RNA–Protein interactions for RNA: ENST00000471635.5

RBM39-228, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-228ENST00000471635 IQCF5A8MTL0 148 aa0.47□□□□□ -2.33
RBM39-228ENST00000471635 FTCDNL1E5RQL4 147 aa0.47□□□□□ -2.33
RBM39-228ENST00000471635 F8VZ95 297 aa0.47□□□□□ -2.33
RBM39-228ENST00000471635 F8W036 122 aa0.47□□□□□ -2.33
RBM39-228ENST00000471635 CCRL2O00421 344 aa0.47□□□□□ -2.33
RBM39-228ENST00000471635 TOX3O15405 576 aaPredicted RBP0.47□□□□□ -2.33
RBM39-228ENST00000471635 SCN2BO60939 215 aa0.47□□□□□ -2.33
RBM39-228ENST00000471635 ORM1P02763 201 aa0.47□□□□□ -2.33
RBM39-228ENST00000471635 HLA-DQB2P05538 268 aa0.47□□□□□ -2.33
RBM39-228ENST00000471635 FXYD7P58549 80 aa0.47□□□□□ -2.33
RBM39-228ENST00000471635 TPI1P60174 286 aa0.47□□□□□ -2.33
RBM39-228ENST00000471635 RPS24P62847 133 aaKnown RBP0.47□□□□□ -2.33
RBM39-228ENST00000471635 FKBP1AP62942 108 aaKnown RBP0.47□□□□□ -2.33
RBM39-228ENST00000471635 CDK5R1Q15078 307 aa0.47□□□□□ -2.33
RBM39-228ENST00000471635 Q1T7F1 81 aa0.47□□□□□ -2.33
RBM39-228ENST00000471635 DNAL1Q4LDG9 190 aa0.47□□□□□ -2.33
RBM39-228ENST00000471635 ZNF705AQ6ZN79 300 aaPredicted RBP0.47□□□□□ -2.33
RBM39-228ENST00000471635 SLC36A1Q7Z2H8 476 aa0.47□□□□□ -2.33
RBM39-228ENST00000471635 SLC7A6Q92536 515 aa0.47□□□□□ -2.33
RBM39-228ENST00000471635 LRRC45Q96CN5 670 aa0.47□□□□□ -2.33
RBM39-228ENST00000471635 TMEM109Q9BVC6 243 aa0.47□□□□□ -2.33
RBM39-228ENST00000471635 CST9LQ9H4G1 147 aa0.47□□□□□ -2.33
RBM39-228ENST00000471635 HEATR5BQ9P2D3 2071 aa0.47□□□□□ -2.33
RBM39-228ENST00000471635 FLT4P35916 1363 aa0.46□□□□□ -2.34
RBM39-228ENST00000471635 TRAV7A0A075B6U4 112 aa0.46□□□□□ -2.34
RBM39-228ENST00000471635 A0A0J9YW62 118 aa0.46□□□□□ -2.34
RBM39-228ENST00000471635 H3BT86 120 aa0.46□□□□□ -2.34
RBM39-228ENST00000471635 H7C2G1 150 aa0.46□□□□□ -2.34
RBM39-228ENST00000471635 IL6P05231 212 aa0.46□□□□□ -2.34
RBM39-228ENST00000471635 CCL5P13501 91 aa0.46□□□□□ -2.34
RBM39-228ENST00000471635 PSMB8P28062 276 aa0.46□□□□□ -2.34
RBM39-228ENST00000471635 CD79BP40259 229 aa0.46□□□□□ -2.34
RBM39-228ENST00000471635 RPL28P46779 137 aaKnown RBP0.46□□□□□ -2.34
RBM39-228ENST00000471635 TAS2R20P59543 309 aa0.46□□□□□ -2.34
RBM39-228ENST00000471635 HLA-DRB3P79483 266 aa0.46□□□□□ -2.34
RBM39-228ENST00000471635 PLCXD2Q0VAA5 305 aa0.46□□□□□ -2.34
RBM39-228ENST00000471635 JOSD1Q15040 202 aaPredicted RBP0.46□□□□□ -2.34
RBM39-228ENST00000471635 ARHGAP11BQ3KRB8 267 aa0.46□□□□□ -2.34
RBM39-228ENST00000471635 FAM173BQ6P4H8 233 aa0.46□□□□□ -2.34
RBM39-228ENST00000471635 Q8N2B8 174 aa0.46□□□□□ -2.34
RBM39-228ENST00000471635 C9orf163Q8N9P6 203 aa0.46□□□□□ -2.34
RBM39-228ENST00000471635 RAB2BQ8WUD1 216 aa0.46□□□□□ -2.34
RBM39-228ENST00000471635 MBD3L1Q8WWY6 194 aa0.46□□□□□ -2.34
RBM39-228ENST00000471635 C12orf43Q96C57 262 aaKnown RBP0.46□□□□□ -2.34
RBM39-228ENST00000471635 ADAT1Q9BUB4 502 aaKnown RBP0.46□□□□□ -2.34
RBM39-228ENST00000471635 TIPINQ9BVW5 301 aa0.46□□□□□ -2.34
RBM39-228ENST00000471635 MS4A6AQ9H2W1 248 aa0.46□□□□□ -2.34
RBM39-228ENST00000471635 TIMM9Q9Y5J7 89 aa0.46□□□□□ -2.34
RBM39-228ENST00000471635 SCAF11Q99590 1463 aaKnown RBP0.46□□□□□ -2.34
RBM39-228ENST00000471635 PTPRSQ13332 1948 aa0.46□□□□□ -2.34
RBM39-228ENST00000471635 TRAV38-1A0A0B4J264 116 aa0.45□□□□□ -2.34
RBM39-228ENST00000471635 TEX50A0A1B0GTY4 177 aa0.45□□□□□ -2.34
RBM39-228ENST00000471635 TMEM213A2RRL7 107 aa0.45□□□□□ -2.34
RBM39-228ENST00000471635 TRAPPC13A5PLN9 417 aa0.45□□□□□ -2.34
RBM39-228ENST00000471635 RPSAP08865 295 aaKnown RBP0.45□□□□□ -2.34
RBM39-228ENST00000471635 TFPTP0C1Z6 253 aa0.45□□□□□ -2.34
RBM39-228ENST00000471635 ALDH3A1P30838 453 aa0.45□□□□□ -2.34
RBM39-228ENST00000471635 EMP1P54849 157 aa0.45□□□□□ -2.34
RBM39-228ENST00000471635 RAB14P61106 215 aa0.45□□□□□ -2.34
RBM39-228ENST00000471635 EMX1Q04741 257 aaPredicted RBP0.45□□□□□ -2.34
RBM39-228ENST00000471635 EBPQ15125 230 aaKnown RBP0.45□□□□□ -2.34
RBM39-228ENST00000471635 SURF2Q15527 256 aaPredicted RBP0.45□□□□□ -2.34
RBM39-228ENST00000471635 PLPPR5Q32ZL2 321 aa0.45□□□□□ -2.34
RBM39-228ENST00000471635 ACSM3Q53FZ2 586 aa0.45□□□□□ -2.34
RBM39-228ENST00000471635 RASSF6Q6ZTQ3 369 aa0.45□□□□□ -2.34
RBM39-228ENST00000471635 FAM19A5Q7Z5A7 132 aaPredicted RBP0.45□□□□□ -2.34
RBM39-228ENST00000471635 SPATA24Q86W54 205 aa0.45□□□□□ -2.34
RBM39-228ENST00000471635 ASB13Q8WXK3 278 aa0.45□□□□□ -2.34
RBM39-228ENST00000471635 TMA16Q96EY4 203 aaKnown RBP0.45□□□□□ -2.34
RBM39-228ENST00000471635 SLC22A4Q9H015 551 aa0.45□□□□□ -2.34
RBM39-228ENST00000471635 MED9Q9NWA0 146 aa0.45□□□□□ -2.34
RBM39-228ENST00000471635 ZNHIT6Q9NWK9 470 aaKnown RBP0.45□□□□□ -2.34
RBM39-228ENST00000471635 NUP160Q12769 1436 aa0.45□□□□□ -2.34
RBM39-228ENST00000471635 SMARCA4P51532 1647 aa0.45□□□□□ -2.34
RBM39-228ENST00000471635 TINCRA0A1B0GVN0 87 aa0.44□□□□□ -2.34
RBM39-228ENST00000471635 C5orf49A4QMS7 147 aa0.44□□□□□ -2.34
RBM39-228ENST00000471635 TRPC5OSA6NMA1 111 aa0.44□□□□□ -2.34
RBM39-228ENST00000471635 TRAPPC2LH3BP13 241 aa0.44□□□□□ -2.34
RBM39-228ENST00000471635 COX7A2LO14548 114 aa0.44□□□□□ -2.34
RBM39-228ENST00000471635 ORC5O43913 435 aa0.44□□□□□ -2.34
RBM39-228ENST00000471635 STX10O60499 249 aa0.44□□□□□ -2.34
RBM39-228ENST00000471635 CREBL2O60519 120 aaPredicted RBP0.44□□□□□ -2.34
RBM39-228ENST00000471635 APOMO95445 188 aa0.44□□□□□ -2.34
RBM39-228ENST00000471635 PPBPP02775 128 aa0.44□□□□□ -2.34
RBM39-228ENST00000471635 IL9P15248 144 aa0.44□□□□□ -2.34
RBM39-228ENST00000471635 CCR7P32248 378 aa0.44□□□□□ -2.34
RBM39-228ENST00000471635 AP1S1P61966 158 aa0.44□□□□□ -2.34
RBM39-228ENST00000471635 ANGPT1Q15389 498 aa0.44□□□□□ -2.34
RBM39-228ENST00000471635 LRRC75BQ2VPJ9 315 aa0.44□□□□□ -2.34
RBM39-228ENST00000471635 DNM1P34Q6PK57 102 aa0.44□□□□□ -2.34
RBM39-228ENST00000471635 GNPNAT1Q96EK6 184 aaPredicted RBP0.44□□□□□ -2.34
RBM39-228ENST00000471635 ANKRD36BP1Q96IX9 119 aa0.44□□□□□ -2.34
RBM39-228ENST00000471635 CCL13Q99616 98 aa0.44□□□□□ -2.34
RBM39-228ENST00000471635 EURLQ9NYK6 297 aa0.44□□□□□ -2.34
RBM39-228ENST00000471635 GREB1Q4ZG55 1949 aa0.43□□□□□ -2.34
RBM39-228ENST00000471635 TMEM269A0A1B0GVZ9 245 aa0.43□□□□□ -2.34
RBM39-228ENST00000471635 MEIS3P1A6NDR6 274 aa0.43□□□□□ -2.34
RBM39-228ENST00000471635 OR51F1A6NGY5 319 aa0.43□□□□□ -2.34
RBM39-228ENST00000471635 IBA57-AS1B1ANH7 110 aa0.43□□□□□ -2.34
RBM39-228ENST00000471635 HCRTO43612 131 aa0.43□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms