RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 ARPC5O15511 151 aa7.45□□□□□ -1.22
PTPRE-207ENST00000471218 TNFSF12O43508 249 aa7.45□□□□□ -1.22
PTPRE-207ENST00000471218 BCL2L11O43521 198 aa7.45□□□□□ -1.22
PTPRE-207ENST00000471218 PROP1O75360 226 aa7.45□□□□□ -1.22
PTPRE-207ENST00000471218 HRASP01112 189 aa7.45□□□□□ -1.22
PTPRE-207ENST00000471218 IFNA7P01567 189 aa7.45□□□□□ -1.22
PTPRE-207ENST00000471218 MBPP02686 304 aaPredicted RBP7.45□□□□□ -1.22
PTPRE-207ENST00000471218 LYNX1P0DP58 116 aa7.45□□□□□ -1.22
PTPRE-207ENST00000471218 CCL3L1P16619 93 aa7.45□□□□□ -1.22
PTPRE-207ENST00000471218 OMGP23515 440 aa7.45□□□□□ -1.22
PTPRE-207ENST00000471218 CEACAM3P40198 252 aa7.45□□□□□ -1.22
PTPRE-207ENST00000471218 AP2S1P53680 142 aaPredicted RBP7.45□□□□□ -1.22
PTPRE-207ENST00000471218 ATP5IP56385 69 aaPredicted RBP7.45□□□□□ -1.22
PTPRE-207ENST00000471218 RPL30P62888 115 aaKnown RBP7.45□□□□□ -1.22
PTPRE-207ENST00000471218 RAB32Q13637 225 aa7.45□□□□□ -1.22
PTPRE-207ENST00000471218 NDUFA5Q16718 116 aa7.45□□□□□ -1.22
PTPRE-207ENST00000471218 Q5BKY6 102 aa7.45□□□□□ -1.22
PTPRE-207ENST00000471218 AVPI1Q5T686 147 aa7.45□□□□□ -1.22
PTPRE-207ENST00000471218 C5orf24Q7Z6I8 188 aa7.45□□□□□ -1.22
PTPRE-207ENST00000471218 PDPNQ86YL7 162 aa7.45□□□□□ -1.22
PTPRE-207ENST00000471218 ODF3L1Q8IXM7 274 aa7.45□□□□□ -1.22
PTPRE-207ENST00000471218 LYG1Q8N1E2 194 aa7.45□□□□□ -1.22
PTPRE-207ENST00000471218 ABHD12Q8N2K0 398 aa7.45□□□□□ -1.22
PTPRE-207ENST00000471218 OR5AN1Q8NGI8 311 aa7.45□□□□□ -1.22
PTPRE-207ENST00000471218 RNASE11Q8TAA1 199 aaKnown RBP7.45□□□□□ -1.22
PTPRE-207ENST00000471218 STOML3Q8TAV4 291 aa7.45□□□□□ -1.22
PTPRE-207ENST00000471218 ZNF418Q8TF45 676 aaPredicted RBP7.45□□□□□ -1.22
PTPRE-207ENST00000471218 CIB3Q96Q77 187 aaPredicted RBP7.45□□□□□ -1.22
PTPRE-207ENST00000471218 RNF5Q99942 180 aa7.45□□□□□ -1.22
PTPRE-207ENST00000471218 RNF126Q9BV68 326 aa7.45□□□□□ -1.22
PTPRE-207ENST00000471218 SLC25A31Q9H0C2 315 aa7.45□□□□□ -1.22
PTPRE-207ENST00000471218 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.45□□□□□ -1.22
PTPRE-207ENST00000471218 GSKIPQ9P0R6 139 aa7.45□□□□□ -1.22
PTPRE-207ENST00000471218 RNF150Q9ULK6 438 aa7.45□□□□□ -1.22
PTPRE-207ENST00000471218 IGHV2-26A0A0B4J1V2 119 aa7.44□□□□□ -1.22
PTPRE-207ENST00000471218 RNF222A6NCQ9 220 aa7.44□□□□□ -1.22
PTPRE-207ENST00000471218 MARCH11A6NNE9 402 aa7.44□□□□□ -1.22
PTPRE-207ENST00000471218 LINC00473A8K010 186 aa7.44□□□□□ -1.22
PTPRE-207ENST00000471218 MPTX1A8MV57 137 aa7.44□□□□□ -1.22
PTPRE-207ENST00000471218 B4DSR2 109 aa7.44□□□□□ -1.22
PTPRE-207ENST00000471218 C22orf46C9J442 243 aa7.44□□□□□ -1.22
PTPRE-207ENST00000471218 WRBO00258 174 aa7.44□□□□□ -1.22
PTPRE-207ENST00000471218 IGKV1-39P01597 117 aa7.44□□□□□ -1.22
PTPRE-207ENST00000471218 IGKV1-5P01602 117 aa7.44□□□□□ -1.22
PTPRE-207ENST00000471218 GAPDHP04406 335 aaKnown RBP7.44□□□□□ -1.22
PTPRE-207ENST00000471218 IGKV1D-39P04432 117 aa7.44□□□□□ -1.22
PTPRE-207ENST00000471218 CXCL2P19875 107 aa7.44□□□□□ -1.22
PTPRE-207ENST00000471218 GATA3P23771 443 aa7.44□□□□□ -1.22
PTPRE-207ENST00000471218 LPAR6P43657 344 aa7.44□□□□□ -1.22
PTPRE-207ENST00000471218 DVL1P1P54792 670 aaPredicted RBP7.44□□□□□ -1.22
PTPRE-207ENST00000471218 LMO4P61968 165 aa7.44□□□□□ -1.22
PTPRE-207ENST00000471218 UBA52P62987 128 aaKnown RBP7.44□□□□□ -1.22
PTPRE-207ENST00000471218 PAX2Q02962 417 aa7.44□□□□□ -1.22
PTPRE-207ENST00000471218 ZNF816Q0VGE8 651 aaPredicted RBP7.44□□□□□ -1.22
PTPRE-207ENST00000471218 OPCMLQ14982 345 aa7.44□□□□□ -1.22
PTPRE-207ENST00000471218 HLA-DRB5Q30154 266 aa7.44□□□□□ -1.22
PTPRE-207ENST00000471218 MINOS1Q5TGZ0 78 aa7.44□□□□□ -1.22
PTPRE-207ENST00000471218 CCDC144NLQ6NUI1 221 aa7.44□□□□□ -1.22
PTPRE-207ENST00000471218 TMUB2Q71RG4 321 aa7.44□□□□□ -1.22
PTPRE-207ENST00000471218 H2BFWTQ7Z2G1 175 aa7.44□□□□□ -1.22
PTPRE-207ENST00000471218 ZNF429Q86V71 674 aa7.44□□□□□ -1.22
PTPRE-207ENST00000471218 OR8H3Q8N146 312 aa7.44□□□□□ -1.22
PTPRE-207ENST00000471218 STPG2Q8N412 459 aa7.44□□□□□ -1.22
PTPRE-207ENST00000471218 OR4A5Q8NH83 315 aa7.44□□□□□ -1.22
PTPRE-207ENST00000471218 VSTM2AQ8TAG5 236 aa7.44□□□□□ -1.22
PTPRE-207ENST00000471218 DCUN1D4Q92564 292 aa7.44□□□□□ -1.22
PTPRE-207ENST00000471218 BPESC1Q9GZL8 116 aa7.44□□□□□ -1.22
PTPRE-207ENST00000471218 ARL6Q9H0F7 186 aa7.44□□□□□ -1.22
PTPRE-207ENST00000471218 HSPB7Q9UBY9 170 aa7.44□□□□□ -1.22
PTPRE-207ENST00000471218 MINOS1-NBL1R4GNA1 71 aa7.44□□□□□ -1.22
PTPRE-207ENST00000471218 IGHV4-61A0A0C4DH41 118 aa7.43□□□□□ -1.22
PTPRE-207ENST00000471218 IGHV2-70DA0A0C4DH43 119 aa7.43□□□□□ -1.22
PTPRE-207ENST00000471218 H0YIZ8 118 aa7.43□□□□□ -1.22
PTPRE-207ENST00000471218 SLC31A2O15432 143 aa7.43□□□□□ -1.22
PTPRE-207ENST00000471218 FCGR3BO75015 233 aa7.43□□□□□ -1.22
PTPRE-207ENST00000471218 TSC22D2O75157 780 aa7.43□□□□□ -1.22
PTPRE-207ENST00000471218 MMP23AO75900 390 aa7.43□□□□□ -1.22
PTPRE-207ENST00000471218 S1PR2O95136 353 aa7.43□□□□□ -1.22
PTPRE-207ENST00000471218 EPHA1P21709 976 aa7.43□□□□□ -1.22
PTPRE-207ENST00000471218 LGALS7P47929 136 aa7.43□□□□□ -1.22
PTPRE-207ENST00000471218 COMPP49747 757 aaPredicted RBP7.43□□□□□ -1.22
PTPRE-207ENST00000471218 BRWD1-AS2P59051 145 aa7.43□□□□□ -1.22
PTPRE-207ENST00000471218 S100A10P60903 97 aa7.43□□□□□ -1.22
PTPRE-207ENST00000471218 LTC4SQ16873 150 aa7.43□□□□□ -1.22
PTPRE-207ENST00000471218 LRRC37A5PQ49AS3 106 aa7.43□□□□□ -1.22
PTPRE-207ENST00000471218 TMEM177Q53S58 311 aa7.43□□□□□ -1.22
PTPRE-207ENST00000471218 EIF5AL1Q6IS14 154 aaKnown RBP7.43□□□□□ -1.22
PTPRE-207ENST00000471218 TEX261Q6UWH6 196 aa7.43□□□□□ -1.22
PTPRE-207ENST00000471218 BTNL3Q6UXE8 466 aa7.43□□□□□ -1.22
PTPRE-207ENST00000471218 TGIF2LXQ8IUE1 241 aa7.43□□□□□ -1.22
PTPRE-207ENST00000471218 PUSL1Q8N0Z8 303 aaKnown RBP7.43□□□□□ -1.22
PTPRE-207ENST00000471218 C3orf56Q8N813 242 aa7.43□□□□□ -1.22
PTPRE-207ENST00000471218 OR4C13Q8NGP0 309 aa7.43□□□□□ -1.22
PTPRE-207ENST00000471218 OR1S1Q8NH92 325 aa7.43□□□□□ -1.22
PTPRE-207ENST00000471218 GPR146Q96CH1 333 aa7.43□□□□□ -1.22
PTPRE-207ENST00000471218 R3HDM4Q96D70 268 aa7.43□□□□□ -1.22
PTPRE-207ENST00000471218 C1orf159Q96HA4 380 aa7.43□□□□□ -1.22
PTPRE-207ENST00000471218 SMIM8Q96KF7 97 aa7.43□□□□□ -1.22
PTPRE-207ENST00000471218 ARPC5LQ9BPX5 153 aa7.43□□□□□ -1.22
PTPRE-207ENST00000471218 C11orf1Q9H5F2 150 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms