RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 MC5RP33032 325 aa7.84□□□□□ -1.15
SF3A1-207ENST00000471342 CEACAM3P40198 252 aa7.84□□□□□ -1.15
SF3A1-207ENST00000471342 NDPQ00604 133 aa7.84□□□□□ -1.15
SF3A1-207ENST00000471342 LRRC75BQ2VPJ9 315 aa7.84□□□□□ -1.15
SF3A1-207ENST00000471342 ASPHD1Q5U4P2 390 aa7.84□□□□□ -1.15
SF3A1-207ENST00000471342 CMTM1Q8IZ96 169 aa7.84□□□□□ -1.15
SF3A1-207ENST00000471342 SLC35G3Q8N808 338 aa7.84□□□□□ -1.15
SF3A1-207ENST00000471342 C5orf56Q8N8D9 126 aa7.84□□□□□ -1.15
SF3A1-207ENST00000471342 WIPF2Q8TF74 440 aaPredicted RBP7.84□□□□□ -1.15
SF3A1-207ENST00000471342 IL22RA2Q969J5 263 aa7.84□□□□□ -1.15
SF3A1-207ENST00000471342 OR10C1Q96KK4 312 aa7.84□□□□□ -1.15
SF3A1-207ENST00000471342 RBM14Q96PK6 669 aaKnown RBP7.84□□□□□ -1.15
SF3A1-207ENST00000471342 SCGB3A2Q96PL1 93 aa7.84□□□□□ -1.15
SF3A1-207ENST00000471342 RNF5Q99942 180 aa7.84□□□□□ -1.15
SF3A1-207ENST00000471342 C14orf166Q9Y224 244 aaKnown RBP7.84□□□□□ -1.15
SF3A1-207ENST00000471342 FBXO7Q9Y3I1 522 aa7.84□□□□□ -1.15
SF3A1-207ENST00000471342 RBM7Q9Y580 266 aaKnown RBP7.84□□□□□ -1.15
SF3A1-207ENST00000471342 DNHD1Q96M86 4753 aa7.84□□□□□ -1.15
SF3A1-207ENST00000471342 NF1P21359 2839 aa7.84□□□□□ -1.15
SF3A1-207ENST00000471342 SH2D7A6NKC9 451 aaPredicted RBP7.83□□□□□ -1.16
SF3A1-207ENST00000471342 CLDN34H7C241 214 aa7.83□□□□□ -1.16
SF3A1-207ENST00000471342 HPRT1P00492 218 aa7.83□□□□□ -1.16
SF3A1-207ENST00000471342 MOSP00540 346 aa7.83□□□□□ -1.16
SF3A1-207ENST00000471342 IFNA2P01563 188 aa7.83□□□□□ -1.16
SF3A1-207ENST00000471342 HLA-AP01891 365 aaKnown RBP7.83□□□□□ -1.16
SF3A1-207ENST00000471342 FBP1P09467 338 aa7.83□□□□□ -1.16
SF3A1-207ENST00000471342 IL3RAP26951 378 aa7.83□□□□□ -1.16
SF3A1-207ENST00000471342 G6PCP35575 357 aa7.83□□□□□ -1.16
SF3A1-207ENST00000471342 LGALS4P56470 323 aa7.83□□□□□ -1.16
SF3A1-207ENST00000471342 TAS2R31P59538 309 aa7.83□□□□□ -1.16
SF3A1-207ENST00000471342 UBE2KP61086 200 aa7.83□□□□□ -1.16
SF3A1-207ENST00000471342 BLCAPP62952 87 aa7.83□□□□□ -1.16
SF3A1-207ENST00000471342 HNF4GQ14541 408 aa7.83□□□□□ -1.16
SF3A1-207ENST00000471342 FCN2Q15485 313 aa7.83□□□□□ -1.16
SF3A1-207ENST00000471342 TRIM16LQ309B1 348 aa7.83□□□□□ -1.16
SF3A1-207ENST00000471342 PDLIM3Q53GG5 364 aaPredicted RBP7.83□□□□□ -1.16
SF3A1-207ENST00000471342 Q5BKY6 102 aa7.83□□□□□ -1.16
SF3A1-207ENST00000471342 GGNBP1Q5YKI7 109 aa7.83□□□□□ -1.16
SF3A1-207ENST00000471342 DHRS7BQ6IAN0 325 aaPredicted RBP7.83□□□□□ -1.16
SF3A1-207ENST00000471342 C11orf88Q6PI97 169 aa7.83□□□□□ -1.16
SF3A1-207ENST00000471342 TMEM219Q86XT9 240 aa7.83□□□□□ -1.16
SF3A1-207ENST00000471342 SGPP2Q8IWX5 399 aa7.83□□□□□ -1.16
SF3A1-207ENST00000471342 OSR1Q8TAX0 266 aaPredicted RBP7.83□□□□□ -1.16
SF3A1-207ENST00000471342 TMEM167AQ8TBQ9 72 aa7.83□□□□□ -1.16
SF3A1-207ENST00000471342 RBPMSQ93062 196 aaKnown RBP7.83□□□□□ -1.16
SF3A1-207ENST00000471342 RHOVQ96L33 236 aa7.83□□□□□ -1.16
SF3A1-207ENST00000471342 HSPB9Q9BQS6 159 aa7.83□□□□□ -1.16
SF3A1-207ENST00000471342 CHIAQ9BZP6 476 aa7.83□□□□□ -1.16
SF3A1-207ENST00000471342 MS4A7Q9GZW8 240 aaPredicted RBP7.83□□□□□ -1.16
SF3A1-207ENST00000471342 OR51J1Q9H342 316 aa7.83□□□□□ -1.16
SF3A1-207ENST00000471342 COMMD9Q9P000 198 aa7.83□□□□□ -1.16
SF3A1-207ENST00000471342 SIGLEC9Q9Y336 463 aa7.83□□□□□ -1.16
SF3A1-207ENST00000471342 TNCP24821 2201 aa7.82□□□□□ -1.16
SF3A1-207ENST00000471342 IGHV7-81A0A0B4J1V7 117 aa7.82□□□□□ -1.16
SF3A1-207ENST00000471342 DNAJC9-AS1A6NH13 148 aa7.82□□□□□ -1.16
SF3A1-207ENST00000471342 MARCH11A6NNE9 402 aa7.82□□□□□ -1.16
SF3A1-207ENST00000471342 UPK2O00526 184 aa7.82□□□□□ -1.16
SF3A1-207ENST00000471342 RRHO14718 337 aa7.82□□□□□ -1.16
SF3A1-207ENST00000471342 PRAF2O60831 178 aa7.82□□□□□ -1.16
SF3A1-207ENST00000471342 B3GALNT1O75752 331 aa7.82□□□□□ -1.16
SF3A1-207ENST00000471342 OR2F2O95006 317 aa7.82□□□□□ -1.16
SF3A1-207ENST00000471342 OR2A4O95047 310 aa7.82□□□□□ -1.16
SF3A1-207ENST00000471342 TMEM50AO95807 157 aa7.82□□□□□ -1.16
SF3A1-207ENST00000471342 RPA2P15927 270 aa7.82□□□□□ -1.16
SF3A1-207ENST00000471342 KIR2DS2P43631 304 aa7.82□□□□□ -1.16
SF3A1-207ENST00000471342 HILS1P60008 231 aa7.82□□□□□ -1.16
SF3A1-207ENST00000471342 SRSF2Q01130 221 aaKnown RBP7.82□□□□□ -1.16
SF3A1-207ENST00000471342 TAGLNQ01995 201 aaKnown RBP7.82□□□□□ -1.16
SF3A1-207ENST00000471342 CD300CQ08708 224 aa7.82□□□□□ -1.16
SF3A1-207ENST00000471342 C5orf64Q2M2E5 130 aa7.82□□□□□ -1.16
SF3A1-207ENST00000471342 TMEM268Q5VZI3 342 aa7.82□□□□□ -1.16
SF3A1-207ENST00000471342 OR4A47Q6IF82 309 aa7.82□□□□□ -1.16
SF3A1-207ENST00000471342 CCDC144NLQ6NUI1 221 aa7.82□□□□□ -1.16
SF3A1-207ENST00000471342 PRIMA1Q86XR5 153 aa7.82□□□□□ -1.16
SF3A1-207ENST00000471342 FAM219AQ8IW50 185 aa7.82□□□□□ -1.16
SF3A1-207ENST00000471342 Q8N2B8 174 aa7.82□□□□□ -1.16
SF3A1-207ENST00000471342 C12orf45Q8N5I9 185 aaPredicted RBP7.82□□□□□ -1.16
SF3A1-207ENST00000471342 CCDC71LQ8N9Z2 235 aa7.82□□□□□ -1.16
SF3A1-207ENST00000471342 TEX45Q8NA69 505 aa7.82□□□□□ -1.16
SF3A1-207ENST00000471342 OR4D5Q8NGN0 318 aa7.82□□□□□ -1.16
SF3A1-207ENST00000471342 OR4C13Q8NGP0 309 aa7.82□□□□□ -1.16
SF3A1-207ENST00000471342 OR4S2Q8NH73 311 aa7.82□□□□□ -1.16
SF3A1-207ENST00000471342 CD300LFQ8TDQ1 290 aa7.82□□□□□ -1.16
SF3A1-207ENST00000471342 CASTOR1Q8WTX7 329 aa7.82□□□□□ -1.16
SF3A1-207ENST00000471342 TMEM170AQ8WVE7 144 aa7.82□□□□□ -1.16
SF3A1-207ENST00000471342 LSM10Q969L4 123 aaKnown RBP7.82□□□□□ -1.16
SF3A1-207ENST00000471342 FLYWCH2Q96CP2 140 aaKnown RBP7.82□□□□□ -1.16
SF3A1-207ENST00000471342 OR2A7Q96R45 310 aa7.82□□□□□ -1.16
SF3A1-207ENST00000471342 FBXL15Q9H469 300 aa7.82□□□□□ -1.16
SF3A1-207ENST00000471342 TMEM14BQ9NUH8 114 aa7.82□□□□□ -1.16
SF3A1-207ENST00000471342 LIN7CQ9NUP9 197 aaKnown RBP7.82□□□□□ -1.16
SF3A1-207ENST00000471342 BET1LQ9NYM9 111 aa7.82□□□□□ -1.16
SF3A1-207ENST00000471342 CDC42EP3Q9UKI2 254 aa7.82□□□□□ -1.16
SF3A1-207ENST00000471342 NSG2Q9Y328 171 aa7.82□□□□□ -1.16
SF3A1-207ENST00000471342 FBN1P35555 2871 aaKnown RBP7.81□□□□□ -1.16
SF3A1-207ENST00000471342 TEX22C9J3V5 150 aa7.81□□□□□ -1.16
SF3A1-207ENST00000471342 H0YIZ8 118 aa7.81□□□□□ -1.16
SF3A1-207ENST00000471342 CCSO14618 274 aa7.81□□□□□ -1.16
SF3A1-207ENST00000471342 RBMXL2O75526 392 aaKnown RBP7.81□□□□□ -1.16
SF3A1-207ENST00000471342 SIX6O95475 246 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms