RNA–Protein interactions for RNA: ENST00000471697.1

SCN3A-207, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 4

Gene SCN3A, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-207ENST00000471697 FAAP20Q6NZ36 180 aa2.55□□□□□ -2
SCN3A-207ENST00000471697 MRPL54Q6P161 138 aaKnown RBP2.55□□□□□ -2
SCN3A-207ENST00000471697 Q6Q795 121 aa2.55□□□□□ -2
SCN3A-207ENST00000471697 TEX43Q6ZNM6 134 aa2.55□□□□□ -2
SCN3A-207ENST00000471697 GDPGP1Q6ZNW5 385 aa2.55□□□□□ -2
SCN3A-207ENST00000471697 FOXI2Q6ZQN5 318 aa2.55□□□□□ -2
SCN3A-207ENST00000471697 TRPT1Q86TN4 253 aaKnown RBP2.55□□□□□ -2
SCN3A-207ENST00000471697 NFE4Q86UQ8 179 aa2.55□□□□□ -2
SCN3A-207ENST00000471697 RAB42Q8N4Z0 105 aa2.55□□□□□ -2
SCN3A-207ENST00000471697 ZNF615Q8N8J6 731 aa2.55□□□□□ -2
SCN3A-207ENST00000471697 TMEM229BQ8NBD8 167 aa2.55□□□□□ -2
SCN3A-207ENST00000471697 TMEM178AQ8NBL3 297 aa2.55□□□□□ -2
SCN3A-207ENST00000471697 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.55□□□□□ -2
SCN3A-207ENST00000471697 OR1S1Q8NH92 325 aa2.55□□□□□ -2
SCN3A-207ENST00000471697 SLAMF6Q96DU3 332 aa2.55□□□□□ -2
SCN3A-207ENST00000471697 TMEM101Q96IK0 257 aa2.55□□□□□ -2
SCN3A-207ENST00000471697 TEX37Q96LM6 180 aa2.55□□□□□ -2
SCN3A-207ENST00000471697 LINC00477Q96M19 166 aa2.55□□□□□ -2
SCN3A-207ENST00000471697 CIB3Q96Q77 187 aaPredicted RBP2.55□□□□□ -2
SCN3A-207ENST00000471697 LYSMD1Q96S90 227 aa2.55□□□□□ -2
SCN3A-207ENST00000471697 IMMP2LQ96T52 175 aa2.55□□□□□ -2
SCN3A-207ENST00000471697 THTPAQ9BU02 230 aa2.55□□□□□ -2
SCN3A-207ENST00000471697 SMIM3Q9BZL3 60 aa2.55□□□□□ -2
SCN3A-207ENST00000471697 DPY30Q9C005 99 aa2.55□□□□□ -2
SCN3A-207ENST00000471697 PBOV1Q9GZY1 135 aa2.55□□□□□ -2
SCN3A-207ENST00000471697 KIF13AQ9H1H9 1805 aa2.55□□□□□ -2
SCN3A-207ENST00000471697 OR51I2Q9H344 312 aa2.55□□□□□ -2
SCN3A-207ENST00000471697 PRTFDC1Q9NRG1 225 aa2.55□□□□□ -2
SCN3A-207ENST00000471697 RPRMQ9NS64 109 aa2.55□□□□□ -2
SCN3A-207ENST00000471697 TMEM100Q9NV29 134 aa2.55□□□□□ -2
SCN3A-207ENST00000471697 MARCH5Q9NX47 278 aa2.55□□□□□ -2
SCN3A-207ENST00000471697 ZNF226Q9NYT6 803 aa2.55□□□□□ -2
SCN3A-207ENST00000471697 HECW2Q9P2P5 1572 aa2.55□□□□□ -2
SCN3A-207ENST00000471697 YTHDF2Q9Y5A9 579 aaKnown RBP2.55□□□□□ -2
SCN3A-207ENST00000471697 ORC6Q9Y5N6 252 aa2.55□□□□□ -2
SCN3A-207ENST00000471697 SOX21Q9Y651 276 aaPredicted RBP2.55□□□□□ -2
SCN3A-207ENST00000471697 DOCK6Q96HP0 2047 aa2.54□□□□□ -2
SCN3A-207ENST00000471697 MYH8P13535 1937 aa2.54□□□□□ -2
SCN3A-207ENST00000471697 UBR2Q8IWV8 1755 aa2.54□□□□□ -2
SCN3A-207ENST00000471697 BCORL1Q5H9F3 1711 aa2.54□□□□□ -2
SCN3A-207ENST00000471697 KNDC1Q76NI1 1749 aa2.54□□□□□ -2
SCN3A-207ENST00000471697 ANKRD26Q9UPS8 1709 aa2.54□□□□□ -2
SCN3A-207ENST00000471697 WDR62O43379 1518 aa2.54□□□□□ -2
SCN3A-207ENST00000471697 MAPKBP1O60336 1514 aa2.54□□□□□ -2
SCN3A-207ENST00000471697 ERVK-7P63135 1459 aa2.54□□□□□ -2
SCN3A-207ENST00000471697 GRIN2AQ12879 1464 aa2.54□□□□□ -2
SCN3A-207ENST00000471697 ARHGAP23Q9P227 1491 aa2.54□□□□□ -2
SCN3A-207ENST00000471697 RGS12O14924 1447 aa2.54□□□□□ -2
SCN3A-207ENST00000471697 ROBO3Q96MS0 1386 aa2.54□□□□□ -2
SCN3A-207ENST00000471697 IGHV1OR15-1A0A075B7D0 117 aa2.54□□□□□ -2
SCN3A-207ENST00000471697 TRAV9-2A0A087WT02 112 aa2.54□□□□□ -2
SCN3A-207ENST00000471697 TRAV8-2A0A0B4J237 113 aa2.54□□□□□ -2
SCN3A-207ENST00000471697 TRAV5A0A0B4J249 113 aa2.54□□□□□ -2
SCN3A-207ENST00000471697 TRAV8-6A0A0B4J262 113 aa2.54□□□□□ -2
SCN3A-207ENST00000471697 IGHV1-69-2A0A0G2JMI3 117 aa2.54□□□□□ -2
SCN3A-207ENST00000471697 A0A0J9YXV3 536 aa2.54□□□□□ -2
SCN3A-207ENST00000471697 C5orf49A4QMS7 147 aa2.54□□□□□ -2
SCN3A-207ENST00000471697 OR51F1A6NGY5 319 aa2.54□□□□□ -2
SCN3A-207ENST00000471697 OR4C45A6NMZ5 311 aa2.54□□□□□ -2
SCN3A-207ENST00000471697 EEF1E1-BLOC1S5C9J1V9 151 aa2.54□□□□□ -2
SCN3A-207ENST00000471697 C9JAW5 83 aa2.54□□□□□ -2
SCN3A-207ENST00000471697 XKRYO14609 159 aa2.54□□□□□ -2
SCN3A-207ENST00000471697 AGPAT2O15120 278 aa2.54□□□□□ -2
SCN3A-207ENST00000471697 EEF1E1O43324 174 aaKnown RBP2.54□□□□□ -2
SCN3A-207ENST00000471697 NDUFS5O43920 106 aa2.54□□□□□ -2
SCN3A-207ENST00000471697 EPPINO95925 133 aa2.54□□□□□ -2
SCN3A-207ENST00000471697 HLA-DQB1P01920 261 aa2.54□□□□□ -2
SCN3A-207ENST00000471697 ATP5G1P05496 136 aa2.54□□□□□ -2
SCN3A-207ENST00000471697 CD14P08571 375 aa2.54□□□□□ -2
SCN3A-207ENST00000471697 OR4A8P0C604 315 aa2.54□□□□□ -2
SCN3A-207ENST00000471697 PGAM2P15259 253 aa2.54□□□□□ -2
SCN3A-207ENST00000471697 CSRP1P21291 193 aaKnown RBP2.54□□□□□ -2
SCN3A-207ENST00000471697 VDAC1P21796 283 aa2.54□□□□□ -2
SCN3A-207ENST00000471697 NFYAP23511 347 aaPredicted RBP2.54□□□□□ -2
SCN3A-207ENST00000471697 PRTN3P24158 256 aa2.54□□□□□ -2
SCN3A-207ENST00000471697 BLVRBP30043 206 aaPredicted RBP2.54□□□□□ -2
SCN3A-207ENST00000471697 CXCL12P48061 93 aa2.54□□□□□ -2
SCN3A-207ENST00000471697 RPL34P49207 117 aaKnown RBP2.54□□□□□ -2
SCN3A-207ENST00000471697 POLR2HP52434 150 aaKnown RBP2.54□□□□□ -2
SCN3A-207ENST00000471697 NDUFA6P56556 154 aa2.54□□□□□ -2
SCN3A-207ENST00000471697 TPPP2P59282 170 aa2.54□□□□□ -2
SCN3A-207ENST00000471697 UBE2NP61088 152 aaKnown RBP2.54□□□□□ -2
SCN3A-207ENST00000471697 GNG5P63218 68 aa2.54□□□□□ -2
SCN3A-207ENST00000471697 CRADDP78560 199 aa2.54□□□□□ -2
SCN3A-207ENST00000471697 FABP5Q01469 135 aa2.54□□□□□ -2
SCN3A-207ENST00000471697 TMEM267Q0VDI3 215 aaPredicted RBP2.54□□□□□ -2
SCN3A-207ENST00000471697 DHRS2Q13268 280 aa2.54□□□□□ -2
SCN3A-207ENST00000471697 ZNF146Q15072 292 aa2.54□□□□□ -2
SCN3A-207ENST00000471697 PDGFRLQ15198 375 aa2.54□□□□□ -2
SCN3A-207ENST00000471697 TMEM183BQ1AE95 376 aa2.54□□□□□ -2
SCN3A-207ENST00000471697 TIMM50Q3ZCQ8 353 aa2.54□□□□□ -2
SCN3A-207ENST00000471697 CCSMST1Q4G0I0 132 aa2.54□□□□□ -2
SCN3A-207ENST00000471697 KHDC3LQ587J8 217 aa2.54□□□□□ -2
SCN3A-207ENST00000471697 C1orf100Q5SVJ3 147 aa2.54□□□□□ -2
SCN3A-207ENST00000471697 BCL2L15Q5TBC7 163 aa2.54□□□□□ -2
SCN3A-207ENST00000471697 SPATA31B1PQ5VZV4 182 aa2.54□□□□□ -2
SCN3A-207ENST00000471697 ZNF343Q6P1L6 599 aa2.54□□□□□ -2
SCN3A-207ENST00000471697 SCGB1D4Q6XE38 83 aa2.54□□□□□ -2
SCN3A-207ENST00000471697 DGAT2L6Q6ZPD8 337 aa2.54□□□□□ -2
SCN3A-207ENST00000471697 Q6ZRP5 223 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms