RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 MRGPRFQ96AM1 343 aa3.78□□□□□ -1.8
CKS1B-204ENST00000471245 OR8B2Q96RD0 313 aa3.78□□□□□ -1.8
CKS1B-204ENST00000471245 MAP1LC3CQ9BXW4 147 aa3.78□□□□□ -1.8
CKS1B-204ENST00000471245 OR2H1Q9GZK4 316 aa3.78□□□□□ -1.8
CKS1B-204ENST00000471245 TMEM38AQ9H6F2 299 aa3.78□□□□□ -1.8
CKS1B-204ENST00000471245 ARMC7Q9H6L4 198 aa3.78□□□□□ -1.8
CKS1B-204ENST00000471245 TMEM27Q9HBJ8 222 aa3.78□□□□□ -1.8
CKS1B-204ENST00000471245 SLCO1B3Q9NPD5 702 aa3.78□□□□□ -1.8
CKS1B-204ENST00000471245 ZNRD1Q9P1U0 126 aa3.78□□□□□ -1.8
CKS1B-204ENST00000471245 GOLT1BQ9Y3E0 138 aa3.78□□□□□ -1.8
CKS1B-204ENST00000471245 A0A1W2PRF3 423 aa3.77□□□□□ -1.81
CKS1B-204ENST00000471245 A0A1W2PRM7 423 aa3.77□□□□□ -1.81
CKS1B-204ENST00000471245 CENPXA8MT69 81 aa3.77□□□□□ -1.81
CKS1B-204ENST00000471245 C5orf58C9J3I9 102 aa3.77□□□□□ -1.81
CKS1B-204ENST00000471245 H3BSA7 217 aa3.77□□□□□ -1.81
CKS1B-204ENST00000471245 XKRYO14609 159 aa3.77□□□□□ -1.81
CKS1B-204ENST00000471245 PHYHO14832 338 aa3.77□□□□□ -1.81
CKS1B-204ENST00000471245 UBDO15205 165 aa3.77□□□□□ -1.81
CKS1B-204ENST00000471245 XRCC2O43543 280 aa3.77□□□□□ -1.81
CKS1B-204ENST00000471245 ENTPD5O75356 428 aa3.77□□□□□ -1.81
CKS1B-204ENST00000471245 ACSM4P0C7M7 580 aa3.77□□□□□ -1.81
CKS1B-204ENST00000471245 CD28P10747 220 aa3.77□□□□□ -1.81
CKS1B-204ENST00000471245 GPX2P18283 190 aa3.77□□□□□ -1.81
CKS1B-204ENST00000471245 GDI2P50395 445 aaKnown RBP3.77□□□□□ -1.81
CKS1B-204ENST00000471245 EMX1Q04741 257 aaPredicted RBP3.77□□□□□ -1.81
CKS1B-204ENST00000471245 CLINT1Q14677 625 aa3.77□□□□□ -1.81
CKS1B-204ENST00000471245 FAM27BQ5VT28 67 aa3.77□□□□□ -1.81
CKS1B-204ENST00000471245 OR2W3Q7Z3T1 314 aa3.77□□□□□ -1.81
CKS1B-204ENST00000471245 DPPA2Q7Z7J5 298 aa3.77□□□□□ -1.81
CKS1B-204ENST00000471245 NDUFA11Q86Y39 141 aa3.77□□□□□ -1.81
CKS1B-204ENST00000471245 PDZD9Q8IXQ8 264 aa3.77□□□□□ -1.81
CKS1B-204ENST00000471245 C19orf18Q8NEA5 215 aa3.77□□□□□ -1.81
CKS1B-204ENST00000471245 OR5B3Q8NH48 314 aa3.77□□□□□ -1.81
CKS1B-204ENST00000471245 MUC7Q8TAX7 377 aa3.77□□□□□ -1.81
CKS1B-204ENST00000471245 ZNF502Q8TBZ5 544 aa3.77□□□□□ -1.81
CKS1B-204ENST00000471245 TAMM41Q96BW9 452 aa3.77□□□□□ -1.81
CKS1B-204ENST00000471245 CMBLQ96DG6 245 aa3.77□□□□□ -1.81
CKS1B-204ENST00000471245 OR2V2Q96R30 315 aa3.77□□□□□ -1.81
CKS1B-204ENST00000471245 P2RX4Q99571 388 aa3.77□□□□□ -1.81
CKS1B-204ENST00000471245 HINT2Q9BX68 163 aa3.77□□□□□ -1.81
CKS1B-204ENST00000471245 CENPHQ9H3R5 247 aa3.77□□□□□ -1.81
CKS1B-204ENST00000471245 ZNF229Q9UJW7 825 aa3.77□□□□□ -1.81
CKS1B-204ENST00000471245 KIAA2026Q5HYC2 2103 aa3.77□□□□□ -1.81
CKS1B-204ENST00000471245 TRAPPC13A5PLN9 417 aa3.76□□□□□ -1.81
CKS1B-204ENST00000471245 TRPC5OSA6NMA1 111 aa3.76□□□□□ -1.81
CKS1B-204ENST00000471245 A8MU10 97 aa3.76□□□□□ -1.81
CKS1B-204ENST00000471245 CENPBD1B2RD01 187 aa3.76□□□□□ -1.81
CKS1B-204ENST00000471245 H7C1C5 153 aa3.76□□□□□ -1.81
CKS1B-204ENST00000471245 ZNF861PO60384 105 aa3.76□□□□□ -1.81
CKS1B-204ENST00000471245 FSTL3O95633 263 aa3.76□□□□□ -1.81
CKS1B-204ENST00000471245 CST2P09228 141 aa3.76□□□□□ -1.81
CKS1B-204ENST00000471245 FBP1P09467 338 aa3.76□□□□□ -1.81
CKS1B-204ENST00000471245 GZMMP51124 257 aa3.76□□□□□ -1.81
CKS1B-204ENST00000471245 NCALDP61601 193 aa3.76□□□□□ -1.81
CKS1B-204ENST00000471245 LCN6P62502 163 aa3.76□□□□□ -1.81
CKS1B-204ENST00000471245 ELF3P78545 371 aaPredicted RBP3.76□□□□□ -1.81
CKS1B-204ENST00000471245 PRB3Q04118 309 aaPredicted RBP3.76□□□□□ -1.81
CKS1B-204ENST00000471245 IFFO1Q0D2I5 559 aa3.76□□□□□ -1.81
CKS1B-204ENST00000471245 RSPO1Q2MKA7 263 aaPredicted RBP3.76□□□□□ -1.81
CKS1B-204ENST00000471245 LCE3CQ5T5A8 94 aa3.76□□□□□ -1.81
CKS1B-204ENST00000471245 C6orf183Q5T699 404 aa3.76□□□□□ -1.81
CKS1B-204ENST00000471245 OR2T2Q6IF00 324 aa3.76□□□□□ -1.81
CKS1B-204ENST00000471245 TTC33Q6PID6 262 aaPredicted RBP3.76□□□□□ -1.81
CKS1B-204ENST00000471245 EPGNQ6UW88 154 aa3.76□□□□□ -1.81
CKS1B-204ENST00000471245 CALHM3Q86XJ0 350 aa3.76□□□□□ -1.81
CKS1B-204ENST00000471245 OR5AS1Q8N127 324 aa3.76□□□□□ -1.81
CKS1B-204ENST00000471245 SYS1Q8N2H4 156 aa3.76□□□□□ -1.81
CKS1B-204ENST00000471245 MREGQ8N565 214 aa3.76□□□□□ -1.81
CKS1B-204ENST00000471245 OR10AD1Q8NGE0 317 aa3.76□□□□□ -1.81
CKS1B-204ENST00000471245 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.76□□□□□ -1.81
CKS1B-204ENST00000471245 ANP32BQ92688 251 aaKnown RBP3.76□□□□□ -1.81
CKS1B-204ENST00000471245 PAIP2Q9BPZ3 127 aaKnown RBP3.76□□□□□ -1.81
CKS1B-204ENST00000471245 PRRG3Q9BZD7 231 aa3.76□□□□□ -1.81
CKS1B-204ENST00000471245 TXNIPQ9H3M7 391 aa3.76□□□□□ -1.81
CKS1B-204ENST00000471245 INIPQ9NRY2 104 aa3.76□□□□□ -1.81
CKS1B-204ENST00000471245 RPUSD1Q9UJJ7 312 aaKnown RBP3.76□□□□□ -1.81
CKS1B-204ENST00000471245 ANGPT4Q9Y264 503 aa3.76□□□□□ -1.81
CKS1B-204ENST00000471245 FRAS1Q86XX4 4008 aa3.76□□□□□ -1.81
CKS1B-204ENST00000471245 A0A1B0GW55 424 aa3.75□□□□□ -1.81
CKS1B-204ENST00000471245 A0A1W2PRG6 482 aa3.75□□□□□ -1.81
CKS1B-204ENST00000471245 PRORSD1PA6NEY8 169 aa3.75□□□□□ -1.81
CKS1B-204ENST00000471245 OR6C6A6NF89 314 aa3.75□□□□□ -1.81
CKS1B-204ENST00000471245 F5H5P2 479 aa3.75□□□□□ -1.81
CKS1B-204ENST00000471245 F6UB75 175 aa3.75□□□□□ -1.81
CKS1B-204ENST00000471245 H0YHG0 523 aa3.75□□□□□ -1.81
CKS1B-204ENST00000471245 H3BUX3 64 aa3.75□□□□□ -1.81
CKS1B-204ENST00000471245 HLA-DPB1P04440 258 aa3.75□□□□□ -1.81
CKS1B-204ENST00000471245 DUX4L2P0CJ85 424 aa3.75□□□□□ -1.81
CKS1B-204ENST00000471245 DUX4L3P0CJ86 424 aa3.75□□□□□ -1.81
CKS1B-204ENST00000471245 DUX4L4P0CJ87 422 aa3.75□□□□□ -1.81
CKS1B-204ENST00000471245 DUX4L5P0CJ88 424 aa3.75□□□□□ -1.81
CKS1B-204ENST00000471245 DUX4L6P0CJ89 424 aa3.75□□□□□ -1.81
CKS1B-204ENST00000471245 DUX4L7P0CJ90 424 aa3.75□□□□□ -1.81
CKS1B-204ENST00000471245 RCC1P18754 421 aaPredicted RBP3.75□□□□□ -1.81
CKS1B-204ENST00000471245 MTPNP58546 118 aa3.75□□□□□ -1.81
CKS1B-204ENST00000471245 ARF6P62330 175 aa3.75□□□□□ -1.81
CKS1B-204ENST00000471245 SLC35A2P78381 396 aa3.75□□□□□ -1.81
CKS1B-204ENST00000471245 UNC119Q13432 240 aa3.75□□□□□ -1.81
CKS1B-204ENST00000471245 ZNF726P1Q15940 193 aa3.75□□□□□ -1.81
CKS1B-204ENST00000471245 GUCA2BQ16661 112 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms