223ENST00000475146 TNCP24821 2201 aa18.57■□□□□ 0.56
CPNE1-223ENST00000475146 TSPAN5P62079 268 aa18.57■□□□□ 0.56
CPNE1-223ENST00000475146 PUSL1Q8N0Z8 303 aaKnown RBP18.57■□□□□ 0.56
CPNE1-223ENST00000475146 TMEM167AQ8TBQ9 72 aa18.57■□□□□ 0.56
CPNE1-223ENST00000475146 DCUN1D4Q92564 292 aa18.57■□□□□ 0.56
CPNE1-223ENST00000475146 TINAGL1Q9GZM7 467 aaPredicted RBP18.57■□□□□ 0.56
CPNE1-223ENST00000475146 FXYD6Q9H0Q3 95 aa18.57■□□□□ 0.56
CPNE1-223ENST00000475146 A0A0G2JLM5 398 aa18.56■□□□□ 0.56
CPNE1-223ENST00000475146 RGS5O15539 181 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms