RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 J3QR06 171 aa5.07□□□□□ -1.6
CLK1-210ENST00000473565 ITGB1BP1O14713 200 aa5.07□□□□□ -1.6
CLK1-210ENST00000473565 NDUFA2O43678 99 aa5.07□□□□□ -1.6
CLK1-210ENST00000473565 PPIAL4GP0DN37 164 aa5.07□□□□□ -1.6
CLK1-210ENST00000473565 NQO2P16083 231 aa5.07□□□□□ -1.6
CLK1-210ENST00000473565 IGFBP2P18065 325 aa5.07□□□□□ -1.6
CLK1-210ENST00000473565 AGAP20933 346 aa5.07□□□□□ -1.6
CLK1-210ENST00000473565 THBS3P49746 956 aa5.07□□□□□ -1.6
CLK1-210ENST00000473565 SULT1A1P50225 295 aa5.07□□□□□ -1.6
CLK1-210ENST00000473565 OR4A47Q6IF82 309 aa5.07□□□□□ -1.6
CLK1-210ENST00000473565 Q6ZRG5 221 aa5.07□□□□□ -1.6
CLK1-210ENST00000473565 ABHD12Q8N2K0 398 aa5.07□□□□□ -1.6
CLK1-210ENST00000473565 OR4A16Q8NH70 328 aa5.07□□□□□ -1.6
CLK1-210ENST00000473565 OR4S2Q8NH73 311 aa5.07□□□□□ -1.6
CLK1-210ENST00000473565 CD300LFQ8TDQ1 290 aa5.07□□□□□ -1.6
CLK1-210ENST00000473565 DTD1Q8TEA8 209 aa5.07□□□□□ -1.6
CLK1-210ENST00000473565 GINS3Q9BRX5 216 aa5.07□□□□□ -1.6
CLK1-210ENST00000473565 ARV1Q9H2C2 271 aa5.07□□□□□ -1.6
CLK1-210ENST00000473565 SIRT7Q9NRC8 400 aa5.07□□□□□ -1.6
CLK1-210ENST00000473565 ABCA2Q9BZC7 2435 aa5.07□□□□□ -1.6
CLK1-210ENST00000473565 ANKRD17O75179 2603 aaKnown RBP5.07□□□□□ -1.6
CLK1-210ENST00000473565 ABCA1O95477 2261 aa5.07□□□□□ -1.6
CLK1-210ENST00000473565 NBPF19A0A087WUL8 3843 aa5.07□□□□□ -1.6
CLK1-210ENST00000473565 ERVK-16P61578 105 aa5.07□□□□□ -1.6
CLK1-210ENST00000473565 ARF6P62330 175 aa5.07□□□□□ -1.6
CLK1-210ENST00000473565 RELBQ01201 579 aa5.07□□□□□ -1.6
CLK1-210ENST00000473565 ZNF525Q8N782 197 aa5.07□□□□□ -1.6
CLK1-210ENST00000473565 TCTEX1D1Q8N7M0 179 aa5.07□□□□□ -1.6
CLK1-210ENST00000473565 OR8B3Q8NGG8 313 aa5.07□□□□□ -1.6
CLK1-210ENST00000473565 OR13D1Q8NGV5 346 aa5.07□□□□□ -1.6
CLK1-210ENST00000473565 RITA1Q96K30 269 aa5.07□□□□□ -1.6
CLK1-210ENST00000473565 SMIM8Q96KF7 97 aa5.07□□□□□ -1.6
CLK1-210ENST00000473565 OR8B2Q96RD0 313 aa5.07□□□□□ -1.6
CLK1-210ENST00000473565 RSG1Q9BU20 258 aa5.07□□□□□ -1.6
CLK1-210ENST00000473565 COA4Q9NYJ1 87 aa5.07□□□□□ -1.6
CLK1-210ENST00000473565 FAM96BQ9Y3D0 163 aa5.07□□□□□ -1.6
CLK1-210ENST00000473565 UBE2L5PA0A1B0GUS4 154 aa5.06□□□□□ -1.6
CLK1-210ENST00000473565 PRH1P02810 166 aa5.06□□□□□ -1.6
CLK1-210ENST00000473565 SPP1P10451 314 aa5.06□□□□□ -1.6
CLK1-210ENST00000473565 MMP9P14780 707 aa5.06□□□□□ -1.6
CLK1-210ENST00000473565 SULT1A2P50226 295 aa5.06□□□□□ -1.6
CLK1-210ENST00000473565 GNB2P62879 340 aa5.06□□□□□ -1.6
CLK1-210ENST00000473565 EIF5AP63241 154 aaKnown RBP5.06□□□□□ -1.6
CLK1-210ENST00000473565 ZNF616Q08AN1 781 aa5.06□□□□□ -1.6
CLK1-210ENST00000473565 KLRD1Q13241 179 aa5.06□□□□□ -1.6
CLK1-210ENST00000473565 SLC25A24Q6NUK1 477 aa5.06□□□□□ -1.6
CLK1-210ENST00000473565 ZNF833PQ6ZTB9 187 aa5.06□□□□□ -1.6
CLK1-210ENST00000473565 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.06□□□□□ -1.6
CLK1-210ENST00000473565 OR2G3Q8NGZ4 309 aa5.06□□□□□ -1.6
CLK1-210ENST00000473565 NRGNQ92686 78 aa5.06□□□□□ -1.6
CLK1-210ENST00000473565 RAB1CQ92928 201 aa5.06□□□□□ -1.6
CLK1-210ENST00000473565 NEIL1Q96FI4 390 aaPredicted RBP5.06□□□□□ -1.6
CLK1-210ENST00000473565 TIMD4Q96H15 378 aa5.06□□□□□ -1.6
CLK1-210ENST00000473565 NARS2Q96I59 477 aaKnown RBP5.06□□□□□ -1.6
CLK1-210ENST00000473565 ATP5SQ99766 215 aa5.06□□□□□ -1.6
CLK1-210ENST00000473565 MS4A7Q9GZW8 240 aaPredicted RBP5.06□□□□□ -1.6
CLK1-210ENST00000473565 TMEM133Q9H2Q1 129 aa5.06□□□□□ -1.6
CLK1-210ENST00000473565 NUP50Q9UKX7 468 aa5.06□□□□□ -1.6
CLK1-210ENST00000473565 FBXO7Q9Y3I1 522 aa5.06□□□□□ -1.6
CLK1-210ENST00000473565 IGHV2-26A0A0B4J1V2 119 aa5.06□□□□□ -1.6
CLK1-210ENST00000473565 A1L4Q6 167 aa5.06□□□□□ -1.6
CLK1-210ENST00000473565 RBFOX2O43251 390 aaKnown RBP eCLIP5.06□□□□□ -1.6
CLK1-210ENST00000473565 ATG12O94817 140 aa5.06□□□□□ -1.6
CLK1-210ENST00000473565 FGF2P09038 288 aa5.06□□□□□ -1.6
CLK1-210ENST00000473565 THNSL2Q86YJ6 484 aa5.06□□□□□ -1.6
CLK1-210ENST00000473565 LILRB2Q8N423 598 aa5.06□□□□□ -1.6
CLK1-210ENST00000473565 ZNF843Q8N446 348 aa5.06□□□□□ -1.6
CLK1-210ENST00000473565 PNKDQ8N490 385 aa5.06□□□□□ -1.6
CLK1-210ENST00000473565 OR9G1Q8NH87 305 aa5.06□□□□□ -1.6
CLK1-210ENST00000473565 FAM213BQ8TBF2 198 aa5.06□□□□□ -1.6
CLK1-210ENST00000473565 NEU4Q8WWR8 484 aaPredicted RBP5.06□□□□□ -1.6
CLK1-210ENST00000473565 CHODLQ9H9P2 273 aa5.06□□□□□ -1.6
CLK1-210ENST00000473565 GAB2Q9UQC2 676 aa5.06□□□□□ -1.6
CLK1-210ENST00000473565 TRBV23-1A0A0A0MS06 115 aa5.06□□□□□ -1.6
CLK1-210ENST00000473565 PIGBOS1A0A0B4J2F0 54 aa5.06□□□□□ -1.6
CLK1-210ENST00000473565 FAM90A26D6RGX4 464 aa5.06□□□□□ -1.6
CLK1-210ENST00000473565 H0YJW9 148 aa5.06□□□□□ -1.6
CLK1-210ENST00000473565 SHOXO15266 292 aa5.06□□□□□ -1.6
CLK1-210ENST00000473565 GPR6P46095 362 aaPredicted RBP5.06□□□□□ -1.6
CLK1-210ENST00000473565 BAXQ07812 192 aa5.06□□□□□ -1.6
CLK1-210ENST00000473565 SLC38A11Q08AI6 406 aa5.06□□□□□ -1.6
CLK1-210ENST00000473565 ZNF266Q14584 549 aa5.06□□□□□ -1.6
CLK1-210ENST00000473565 LDLRAD2Q5SZI1 272 aa5.06□□□□□ -1.6
CLK1-210ENST00000473565 EIF5AL1Q6IS14 154 aaKnown RBP5.06□□□□□ -1.6
CLK1-210ENST00000473565 TMEM14EPQ6UXP3 125 aa5.06□□□□□ -1.6
CLK1-210ENST00000473565 BPIFCQ8NFQ6 507 aa5.06□□□□□ -1.6
CLK1-210ENST00000473565 NABP2Q9BQ15 211 aa5.06□□□□□ -1.6
CLK1-210ENST00000473565 HEYLQ9NQ87 328 aaPredicted RBP5.06□□□□□ -1.6
CLK1-210ENST00000473565 FAM212BQ9NTI7 297 aaPredicted RBP5.06□□□□□ -1.6
CLK1-210ENST00000473565 MIOXQ9UGB7 285 aa5.06□□□□□ -1.6
CLK1-210ENST00000473565 SESN1Q9Y6P5 492 aa5.06□□□□□ -1.6
CLK1-210ENST00000473565 A8MXK9 166 aa5.05□□□□□ -1.6
CLK1-210ENST00000473565 RRHO14718 337 aa5.05□□□□□ -1.6
CLK1-210ENST00000473565 ENSAO43768 121 aaKnown RBP5.05□□□□□ -1.6
CLK1-210ENST00000473565 SAA1P0DJI8 122 aaPredicted RBP5.05□□□□□ -1.6
CLK1-210ENST00000473565 ZFP36P26651 326 aaKnown RBP5.05□□□□□ -1.6
CLK1-210ENST00000473565 CAMLGP49069 296 aa5.05□□□□□ -1.6
CLK1-210ENST00000473565 TUSC1Q2TAM9 212 aa5.05□□□□□ -1.6
CLK1-210ENST00000473565 Q8N7P7 452 aa5.05□□□□□ -1.6
CLK1-210ENST00000473565 OR10A7Q8NGE5 316 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms